RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 GPR132Q9UNW8 380 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 V9GYH0 126 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 A0A087X0K7 114 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 TRAV4A0A0B4J268 109 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 LOC100131303A0A0U1RQF7 123 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 ATP6V1G1O75348 118 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 UPK1BO75841 260 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 HOXB5P09067 269 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 CT45A10P0DMU9 189 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 CXCL2P19875 107 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 KRTAP10-6P60371 365 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-245ENST00000556958 RND3P61587 244 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 RAB31Q13636 194 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 GUK1Q16774 197 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 AARDQ4LEZ3 155 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 NMSQ5H8A3 153 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 LHFPL1Q86WI0 220 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 OR1S1Q8NH92 325 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 GLYATL2Q8WU03 294 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 UBE2WQ96B02 151 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 SLC50A1Q9BRV3 221 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 SPXQ9BT56 116 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 SRRQ9GZT4 340 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 TMEM222Q9H0R3 208 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 FLVCR2Q9UPI3 526 aa3.56□□□□□ -1.84
ATXN3-245ENST00000556958 IGHV3-64A0A075B6Q5 118 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 TRAV6A0A075B6T7 132 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 A0A087WWC5 75 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 NAP1L6A6NFF2 107 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 USP17L23D6RBM5 183 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 CDS2O95674 445 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 PRSS1P07477 247 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 IL7P13232 177 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 ANXA7P20073 488 aaKnown RBP3.55□□□□□ -1.84
ATXN3-245ENST00000556958 RNASE4P34096 147 aaKnown RBP3.55□□□□□ -1.84
ATXN3-245ENST00000556958 SURF2Q15527 256 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-245ENST00000556958 MZT2BQ6NZ67 158 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 KCNIP4Q6PIL6 250 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 ATRAIDQ6UW56 229 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 LCN15Q6UWW0 184 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 LYZL2Q7Z4W2 148 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 TMEM170AQ8WVE7 144 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 SLC25A21Q9BQT8 299 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-245ENST00000556958 SHANK2-AS3Q9BTD1 123 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 ZNF331Q9NQX6 463 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-245ENST00000556958 GSKIPQ9P0R6 139 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 KLK12Q9UKR0 248 aa3.55□□□□□ -1.84
ATXN3-245ENST00000556958 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-245ENST00000556958 A0A0G2JRQ6 117 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 FAM240BA0A1B0GVZ2 78 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 PGPA6NDG6 321 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 FAM25EA8MYX2 175 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 H3BRN7 92 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 LYRM1O43325 122 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 CIDEAO60543 219 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 B3GALNT1O75752 331 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 SFT2D2O95562 160 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 GPX1P07203 203 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 SULT1A3P0DMM9 295 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 SULT1A4P0DMN0 295 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 GATA1P15976 413 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-245ENST00000556958 VAMP2P63027 116 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 PPP1R1AQ13522 171 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 OPCMLQ14982 345 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 RHOHQ15669 191 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 TMEM128Q5BJH2 165 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 Q6ZRP5 223 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 LHFPL5Q8TAF8 219 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 SPACA4Q8TDM5 124 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 LINC00477Q96M19 166 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 SDHCQ99643 169 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-245ENST00000556958 RBKSQ9H477 322 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 TP53TG3Q9ULZ0 132 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 HIGD1AQ9Y241 93 aa3.54□□□□□ -1.84
ATXN3-245ENST00000556958 A0A087WX48 190 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 TRBV6-4A0A1B0GX49 114 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 C9orf170A2RU37 121 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 C5orf51A6NDU8 294 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 KLLNB2CW77 178 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 PRAC2D3DTV9 90 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 WRBO00258 174 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 PLA2G10O15496 165 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 HYPMO75409 117 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 NDUFB6O95139 128 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 TCRBP04435 133 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 NMBP08949 121 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 OR4E1P0C645 316 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 IAPPP10997 89 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 UBE2MP61081 183 aaKnown RBP3.53□□□□□ -1.84
ATXN3-245ENST00000556958 POLR2GP62487 172 aaKnown RBP eCLIP3.53□□□□□ -1.84
ATXN3-245ENST00000556958 CNBPP62633 177 aaKnown RBP3.53□□□□□ -1.84
ATXN3-245ENST00000556958 RPP30P78346 268 aaKnown RBP3.53□□□□□ -1.84
ATXN3-245ENST00000556958 SRPXP78539 464 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 SMCO1Q147U7 214 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 PXDC1Q5TGL8 231 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 AKAP14Q86UN6 197 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 NIT1Q86X76 327 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 SLC25A29Q8N8R3 303 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 ENKURQ8TC29 256 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 CHCHD7Q9BUK0 85 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms