RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 NSD1Q96L73 2696 aaPredicted RBP3.37□□□□□ -1.87
SRP54-212ENST00000556992 CUBNO60494 3623 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 IGHV3OR16-13A0A075B7E8 117 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 IGHV3-49A0A0A0MS15 119 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 IGHV3-74A0A0B4J1X5 117 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 TRAV8-2A0A0B4J237 113 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 ZNF705FA8MVS1 300 aaPredicted RBP3.36□□□□□ -1.87
SRP54-212ENST00000556992 SNURFLB1AK76 121 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 M0QZ24 198 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 SPINK4O60575 86 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 CA1P00915 261 aaPredicted RBP3.36□□□□□ -1.87
SRP54-212ENST00000556992 TRBV12-3P01733 135 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 LGALS1P09382 135 aaKnown RBP3.36□□□□□ -1.87
SRP54-212ENST00000556992 SMIM6P0DI80 62 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 CRIP1P50238 77 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 PAFAH1B2P68402 229 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 HBBP68871 147 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 OR10J3Q5JRS4 329 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 MRPL54Q6P161 138 aaKnown RBP3.36□□□□□ -1.87
SRP54-212ENST00000556992 UNQ9165/PRO28630Q6UXU0 137 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 LINC00322Q6ZN03 302 aaPredicted RBP3.36□□□□□ -1.87
SRP54-212ENST00000556992 BAGE3Q86Y29 109 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 OR10J6PQ8NGY7 276 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 MYOZ3Q8TDC0 251 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 GTSF1Q8WW33 167 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 TMEM18Q96B42 140 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 ZC2HC1AQ96GY0 325 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 PGLYRP4Q96LB8 373 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 VGLL1Q99990 258 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 GPR61Q9BZJ8 451 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 AGPAT4-IT1Q9H0P7 198 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 ZNF702PQ9H963 129 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 NRN1Q9NPD7 142 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 TMEM160Q9NX00 188 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 LENEPQ9Y5L5 61 aa3.36□□□□□ -1.87
SRP54-212ENST00000556992 RAI1Q7Z5J4 1906 aaPredicted RBP3.36□□□□□ -1.87
SRP54-212ENST00000556992 IGKV2-40A0A087WW87 121 aaPredicted RBP3.35□□□□□ -1.87
SRP54-212ENST00000556992 TRBV7-9A0A0J9YWB2 115 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 A0A1B0GUT8 65 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 A0A1B0GXF2 115 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 PRAC2D3DTV9 90 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 F2Z2F3 143 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 PRYO14603 147 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 SH2D1AO60880 128 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 IGKV2D-40P01614 121 aaPredicted RBP3.35□□□□□ -1.87
SRP54-212ENST00000556992 ORM1P02763 201 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 ESDP10768 282 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 FABP4P15090 132 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 CAMPP49913 170 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 HIST1H1AQ02539 215 aaPredicted RBP3.35□□□□□ -1.87
SRP54-212ENST00000556992 ERCC8Q13216 396 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 KLF5Q13887 457 aaPredicted RBP3.35□□□□□ -1.87
SRP54-212ENST00000556992 DNLZQ5SXM8 178 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 TCF24Q7RTU0 167 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 RNF182Q8N6D2 247 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 KLHDC1Q8N7A1 406 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 ZNF738Q8NE65 137 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 OR10D4PQ8NGN7 298 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 OR1N2Q8NGR9 330 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 PACRGQ96M98 296 aaPredicted RBP3.35□□□□□ -1.87
SRP54-212ENST00000556992 C12orf57Q99622 126 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 HIST1H2BLQ99880 126 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 AKAP6Q13023 2319 aa3.35□□□□□ -1.87
SRP54-212ENST00000556992 FN1P02751 2386 aaKnown RBP3.34□□□□□ -1.87
SRP54-212ENST00000556992 PKD1L1Q8TDX9 2849 aa3.34□□□□□ -1.87
SRP54-212ENST00000556992 TNCP24821 2201 aa3.34□□□□□ -1.87
SRP54-212ENST00000556992 MED13LQ71F56 2210 aa3.34□□□□□ -1.87
SRP54-212ENST00000556992 SOCS3O14543 225 aa3.34□□□□□ -1.87
SRP54-212ENST00000556992 FRMD6-AS1P0C7T7 363 aa3.34□□□□□ -1.87
SRP54-212ENST00000556992 HLA-DMBP28068 263 aa3.34□□□□□ -1.87
SRP54-212ENST00000556992 HOXD3P31249 432 aaPredicted RBP3.34□□□□□ -1.87
SRP54-212ENST00000556992 SNRPD3P62318 126 aaKnown RBP3.34□□□□□ -1.87
SRP54-212ENST00000556992 TMEM95Q3KNT9 176 aa3.34□□□□□ -1.87
SRP54-212ENST00000556992 PDZD11Q5EBL8 140 aa3.34□□□□□ -1.87
SRP54-212ENST00000556992 LYZL1Q6UWQ5 148 aa3.34□□□□□ -1.87
SRP54-212ENST00000556992 IL17RELQ6ZVW7 336 aa3.34□□□□□ -1.87
SRP54-212ENST00000556992 ZNF418Q8TF45 676 aaPredicted RBP3.34□□□□□ -1.87
SRP54-212ENST00000556992 C4orf3Q8WVX3 66 aa3.34□□□□□ -1.87
SRP54-212ENST00000556992 ALKBH7Q9BT30 221 aaPredicted RBP3.34□□□□□ -1.87
SRP54-212ENST00000556992 C16orf95Q9H693 158 aa3.34□□□□□ -1.87
SRP54-212ENST00000556992 PEMTQ9UBM1 199 aa3.34□□□□□ -1.87
SRP54-212ENST00000556992 ACANP16112 2415 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 YLPM1P49750 1951 aaKnown RBP3.33□□□□□ -1.88
SRP54-212ENST00000556992 LOC102724200A0A096LPH7 203 aaPredicted RBP3.33□□□□□ -1.88
SRP54-212ENST00000556992 TRAV2A0A0B4J234 112 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 TMEM213A2RRL7 107 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 LINC01619G3V211 115 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 AMBPP02760 352 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 GPX1P07203 203 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 GZMBP10144 247 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 SRIP30626 198 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 ZNF80P51504 273 aaPredicted RBP3.33□□□□□ -1.88
SRP54-212ENST00000556992 SYNJ2BPP57105 145 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 S100A12P80511 92 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 SLAQ13239 276 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 PIK3CD-AS1Q5SR53 167 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 GDF5OSQ5U4N7 250 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 C10orf99Q6UWK7 81 aa3.33□□□□□ -1.88
SRP54-212ENST00000556992 ZNF493Q6ZR52 646 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms