RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 SOHLH1Q5JUK2 328 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 TMEM78Q5T7P6 136 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 SAMD13Q5VXD3 122 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 PRR27Q6MZM9 219 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 ATRAIDQ6UW56 229 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 C9orf47Q6ZRZ4 202 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 TRPT1Q86TN4 253 aaKnown RBP3.87□□□□□ -1.79
ATXN3-244ENST00000556898 BAGE2Q86Y30 109 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 ZFAND2AQ8N6M9 145 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 ZC2HC1AQ96GY0 325 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 SMDT1Q9H4I9 107 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 SRD5A3Q9H8P0 318 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 SDF2L1Q9HCN8 221 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 NAT8Q9UHE5 227 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 HLA-DRB4X5D2U9 266 aa3.87□□□□□ -1.79
ATXN3-244ENST00000556898 TENM2Q9NT68 2774 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 SACSQ9NZJ4 4579 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 TMSB15BA0A087X1C1 80 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 K7EQM0 130 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 CRXO43186 299 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-244ENST00000556898 SPRY2O43597 315 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 DUSP14O95147 198 aaKnown RBP3.86□□□□□ -1.79
ATXN3-244ENST00000556898 GCGP01275 180 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 APOC3P02656 99 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 GIG44P09565 113 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-244ENST00000556898 RNASE4P34096 147 aaKnown RBP3.86□□□□□ -1.79
ATXN3-244ENST00000556898 RPL19P84098 196 aaKnown RBP3.86□□□□□ -1.79
ATXN3-244ENST00000556898 TMEM241Q24JQ0 296 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 C10orf91Q5T1B1 145 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 GFI1BQ5VTD9 330 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 LINC01551Q86U37 167 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 GTSCR1Q86UQ5 136 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 STHQ8IWL8 128 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 TMEM183AQ8IXX5 376 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 FMC1Q96HJ9 113 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 LINC00477Q96M19 166 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 TCEAL7Q9BRU2 100 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 RNASE7Q9H1E1 156 aaKnown RBP3.86□□□□□ -1.79
ATXN3-244ENST00000556898 PPP1R14DQ9NXH3 145 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 XCL2Q9UBD3 114 aa3.86□□□□□ -1.79
ATXN3-244ENST00000556898 TRAV12-3A0A0B4J271 114 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 SERTM2A0A1B0GWG4 89 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 GRIFINA4D1Z8 144 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 A8MTW9 85 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 C9JCJ5 164 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 M0R036 132 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 SH2D1AO60880 128 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 NDUFS6O75380 124 aaKnown RBP3.85□□□□□ -1.79
ATXN3-244ENST00000556898 SCO1O75880 301 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 CA1P00915 261 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-244ENST00000556898 S100A9P06702 114 aaKnown RBP3.85□□□□□ -1.79
ATXN3-244ENST00000556898 GPX1P07203 203 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 IGHV4-30-4P0DP06 118 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 GZMBP10144 247 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 CRISP2P16562 243 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 LEPP41159 167 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 CMC4P56277 68 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-244ENST00000556898 FAM74A3Q4VXF1 159 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 MUC21Q5SSG8 566 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 C1orf158Q8N1D5 194 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 ARL6IP6Q8N6S5 226 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 ISOC2Q96AB3 205 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 SEC11CQ9BY50 192 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 TP53TG3Q9ULZ0 132 aa3.85□□□□□ -1.79
ATXN3-244ENST00000556898 CARHSP1Q9Y2V2 147 aaKnown RBP3.85□□□□□ -1.79
ATXN3-244ENST00000556898 DYNC2H1Q8NCM8 4307 aaKnown RBP3.85□□□□□ -1.79
ATXN3-244ENST00000556898 HUWE1Q7Z6Z7 4374 aaKnown RBP3.85□□□□□ -1.79
ATXN3-244ENST00000556898 IGHV3OR16-12A0A075B7B8 117 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 LOC102724200A0A096LPH7 203 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-244ENST00000556898 IGKV3D-20A0A0C4DH25 116 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 C7orf71A4D174 169 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 C19orf71A6NCJ1 209 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 KLLNB2CW77 178 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 KRBOX1C9JBD0 128 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 GNRH2O43555 120 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 FRMD6-AS1P0C7T7 363 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 CDKN1BP46527 198 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 ANXA2RQ3ZCQ2 193 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 RNF212Q495C1 297 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 SMUG1Q53HV7 270 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 SAPCD1Q5SSQ6 148 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 FAM110AQ9BQ89 295 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 NIPSNAP3BQ9BS92 247 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 NDFIP1Q9BT67 221 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 TUBA4BQ9H853 241 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 RETNQ9HD89 108 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 NAGKQ9UJ70 344 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 ZFP30Q9Y2G7 519 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 DNAH1Q9P2D7 4330 aa3.84□□□□□ -1.79
ATXN3-244ENST00000556898 MUC21A0A0G2JKD1 596 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 MUC21A0A140T8X8 626 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 C7orf77A4D0Y5 90 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 FBLL1A6NHQ2 334 aaKnown RBP3.83□□□□□ -1.8
ATXN3-244ENST00000556898 ZNF705GA8MUZ8 300 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-244ENST00000556898 GATCO43716 136 aaKnown RBP3.83□□□□□ -1.8
ATXN3-244ENST00000556898 ZNF324O75467 553 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-244ENST00000556898 HTN1P15515 57 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 AZU1P20160 251 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 TCL1AP56279 114 aa3.83□□□□□ -1.8
ATXN3-244ENST00000556898 ERVFC1-1P60608 527 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms