RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 RAB2AP61019 212 aa4.94□□□□□ -1.62
PCNX1-213ENST00000556846 Q6AWC8 147 aa4.94□□□□□ -1.62
PCNX1-213ENST00000556846 LYPD5Q6UWN5 251 aa4.94□□□□□ -1.62
PCNX1-213ENST00000556846 NEGR1Q7Z3B1 354 aa4.94□□□□□ -1.62
PCNX1-213ENST00000556846 OR4C5Q8NGB2 326 aa4.94□□□□□ -1.62
PCNX1-213ENST00000556846 ZNF479Q96JC4 524 aa4.94□□□□□ -1.62
PCNX1-213ENST00000556846 NDFIP1Q9BT67 221 aa4.94□□□□□ -1.62
PCNX1-213ENST00000556846 KRTAP1-5Q9BYS1 174 aa4.94□□□□□ -1.62
PCNX1-213ENST00000556846 MED28Q9H204 178 aa4.94□□□□□ -1.62
PCNX1-213ENST00000556846 TREM1Q9NP99 234 aa4.94□□□□□ -1.62
PCNX1-213ENST00000556846 F6UZH7 168 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 K7EQM0 130 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 ORM1P02763 201 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 CDC34P49427 236 aaPredicted RBP4.93□□□□□ -1.62
PCNX1-213ENST00000556846 LINC00315P59091 139 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 GNG5P63218 68 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 MAPKAPK5-AS1Q8N8E1 139 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 HSD17B11Q8NBQ5 300 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 TMED6Q8WW62 240 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 RASL10AQ92737 203 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 KCNS1Q96KK3 526 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 SGK494Q96LW2 274 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 SDF2L1Q9HCN8 221 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 BATF3Q9NR55 127 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 ALG5Q9Y673 324 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 KMT2AQ03164 3969 aa4.93□□□□□ -1.62
PCNX1-213ENST00000556846 TRAV8-1A0A0A6YYK1 113 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 TMEM238LA0A1B0GVL6 79 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 C9JCJ5 164 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 K7EQD1 137 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 M0R2P5 195 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 CDK2AP2O75956 126 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 MBP02144 154 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 ARL14EPLP0DKL9 152 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 GYPEP15421 78 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 NFE4Q86UQ8 179 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 IQCF2Q8IXL9 164 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 ARL6IP6Q8N6S5 226 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 NHLRC2Q8NBF2 726 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 INO80EQ8NBZ0 244 aaPredicted RBP4.92□□□□□ -1.62
PCNX1-213ENST00000556846 ASB13Q8WXK3 278 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 RAB24Q969Q5 203 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 TXNDC17Q9BRA2 123 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 LY96Q9Y6Y9 160 aa4.92□□□□□ -1.62
PCNX1-213ENST00000556846 TRAV4A0A0B4J268 109 aa4.91□□□□□ -1.62
PCNX1-213ENST00000556846 IGHV3-16A0A0C4DH30 117 aa4.91□□□□□ -1.62
PCNX1-213ENST00000556846 SERTM2A0A1B0GWG4 89 aa4.91□□□□□ -1.62
PCNX1-213ENST00000556846 TAAR5O14804 337 aa4.91□□□□□ -1.62
PCNX1-213ENST00000556846 EVI2AP22794 236 aa4.91□□□□□ -1.62
PCNX1-213ENST00000556846 ERVFC1-1P60608 527 aa4.91□□□□□ -1.62
PCNX1-213ENST00000556846 SUMO1P63165 101 aaKnown RBP4.91□□□□□ -1.62
PCNX1-213ENST00000556846 TDRG1Q3Y452 100 aa4.91□□□□□ -1.62
PCNX1-213ENST00000556846 ZFP69Q49AA0 526 aa4.91□□□□□ -1.62
PCNX1-213ENST00000556846 PRNTQ86SH4 94 aa4.91□□□□□ -1.62
PCNX1-213ENST00000556846 C5orf17Q8NAS9 161 aa4.91□□□□□ -1.62
PCNX1-213ENST00000556846 ACTR3CQ9C0K3 210 aaPredicted RBP4.91□□□□□ -1.62
PCNX1-213ENST00000556846 TNFRSF18Q9Y5U5 241 aa4.91□□□□□ -1.62
PCNX1-213ENST00000556846 NACAE9PAV3 2078 aa4.91□□□□□ -1.62
PCNX1-213ENST00000556846 BORCS7-ASMTA0A0B4J1R7 106 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 PTTG1O95997 202 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 CXorf1O96002 111 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 TCRAP04437 139 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 TYMSP04818 313 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 STAG3L2P0CL84 134 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 STAG3L3P0CL85 134 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 ATP6V0CP27449 155 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 GCHFRP30047 84 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 PPT1P50897 306 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 SERF2P84101 59 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 ZNF876PQ49A33 203 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 SAPCD1Q5SSQ6 148 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 SH2D6Q7Z4S9 175 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 WFDC10BQ8IUB3 73 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 OR2G3Q8NGZ4 309 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 TVP23CQ96ET8 276 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 AQP10Q96PS8 301 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 PRADC1Q9BSG0 188 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 PSMG3Q9BT73 122 aaPredicted RBP4.9□□□□□ -1.63
PCNX1-213ENST00000556846 TMEM167BQ9NRX6 74 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 EPDR1Q9UM22 224 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 TNFSF18Q9UNG2 199 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 PSG8Q9UQ74 426 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 VPS13DQ5THJ4 4388 aa4.9□□□□□ -1.63
PCNX1-213ENST00000556846 FXYD6-FXYD2A0A087WZ82 144 aa4.89□□□□□ -1.63
PCNX1-213ENST00000556846 IGHV3-73A0A0B4J1V6 119 aa4.89□□□□□ -1.63
PCNX1-213ENST00000556846 LOC100131303A0A0U1RQF7 123 aa4.89□□□□□ -1.63
PCNX1-213ENST00000556846 FBLL1A6NHQ2 334 aaKnown RBP4.89□□□□□ -1.63
PCNX1-213ENST00000556846 H3BS24 57 aa4.89□□□□□ -1.63
PCNX1-213ENST00000556846 K7EP13 123 aa4.89□□□□□ -1.63
PCNX1-213ENST00000556846 GCGP01275 180 aa4.89□□□□□ -1.63
PCNX1-213ENST00000556846 IFNA7P01567 189 aa4.89□□□□□ -1.63
PCNX1-213ENST00000556846 PFN1P07737 140 aaKnown RBP4.89□□□□□ -1.63
PCNX1-213ENST00000556846 GIPP09681 153 aaPredicted RBP4.89□□□□□ -1.63
PCNX1-213ENST00000556846 FLI1Q01543 452 aaPredicted RBP4.89□□□□□ -1.63
PCNX1-213ENST00000556846 SMUG1Q53HV7 270 aa4.89□□□□□ -1.63
PCNX1-213ENST00000556846 Q5BKY6 102 aa4.89□□□□□ -1.63
PCNX1-213ENST00000556846 SH3BGRL3Q9H299 93 aa4.89□□□□□ -1.63
PCNX1-213ENST00000556846 MSRB1Q9NZV6 116 aa4.89□□□□□ -1.63
PCNX1-213ENST00000556846 DNAH10Q8IVF4 4471 aa4.89□□□□□ -1.63
PCNX1-213ENST00000556846 KIAA1109Q2LD37 5005 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms