RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 ERCC8Q13216 396 aa9.18□□□□□ -0.94
PSEN1-219ENST00000556951 TMEM78Q5T7P6 136 aa9.18□□□□□ -0.94
PSEN1-219ENST00000556951 TMEM88Q6PEY1 159 aa9.18□□□□□ -0.94
PSEN1-219ENST00000556951 FAM231DQ6ZW35 169 aa9.18□□□□□ -0.94
PSEN1-219ENST00000556951 COX8CQ7Z4L0 72 aa9.18□□□□□ -0.94
PSEN1-219ENST00000556951 CBLN2Q8IUK8 224 aa9.18□□□□□ -0.94
PSEN1-219ENST00000556951 NDFIP1Q9BT67 221 aa9.18□□□□□ -0.94
PSEN1-219ENST00000556951 AGPAT4-IT1Q9H0P7 198 aa9.18□□□□□ -0.94
PSEN1-219ENST00000556951 C11orf68Q9H3H3 251 aaKnown RBP9.18□□□□□ -0.94
PSEN1-219ENST00000556951 ZNF492Q9P255 531 aa9.18□□□□□ -0.94
PSEN1-219ENST00000556951 NPIPB6E9PJ23 425 aa9.17□□□□□ -0.94
PSEN1-219ENST00000556951 DEFB4AO15263 64 aa9.17□□□□□ -0.94
PSEN1-219ENST00000556951 PRB4P10163 310 aaPredicted RBP9.17□□□□□ -0.94
PSEN1-219ENST00000556951 ZNF124Q15973 351 aa9.17□□□□□ -0.94
PSEN1-219ENST00000556951 OR8A1Q8NGG7 326 aa9.17□□□□□ -0.94
PSEN1-219ENST00000556951 CSTL1Q9H114 145 aa9.17□□□□□ -0.94
PSEN1-219ENST00000556951 OR4C46A6NHA9 309 aa9.16□□□□□ -0.94
PSEN1-219ENST00000556951 ZNF688P0C7X2 276 aa9.16□□□□□ -0.94
PSEN1-219ENST00000556951 PSMG4Q5JS54 123 aa9.16□□□□□ -0.94
PSEN1-219ENST00000556951 IBA57Q5T440 356 aaKnown RBP9.16□□□□□ -0.94
PSEN1-219ENST00000556951 APRG1Q8IVJ8 170 aa9.16□□□□□ -0.94
PSEN1-219ENST00000556951 FAM24BQ8N5W8 94 aa9.16□□□□□ -0.94
PSEN1-219ENST00000556951 OR11H2Q8NH07 326 aa9.16□□□□□ -0.94
PSEN1-219ENST00000556951 DAZAP1Q96EP5 407 aaKnown RBP9.16□□□□□ -0.94
PSEN1-219ENST00000556951 IMMP2LQ96T52 175 aa9.16□□□□□ -0.94
PSEN1-219ENST00000556951 RNASE7Q9H1E1 156 aaKnown RBP9.16□□□□□ -0.94
PSEN1-219ENST00000556951 LENEPQ9Y5L5 61 aa9.16□□□□□ -0.94
PSEN1-219ENST00000556951 TRBV7-9A0A0J9YWB2 115 aa9.15□□□□□ -0.94
PSEN1-219ENST00000556951 GATCO43716 136 aaKnown RBP9.15□□□□□ -0.94
PSEN1-219ENST00000556951 RBMY1CP0DJD4 496 aa9.15□□□□□ -0.94
PSEN1-219ENST00000556951 INAFM2P0DMQ5 153 aa9.15□□□□□ -0.94
PSEN1-219ENST00000556951 CT45A10P0DMU9 189 aa9.15□□□□□ -0.94
PSEN1-219ENST00000556951 S100PP25815 95 aa9.15□□□□□ -0.94
PSEN1-219ENST00000556951 CMC4P56277 68 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-219ENST00000556951 HIST1H1AQ02539 215 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-219ENST00000556951 SMUG1Q53HV7 270 aa9.15□□□□□ -0.94
PSEN1-219ENST00000556951 PRR27Q6MZM9 219 aa9.15□□□□□ -0.94
PSEN1-219ENST00000556951 EBLN2Q6P2I7 272 aa9.15□□□□□ -0.94
PSEN1-219ENST00000556951 NUDT10Q8NFP7 164 aa9.15□□□□□ -0.94
PSEN1-219ENST00000556951 NUDT11Q96G61 164 aa9.15□□□□□ -0.94
PSEN1-219ENST00000556951 ZC2HC1AQ96GY0 325 aa9.15□□□□□ -0.94
PSEN1-219ENST00000556951 DNAH5Q8TE73 4624 aa9.15□□□□□ -0.94
PSEN1-219ENST00000556951 C19orf71A6NCJ1 209 aa9.14□□□□□ -0.95
PSEN1-219ENST00000556951 ZNF705GA8MUZ8 300 aaPredicted RBP9.14□□□□□ -0.95
PSEN1-219ENST00000556951 DUSP14O95147 198 aaKnown RBP9.14□□□□□ -0.95
PSEN1-219ENST00000556951 P01737 135 aa9.14□□□□□ -0.95
PSEN1-219ENST00000556951 ZNF705DP0CH99 300 aaPredicted RBP9.14□□□□□ -0.95
PSEN1-219ENST00000556951 ZNF705BP0CI00 300 aaPredicted RBP9.14□□□□□ -0.95
PSEN1-219ENST00000556951 KCNIP4Q6PIL6 250 aa9.14□□□□□ -0.95
PSEN1-219ENST00000556951 FOXI2Q6ZQN5 318 aa9.14□□□□□ -0.95
PSEN1-219ENST00000556951 Q8TAT8 98 aa9.14□□□□□ -0.95
PSEN1-219ENST00000556951 C8orf49Q96NF6 230 aa9.14□□□□□ -0.95
PSEN1-219ENST00000556951 YPEL4Q96NS1 127 aa9.14□□□□□ -0.95
PSEN1-219ENST00000556951 V9GYV3 84 aa9.14□□□□□ -0.95
PSEN1-219ENST00000556951 A0A0J9YX75 114 aa9.13□□□□□ -0.95
PSEN1-219ENST00000556951 COLCA2A8K830 154 aa9.13□□□□□ -0.95
PSEN1-219ENST00000556951 F6UB75 175 aa9.13□□□□□ -0.95
PSEN1-219ENST00000556951 PFN1P07737 140 aaKnown RBP9.13□□□□□ -0.95
PSEN1-219ENST00000556951 CRIP1P50238 77 aa9.13□□□□□ -0.95
PSEN1-219ENST00000556951 FAM162BQ5T6X4 162 aa9.13□□□□□ -0.95
PSEN1-219ENST00000556951 OR4B1Q8NGF8 309 aa9.13□□□□□ -0.95
PSEN1-219ENST00000556951 C18orf15Q96N68 181 aa9.13□□□□□ -0.95
PSEN1-219ENST00000556951 SAV1Q9H4B6 383 aaPredicted RBP9.13□□□□□ -0.95
PSEN1-219ENST00000556951 IL36BQ9NZH7 164 aa9.13□□□□□ -0.95
PSEN1-219ENST00000556951 FABP5P3A8MUU1 101 aa9.12□□□□□ -0.95
PSEN1-219ENST00000556951 DEFB131AP59861 70 aa9.12□□□□□ -0.95
PSEN1-219ENST00000556951 DEFB1P60022 68 aa9.12□□□□□ -0.95
PSEN1-219ENST00000556951 ELOBQ15370 118 aa9.12□□□□□ -0.95
PSEN1-219ENST00000556951 CT83Q5H943 113 aa9.12□□□□□ -0.95
PSEN1-219ENST00000556951 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.12□□□□□ -0.95
PSEN1-219ENST00000556951 Q8NAQ8 132 aa9.12□□□□□ -0.95
PSEN1-219ENST00000556951 FAM19A4Q96LR4 140 aa9.12□□□□□ -0.95
PSEN1-219ENST00000556951 ODF3Q96PU9 254 aa9.12□□□□□ -0.95
PSEN1-219ENST00000556951 RPP21Q9H633 154 aaKnown RBP9.12□□□□□ -0.95
PSEN1-219ENST00000556951 IGHV4-4A0A075B6R2 117 aa9.11□□□□□ -0.95
PSEN1-219ENST00000556951 TRAV9-1A0A075B6T8 112 aa9.11□□□□□ -0.95
PSEN1-219ENST00000556951 M0R2N4 97 aa9.11□□□□□ -0.95
PSEN1-219ENST00000556951 SH2D1AO60880 128 aa9.11□□□□□ -0.95
PSEN1-219ENST00000556951 CRISP2P16562 243 aa9.11□□□□□ -0.95
PSEN1-219ENST00000556951 LEPP41159 167 aa9.11□□□□□ -0.95
PSEN1-219ENST00000556951 POM121L12Q8N7R1 296 aa9.11□□□□□ -0.95
PSEN1-219ENST00000556951 BTF3L4Q96K17 158 aa9.11□□□□□ -0.95
PSEN1-219ENST00000556951 URGCP-MRPS24S4R325 110 aa9.11□□□□□ -0.95
PSEN1-219ENST00000556951 TRBV24-1A0A075B6N3 115 aa9.1□□□□□ -0.95
PSEN1-219ENST00000556951 SMIM27A0A1W2PRY6 76 aa9.1□□□□□ -0.95
PSEN1-219ENST00000556951 A8MWL6 223 aa9.1□□□□□ -0.95
PSEN1-219ENST00000556951 ZNF80P51504 273 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-219ENST00000556951 GDF5OSQ5U4N7 250 aa9.1□□□□□ -0.95
PSEN1-219ENST00000556951 OR2D3Q8NGH3 330 aa9.1□□□□□ -0.95
PSEN1-219ENST00000556951 TSKUQ8WUA8 353 aa9.1□□□□□ -0.95
PSEN1-219ENST00000556951 PYGO2Q9BRQ0 406 aa9.1□□□□□ -0.95
PSEN1-219ENST00000556951 RNF213Q63HN8 5207 aa9.1□□□□□ -0.95
PSEN1-219ENST00000556951 TGIF2-C20orf24A0A0A6YYL0 155 aa9.09□□□□□ -0.95
PSEN1-219ENST00000556951 TMEM189A5PLL7 270 aa9.09□□□□□ -0.95
PSEN1-219ENST00000556951 FAM231BA6NCW3 169 aa9.09□□□□□ -0.95
PSEN1-219ENST00000556951 GIG44P09565 113 aaPredicted RBP9.09□□□□□ -0.95
PSEN1-219ENST00000556951 HLA-DRB4P13762 266 aa9.09□□□□□ -0.95
PSEN1-219ENST00000556951 TSPOP30536 169 aa9.09□□□□□ -0.95
PSEN1-219ENST00000556951 FAM3BP58499 235 aaPredicted RBP9.09□□□□□ -0.95
PSEN1-219ENST00000556951 RPS20P60866 119 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms