RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 Q75L30 129 aa4.6□□□□□ -1.67
TDP1-215ENST00000556498 UBALD1Q8TB05 177 aa4.6□□□□□ -1.67
TDP1-215ENST00000556498 LHFPL6Q9Y693 200 aa4.6□□□□□ -1.67
TDP1-215ENST00000556498 A0A087X002 238 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 TRAV12-1A0A0B4J245 112 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 H7C423 109 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 PSPHP1O15172 72 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 FSTL3O95633 263 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 IGHV3-33P01772 117 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 PRSS1P07477 247 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 CCL4P13236 92 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 HCFC1P51610 2035 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 TFF2Q03403 129 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 Q0VFX4 171 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 FXYD3Q14802 87 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 LPAL2Q16609 132 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.59□□□□□ -1.67
TDP1-215ENST00000556498 LINC01590Q5TEZ4 76 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 ZNF818PQ6ZRF7 136 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 VMO1Q7Z5L0 202 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 NLRC5Q86WI3 1866 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 FAM223AQ8IWN6 122 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 C20orf197Q8N268 126 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 EXPH5Q8NEV8 1989 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 LINC00474Q9P2X8 69 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 U3KQK5 164 aa4.59□□□□□ -1.67
TDP1-215ENST00000556498 KIAA1671Q9BY89 1806 aa4.58□□□□□ -1.68
TDP1-215ENST00000556498 IGLV3-32A0A0A0MS00 114 aa4.58□□□□□ -1.68
TDP1-215ENST00000556498 IGLV1-36A0A0B4J1U3 117 aa4.58□□□□□ -1.68
TDP1-215ENST00000556498 TMEM30CPA0ZSE6 113 aa4.58□□□□□ -1.68
TDP1-215ENST00000556498 ERC2-IT1O76042 136 aa4.58□□□□□ -1.68
TDP1-215ENST00000556498 IGLV2-8P01709 118 aa4.58□□□□□ -1.68
TDP1-215ENST00000556498 ARL14EPLP0DKL9 152 aa4.58□□□□□ -1.68
TDP1-215ENST00000556498 PRR3P79522 188 aaKnown RBP4.58□□□□□ -1.68
TDP1-215ENST00000556498 EIF4EBP1Q13541 118 aaPredicted RBP4.58□□□□□ -1.68
TDP1-215ENST00000556498 NSUN5P1Q3KNT7 163 aa4.58□□□□□ -1.68
TDP1-215ENST00000556498 ASB16-AS1Q495Z4 193 aa4.58□□□□□ -1.68
TDP1-215ENST00000556498 MAPKAPK5-AS1Q8N8E1 139 aa4.58□□□□□ -1.68
TDP1-215ENST00000556498 ARHGAP5-AS1Q96IT6 56 aa4.58□□□□□ -1.68
TDP1-215ENST00000556498 RPP21Q9H633 154 aaKnown RBP4.58□□□□□ -1.68
TDP1-215ENST00000556498 UBE2D4Q9Y2X8 147 aa4.58□□□□□ -1.68
TDP1-215ENST00000556498 R4GMQ9 66 aa4.58□□□□□ -1.68
TDP1-215ENST00000556498 IGKV1D-43A0A0B4J1Z2 117 aa4.57□□□□□ -1.68
TDP1-215ENST00000556498 IGHV1OR15-9A0A0B4J2B8 117 aa4.57□□□□□ -1.68
TDP1-215ENST00000556498 FAM223BA6NKX1 122 aa4.57□□□□□ -1.68
TDP1-215ENST00000556498 IGKV1-5P01602 117 aa4.57□□□□□ -1.68
TDP1-215ENST00000556498 FGF12P61328 243 aa4.57□□□□□ -1.68
TDP1-215ENST00000556498 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
TDP1-215ENST00000556498 Q6ZR03 302 aa4.57□□□□□ -1.68
TDP1-215ENST00000556498 DYNAPQ8N1N2 210 aa4.57□□□□□ -1.68
TDP1-215ENST00000556498 WFDC5Q8TCV5 224 aa4.57□□□□□ -1.68
TDP1-215ENST00000556498 CYYR1Q96J86 154 aa4.57□□□□□ -1.68
TDP1-215ENST00000556498 TTTY10Q9BZA0 68 aa4.57□□□□□ -1.68
TDP1-215ENST00000556498 ZNF355PQ9NSJ1 428 aa4.57□□□□□ -1.68
TDP1-215ENST00000556498 RALGAPA2Q2PPJ7 1873 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 IGHV1OR21-1A0A087WYE8 117 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 A0A096LNJ9 63 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 IGKV6-21A0A0C4DH24 114 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 TMEM223A0PJW6 202 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 SH2D1AO60880 128 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 IGLV3-27P01718 113 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 BGLAPP02818 100 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 SAA1P0DJI8 122 aaPredicted RBP4.56□□□□□ -1.68
TDP1-215ENST00000556498 CRIP2P52943 208 aaPredicted RBP4.56□□□□□ -1.68
TDP1-215ENST00000556498 LINC00313P59037 77 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 KRTAP27-1Q3LI81 207 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 FBXL19-AS1Q494R0 122 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 LINC01554Q52M75 96 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 CLLU1OSQ5K130 101 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 SPANXN5Q5MJ07 72 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 GPHB5Q86YW7 130 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 DEFB106AQ8N104 65 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 ORMDL3Q8N138 153 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 LINC00337Q8N6G1 96 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 MPLKIPQ8TAP9 179 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 SMCR5Q8TEV8 140 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 PCSK5Q92824 1860 aa4.56□□□□□ -1.68
TDP1-215ENST00000556498 COL11A1P12107 1806 aaPredicted RBP4.56□□□□□ -1.68
TDP1-215ENST00000556498 A0A087WZ39 114 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 A0A1B0GUT8 65 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 BUB1B-PAK6H3BSN5 160 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 C19orf84I3L1E1 186 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 TRBV12-3P01733 135 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 PRM2P04554 102 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 HMGA1P17096 107 aaKnown RBP4.55□□□□□ -1.68
TDP1-215ENST00000556498 PROK1P58294 105 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 FAM72BQ86X60 149 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 FAM216BQ8N7L0 139 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 TMEM263Q8WUH6 116 aaKnown RBP4.55□□□□□ -1.68
TDP1-215ENST00000556498 ZNF524Q96C55 264 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 CYP4F30PQ9H0H9 118 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 PHLDA3Q9Y5J5 127 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 TIMM8BQ9Y5J9 83 aaPredicted RBP4.55□□□□□ -1.68
TDP1-215ENST00000556498 DOCK9Q9BZ29 2069 aa4.55□□□□□ -1.68
TDP1-215ENST00000556498 IGKV1D-17A0A075B6S4 117 aa4.54□□□□□ -1.68
TDP1-215ENST00000556498 IGKV1-9A0A0C4DH69 117 aa4.54□□□□□ -1.68
TDP1-215ENST00000556498 A0A1B0GVT2 93 aa4.54□□□□□ -1.68
TDP1-215ENST00000556498 A0A1B0GW54 56 aa4.54□□□□□ -1.68
TDP1-215ENST00000556498 EPOPA6NHQ4 379 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms