RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 GSN-AS1Q9NRJ2 163 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 FUT9Q9Y231 359 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 SIVA1O15304 175 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 PLA2G10O15496 165 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 PVALBP20472 110 aaPredicted RBP6.8□□□□□ -1.32
SCFD1-220ENST00000556486 ERVFC1-1P60608 527 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 HBG1P69891 147 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 HBG2P69892 147 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 CD300CQ08708 224 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 SLAQ13239 276 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 ATP6V1FQ16864 119 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 TMEM252Q8N6L7 170 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 ZFAND2AQ8N6M9 145 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 URB1-AS1Q96HZ7 61 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 C2orf50Q96LR7 162 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 VGLL1Q99990 258 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 PRO0255Q9UI72 69 aa6.8□□□□□ -1.32
SCFD1-220ENST00000556486 TRGV1A0A0A0MS02 117 aa6.79□□□□□ -1.32
SCFD1-220ENST00000556486 UBE2L5PA0A1B0GUS4 154 aa6.79□□□□□ -1.32
SCFD1-220ENST00000556486 FAM24AA6NFZ4 105 aa6.79□□□□□ -1.32
SCFD1-220ENST00000556486 CCSO14618 274 aa6.79□□□□□ -1.32
SCFD1-220ENST00000556486 TCRBP04435 133 aa6.79□□□□□ -1.32
SCFD1-220ENST00000556486 BCAP31P51572 246 aa6.79□□□□□ -1.32
SCFD1-220ENST00000556486 BTN1A1Q13410 526 aa6.79□□□□□ -1.32
SCFD1-220ENST00000556486 STX12Q86Y82 276 aa6.79□□□□□ -1.32
SCFD1-220ENST00000556486 FAM167A-AS1Q96KT0 104 aa6.79□□□□□ -1.32
SCFD1-220ENST00000556486 KLF12Q9Y4X4 402 aa6.79□□□□□ -1.32
SCFD1-220ENST00000556486 LSM5Q9Y4Y9 91 aaKnown RBP6.79□□□□□ -1.32
SCFD1-220ENST00000556486 ICOSQ9Y6W8 199 aa6.79□□□□□ -1.32
SCFD1-220ENST00000556486 LRP1Q07954 4544 aaKnown RBP6.79□□□□□ -1.32
SCFD1-220ENST00000556486 IGSF23A1L1A6 192 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 LYRM1O43325 122 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 NXPH4O95158 308 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 GPX1P07203 203 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 CRYBA4P53673 196 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 BAXQ07812 192 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 ERCC8Q13216 396 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 NFE4Q86UQ8 179 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 IQCF2Q8IXL9 164 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 NEXN-AS1Q8NBZ9 246 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 NPCDR1Q9BY65 106 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 NUDT15Q9NV35 164 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 ZNF492Q9P255 531 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 TP53TG3Q9ULZ0 132 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 TIMM9Q9Y5J7 89 aa6.78□□□□□ -1.32
SCFD1-220ENST00000556486 IGHV1OR15-1A0A075B7D0 117 aa6.77□□□□□ -1.33
SCFD1-220ENST00000556486 FAM25EA8MYX2 175 aa6.77□□□□□ -1.33
SCFD1-220ENST00000556486 PYYP10082 97 aa6.77□□□□□ -1.33
SCFD1-220ENST00000556486 FGF7P21781 194 aa6.77□□□□□ -1.33
SCFD1-220ENST00000556486 RNASE4P34096 147 aaKnown RBP6.77□□□□□ -1.33
SCFD1-220ENST00000556486 FHL2Q14192 279 aa6.77□□□□□ -1.33
SCFD1-220ENST00000556486 MRPL23Q16540 153 aaKnown RBP6.77□□□□□ -1.33
SCFD1-220ENST00000556486 C10orf25Q5T742 122 aa6.77□□□□□ -1.33
SCFD1-220ENST00000556486 TMEM78Q5T7P6 136 aa6.77□□□□□ -1.33
SCFD1-220ENST00000556486 PRR9Q5T870 116 aa6.77□□□□□ -1.33
SCFD1-220ENST00000556486 LYPD5Q6UWN5 251 aa6.77□□□□□ -1.33
SCFD1-220ENST00000556486 EXOC3-AS1Q8N2X6 119 aa6.77□□□□□ -1.33
SCFD1-220ENST00000556486 MPLKIPQ8TAP9 179 aa6.77□□□□□ -1.33
SCFD1-220ENST00000556486 SLC25A2Q9BXI2 301 aa6.77□□□□□ -1.33
SCFD1-220ENST00000556486 HHLA3Q9XRX5 114 aa6.77□□□□□ -1.33
SCFD1-220ENST00000556486 A0A087WTM6 91 aa6.76□□□□□ -1.33
SCFD1-220ENST00000556486 RBAKDNA6NC62 111 aa6.76□□□□□ -1.33
SCFD1-220ENST00000556486 NBEAP1P0C6P0 100 aa6.76□□□□□ -1.33
SCFD1-220ENST00000556486 ZNF138P52744 262 aa6.76□□□□□ -1.33
SCFD1-220ENST00000556486 GCSAMLQ5JQS6 135 aa6.76□□□□□ -1.33
SCFD1-220ENST00000556486 NEGR1Q7Z3B1 354 aa6.76□□□□□ -1.33
SCFD1-220ENST00000556486 RASL10AQ92737 203 aa6.76□□□□□ -1.33
SCFD1-220ENST00000556486 SEC22CQ9BRL7 303 aa6.76□□□□□ -1.33
SCFD1-220ENST00000556486 MRPL32Q9BYC8 188 aaKnown RBP6.76□□□□□ -1.33
SCFD1-220ENST00000556486 LENEPQ9Y5L5 61 aa6.76□□□□□ -1.33
SCFD1-220ENST00000556486 DNAH8Q96JB1 4490 aa6.76□□□□□ -1.33
SCFD1-220ENST00000556486 TRAV6A0A075B6T7 132 aa6.75□□□□□ -1.33
SCFD1-220ENST00000556486 TRAV9-2A0A087WT02 112 aa6.75□□□□□ -1.33
SCFD1-220ENST00000556486 IGKV2-40A0A087WW87 121 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-220ENST00000556486 IGKV2D-40P01614 121 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-220ENST00000556486 ZNF415Q09FC8 603 aa6.75□□□□□ -1.33
SCFD1-220ENST00000556486 ZNF266Q14584 549 aa6.75□□□□□ -1.33
SCFD1-220ENST00000556486 OR10G4Q8NGN3 311 aa6.75□□□□□ -1.33
SCFD1-220ENST00000556486 BLNKQ8WV28 456 aa6.75□□□□□ -1.33
SCFD1-220ENST00000556486 FXYD5Q96DB9 178 aa6.75□□□□□ -1.33
SCFD1-220ENST00000556486 CCDC32Q9BV29 185 aa6.75□□□□□ -1.33
SCFD1-220ENST00000556486 KCNIP2Q9NS61 270 aa6.75□□□□□ -1.33
SCFD1-220ENST00000556486 MRPL16Q9NX20 251 aaKnown RBP6.75□□□□□ -1.33
SCFD1-220ENST00000556486 KRTAP29-1A8MX34 341 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-220ENST00000556486 AMTP48728 403 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 S100A10P60903 97 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 GAGE1Q13065 139 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 GAGE4Q13068 117 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 TDRG1Q3Y452 100 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 Q6AWC8 147 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 FAM122CQ6P4D5 195 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 Q6ZQT7 251 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 LINC00299Q6ZSB3 139 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 MIR17HGQ75NE6 70 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 OR5C1Q8NGR4 320 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 PRSS3P2Q8NHM4 247 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 TMED6Q8WW62 240 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 OR51M1Q9H341 326 aa6.74□□□□□ -1.33
SCFD1-220ENST00000556486 GPN1Q9HCN4 374 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-220ENST00000556486 LY96Q9Y6Y9 160 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms