RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 IGHV3-53P01767 116 aa8.58□□□□□ -1.04
SHMT2-223ENST00000556689 H2AFB1P0C5Y9 115 aa8.58□□□□□ -1.04
SHMT2-223ENST00000556689 PPT1P50897 306 aa8.58□□□□□ -1.04
SHMT2-223ENST00000556689 CRYBA4P53673 196 aa8.58□□□□□ -1.04
SHMT2-223ENST00000556689 UBE2L3P68036 154 aaKnown RBP8.58□□□□□ -1.04
SHMT2-223ENST00000556689 FAM74A1Q5RGS3 127 aa8.58□□□□□ -1.04
SHMT2-223ENST00000556689 Q6ZSN1 163 aa8.58□□□□□ -1.04
SHMT2-223ENST00000556689 NEGR1Q7Z3B1 354 aa8.58□□□□□ -1.04
SHMT2-223ENST00000556689 MSRB1Q9NZV6 116 aa8.58□□□□□ -1.04
SHMT2-223ENST00000556689 EVI2AP22794 236 aa8.57□□□□□ -1.04
SHMT2-223ENST00000556689 TCL1AP56279 114 aa8.57□□□□□ -1.04
SHMT2-223ENST00000556689 GCSAMLQ5JQS6 135 aa8.57□□□□□ -1.04
SHMT2-223ENST00000556689 SFT2D1Q8WV19 159 aa8.57□□□□□ -1.04
SHMT2-223ENST00000556689 RAB24Q969Q5 203 aa8.57□□□□□ -1.04
SHMT2-223ENST00000556689 LINC00477Q96M19 166 aa8.57□□□□□ -1.04
SHMT2-223ENST00000556689 TMEM167BQ9NRX6 74 aa8.57□□□□□ -1.04
SHMT2-223ENST00000556689 FLG2Q5D862 2391 aaPredicted RBP8.56□□□□□ -1.04
SHMT2-223ENST00000556689 TRAV5A0A0B4J249 113 aa8.56□□□□□ -1.04
SHMT2-223ENST00000556689 KLLNB2CW77 178 aa8.56□□□□□ -1.04
SHMT2-223ENST00000556689 ARL14EPLP0DKL9 152 aa8.56□□□□□ -1.04
SHMT2-223ENST00000556689 RNASE4P34096 147 aaKnown RBP8.56□□□□□ -1.04
SHMT2-223ENST00000556689 HAMPP81172 84 aa8.56□□□□□ -1.04
SHMT2-223ENST00000556689 ERCC8Q13216 396 aa8.56□□□□□ -1.04
SHMT2-223ENST00000556689 IBA57Q5T440 356 aaKnown RBP8.56□□□□□ -1.04
SHMT2-223ENST00000556689 MRPL53Q96EL3 112 aaKnown RBP8.56□□□□□ -1.04
SHMT2-223ENST00000556689 C8orf49Q96NF6 230 aa8.56□□□□□ -1.04
SHMT2-223ENST00000556689 TMEM70Q9BUB7 260 aa8.56□□□□□ -1.04
SHMT2-223ENST00000556689 PAXXQ9BUH6 204 aa8.56□□□□□ -1.04
SHMT2-223ENST00000556689 ZNF253O75346 499 aa8.55□□□□□ -1.04
SHMT2-223ENST00000556689 GPX1P07203 203 aa8.55□□□□□ -1.04
SHMT2-223ENST00000556689 STAG3L2P0CL84 134 aa8.55□□□□□ -1.04
SHMT2-223ENST00000556689 STAG3L3P0CL85 134 aa8.55□□□□□ -1.04
SHMT2-223ENST00000556689 TAGLN2P37802 199 aaKnown RBP8.55□□□□□ -1.04
SHMT2-223ENST00000556689 BTN1A1Q13410 526 aa8.55□□□□□ -1.04
SHMT2-223ENST00000556689 FHL2Q14192 279 aa8.55□□□□□ -1.04
SHMT2-223ENST00000556689 MIR17HGQ75NE6 70 aa8.55□□□□□ -1.04
SHMT2-223ENST00000556689 FAM19A4Q96LR4 140 aa8.55□□□□□ -1.04
SHMT2-223ENST00000556689 AGPAT4-IT1Q9H0P7 198 aa8.55□□□□□ -1.04
SHMT2-223ENST00000556689 OR51M1Q9H341 326 aa8.55□□□□□ -1.04
SHMT2-223ENST00000556689 AAMDCQ9H7C9 122 aa8.55□□□□□ -1.04
SHMT2-223ENST00000556689 MANBALQ9NQG1 85 aa8.55□□□□□ -1.04
SHMT2-223ENST00000556689 MRPL16Q9NX20 251 aaKnown RBP8.55□□□□□ -1.04
SHMT2-223ENST00000556689 TMEM14CQ9P0S9 112 aa8.55□□□□□ -1.04
SHMT2-223ENST00000556689 IGLV5-52A0A0A0MRZ9 124 aa8.54□□□□□ -1.04
SHMT2-223ENST00000556689 TRGV4A0A0C4DH28 118 aa8.54□□□□□ -1.04
SHMT2-223ENST00000556689 M0R3E3 92 aa8.54□□□□□ -1.04
SHMT2-223ENST00000556689 RGS13O14921 159 aa8.54□□□□□ -1.04
SHMT2-223ENST00000556689 HMGB3O15347 200 aaKnown RBP8.54□□□□□ -1.04
SHMT2-223ENST00000556689 WFDC10BQ8IUB3 73 aa8.54□□□□□ -1.04
SHMT2-223ENST00000556689 VGLL1Q99990 258 aa8.54□□□□□ -1.04
SHMT2-223ENST00000556689 SLC25A2Q9BXI2 301 aa8.54□□□□□ -1.04
SHMT2-223ENST00000556689 TP53TG3Q9ULZ0 132 aa8.54□□□□□ -1.04
SHMT2-223ENST00000556689 PRELID1Q9Y255 219 aa8.54□□□□□ -1.04
SHMT2-223ENST00000556689 TRBV19A0A075B6N1 114 aa8.53□□□□□ -1.04
SHMT2-223ENST00000556689 A0A1B0GV50 99 aa8.53□□□□□ -1.04
SHMT2-223ENST00000556689 K7EQD1 137 aa8.53□□□□□ -1.04
SHMT2-223ENST00000556689 CRYGDP07320 174 aa8.53□□□□□ -1.04
SHMT2-223ENST00000556689 NMBP08949 121 aa8.53□□□□□ -1.04
SHMT2-223ENST00000556689 CRISP2P16562 243 aa8.53□□□□□ -1.04
SHMT2-223ENST00000556689 GCHFRP30047 84 aa8.53□□□□□ -1.04
SHMT2-223ENST00000556689 SRIP30626 198 aa8.53□□□□□ -1.04
SHMT2-223ENST00000556689 FHITP49789 147 aa8.53□□□□□ -1.04
SHMT2-223ENST00000556689 FGF8P55075 233 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-223ENST00000556689 PDE6HQ13956 83 aa8.53□□□□□ -1.04
SHMT2-223ENST00000556689 C10orf126Q8N4M7 172 aa8.53□□□□□ -1.04
SHMT2-223ENST00000556689 NTN5Q8WTR8 489 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-223ENST00000556689 MBD3L1Q8WWY6 194 aa8.53□□□□□ -1.04
SHMT2-223ENST00000556689 NKX6-2Q9C056 277 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-223ENST00000556689 ARL2-SNX15V9GYD0 113 aa8.53□□□□□ -1.04
SHMT2-223ENST00000556689 IGHV1OR15-1A0A075B7D0 117 aa8.52□□□□□ -1.05
SHMT2-223ENST00000556689 TRAV1-1A0A0B4J248 108 aa8.52□□□□□ -1.05
SHMT2-223ENST00000556689 PSCAO43653 123 aa8.52□□□□□ -1.05
SHMT2-223ENST00000556689 OR10J4P0C629 311 aa8.52□□□□□ -1.05
SHMT2-223ENST00000556689 HIST1H1EP10412 219 aaKnown RBP8.52□□□□□ -1.05
SHMT2-223ENST00000556689 CLLU1Q5K131 121 aa8.52□□□□□ -1.05
SHMT2-223ENST00000556689 PCNPQ8WW12 178 aaKnown RBP8.52□□□□□ -1.05
SHMT2-223ENST00000556689 GNG13Q9P2W3 67 aa8.52□□□□□ -1.05
SHMT2-223ENST00000556689 LRCOL1A6NCL2 159 aa8.51□□□□□ -1.05
SHMT2-223ENST00000556689 ORM1P02763 201 aa8.51□□□□□ -1.05
SHMT2-223ENST00000556689 PYYP10082 97 aa8.51□□□□□ -1.05
SHMT2-223ENST00000556689 GYPEP15421 78 aa8.51□□□□□ -1.05
SHMT2-223ENST00000556689 ZNF726P1Q15940 193 aa8.51□□□□□ -1.05
SHMT2-223ENST00000556689 TMEM78Q5T7P6 136 aa8.51□□□□□ -1.05
SHMT2-223ENST00000556689 C9orf47Q6ZRZ4 202 aa8.51□□□□□ -1.05
SHMT2-223ENST00000556689 CMTM2Q8TAZ6 248 aa8.51□□□□□ -1.05
SHMT2-223ENST00000556689 BLNKQ8WV28 456 aa8.51□□□□□ -1.05
SHMT2-223ENST00000556689 KRTAP29-1A8MX34 341 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-223ENST00000556689 K7EQM0 130 aa8.5□□□□□ -1.05
SHMT2-223ENST00000556689 NDUFB4O95168 129 aa8.5□□□□□ -1.05
SHMT2-223ENST00000556689 PLA2G1BP04054 148 aaKnown RBP8.5□□□□□ -1.05
SHMT2-223ENST00000556689 NBEAP1P0C6P0 100 aa8.5□□□□□ -1.05
SHMT2-223ENST00000556689 CSN1S1P47710 185 aa8.5□□□□□ -1.05
SHMT2-223ENST00000556689 IFITM2Q01629 132 aa8.5□□□□□ -1.05
SHMT2-223ENST00000556689 ZNF415Q09FC8 603 aa8.5□□□□□ -1.05
SHMT2-223ENST00000556689 CST9LP1Q5W188 147 aa8.5□□□□□ -1.05
SHMT2-223ENST00000556689 Q6ZQT7 251 aa8.5□□□□□ -1.05
SHMT2-223ENST00000556689 EXOC3-AS1Q8N2X6 119 aa8.5□□□□□ -1.05
SHMT2-223ENST00000556689 ZFAND2AQ8N6M9 145 aa8.5□□□□□ -1.05
SHMT2-223ENST00000556689 TXNDC17Q9BRA2 123 aa8.5□□□□□ -1.05
SHMT2-223ENST00000556689 TCEAL7Q9BRU2 100 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 673.5 ms