RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ZNF80P51504 273 aaPredicted RBP6.76□□□□□ -1.33
ACTN1-218ENST00000556343 LINC01559Q495D7 138 aa6.76□□□□□ -1.33
ACTN1-218ENST00000556343 TSKUQ8WUA8 353 aa6.76□□□□□ -1.33
ACTN1-218ENST00000556343 BORCS7Q96B45 105 aa6.76□□□□□ -1.33
ACTN1-218ENST00000556343 SMCO4Q9NRQ5 59 aa6.76□□□□□ -1.33
ACTN1-218ENST00000556343 CBY3A6NI87 242 aa6.75□□□□□ -1.33
ACTN1-218ENST00000556343 CRXO43186 299 aaPredicted RBP6.75□□□□□ -1.33
ACTN1-218ENST00000556343 ASIPP42127 132 aa6.75□□□□□ -1.33
ACTN1-218ENST00000556343 DEFB121Q5J5C9 76 aa6.75□□□□□ -1.33
ACTN1-218ENST00000556343 LINC00322Q6ZN03 302 aaPredicted RBP6.75□□□□□ -1.33
ACTN1-218ENST00000556343 LINC00467Q9BRT7 94 aa6.75□□□□□ -1.33
ACTN1-218ENST00000556343 GFRA4Q9GZZ7 299 aa6.75□□□□□ -1.33
ACTN1-218ENST00000556343 IL36BQ9NZH7 164 aa6.75□□□□□ -1.33
ACTN1-218ENST00000556343 NAT8BQ9UHF3 227 aa6.75□□□□□ -1.33
ACTN1-218ENST00000556343 IGHV3OR16-12A0A075B7B8 117 aa6.74□□□□□ -1.33
ACTN1-218ENST00000556343 TMSB15BA0A087X1C1 80 aa6.74□□□□□ -1.33
ACTN1-218ENST00000556343 SMIM9A6NGZ8 99 aa6.74□□□□□ -1.33
ACTN1-218ENST00000556343 F2Z2F3 143 aa6.74□□□□□ -1.33
ACTN1-218ENST00000556343 TDRG1Q3Y452 100 aa6.74□□□□□ -1.33
ACTN1-218ENST00000556343 ANXA2RQ3ZCQ2 193 aa6.74□□□□□ -1.33
ACTN1-218ENST00000556343 MUC21Q5SSG8 566 aa6.74□□□□□ -1.33
ACTN1-218ENST00000556343 PRR9Q5T870 116 aa6.74□□□□□ -1.33
ACTN1-218ENST00000556343 Q6ZWC4 215 aa6.74□□□□□ -1.33
ACTN1-218ENST00000556343 RCHY1Q96PM5 261 aa6.74□□□□□ -1.33
ACTN1-218ENST00000556343 V9GYV3 84 aa6.74□□□□□ -1.33
ACTN1-218ENST00000556343 DNAH3Q8TD57 4116 aa6.73□□□□□ -1.33
ACTN1-218ENST00000556343 TRAV9-1A0A075B6T8 112 aa6.73□□□□□ -1.33
ACTN1-218ENST00000556343 IGKV3D-20A0A0C4DH25 116 aa6.73□□□□□ -1.33
ACTN1-218ENST00000556343 MED14OSP0DP75 135 aa6.73□□□□□ -1.33
ACTN1-218ENST00000556343 HTN1P15515 57 aa6.73□□□□□ -1.33
ACTN1-218ENST00000556343 KIR3DS1Q14943 382 aa6.73□□□□□ -1.33
ACTN1-218ENST00000556343 RRN3P1Q2M238 152 aa6.73□□□□□ -1.33
ACTN1-218ENST00000556343 DNLZQ5SXM8 178 aa6.73□□□□□ -1.33
ACTN1-218ENST00000556343 ZNF493Q6ZR52 646 aa6.73□□□□□ -1.33
ACTN1-218ENST00000556343 FER1L6-AS1Q8NA97 138 aa6.73□□□□□ -1.33
ACTN1-218ENST00000556343 PKD1L1Q8TDX9 2849 aa6.73□□□□□ -1.33
ACTN1-218ENST00000556343 MGAM2Q2M2H8 2515 aa6.73□□□□□ -1.33
ACTN1-218ENST00000556343 SMIM27A0A1W2PRY6 76 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 GRIFINA4D1Z8 144 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 S100A8P05109 93 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 GIG44P09565 113 aaPredicted RBP6.72□□□□□ -1.33
ACTN1-218ENST00000556343 FRMD6-AS1P0C7T7 363 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 FOXA3P55318 350 aaPredicted RBP6.72□□□□□ -1.33
ACTN1-218ENST00000556343 CACNG7P62955 275 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 ZNF415Q09FC8 603 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 RIGQ13278 110 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 WDR73Q6P4I2 378 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 ATRAIDQ6UW56 229 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 SMIM15Q7Z3B0 74 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 C1orf158Q8N1D5 194 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 NEU1Q99519 415 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 SPXQ9BT56 116 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 TPPP3Q9BW30 176 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 TP53TG1Q9Y2A0 90 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 AGRNO00468 2067 aa6.72□□□□□ -1.33
ACTN1-218ENST00000556343 A0A1B0GW15 77 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 HIGD1CA8MV81 97 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 SNURFLB1AK76 121 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 GNRH2O43555 120 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 SPRY2O43597 315 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 TYMSP04818 313 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 OR5AL1P0C617 328 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 COX19Q49B96 90 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 SPANXN1Q5VSR9 72 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 ZNF705AQ6ZN79 300 aaPredicted RBP6.71□□□□□ -1.34
ACTN1-218ENST00000556343 SYT8Q8NBV8 401 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 CSNK1G2-AS1Q8NCQ2 148 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 RNF183Q96D59 192 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 C16orf74Q96GX8 76 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 PGLYRP4Q96LB8 373 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 C11orf21Q9P2W6 132 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 PHLDA3Q9Y5J5 127 aa6.71□□□□□ -1.34
ACTN1-218ENST00000556343 TIMM8BQ9Y5J9 83 aaPredicted RBP6.71□□□□□ -1.34
ACTN1-218ENST00000556343 A0A1B0GUT8 65 aa6.7□□□□□ -1.34
ACTN1-218ENST00000556343 K7EIL1 84 aa6.7□□□□□ -1.34
ACTN1-218ENST00000556343 ARMS2P0C7Q2 107 aa6.7□□□□□ -1.34
ACTN1-218ENST00000556343 MIFP14174 115 aa6.7□□□□□ -1.34
ACTN1-218ENST00000556343 TCL1AP56279 114 aa6.7□□□□□ -1.34
ACTN1-218ENST00000556343 LYZL1Q6UWQ5 148 aa6.7□□□□□ -1.34
ACTN1-218ENST00000556343 ATP5L2Q7Z4Y8 100 aa6.7□□□□□ -1.34
ACTN1-218ENST00000556343 NUP35Q8NFH5 326 aa6.7□□□□□ -1.34
ACTN1-218ENST00000556343 OR11H2Q8NH07 326 aa6.7□□□□□ -1.34
ACTN1-218ENST00000556343 MRAPQ8TCY5 172 aa6.7□□□□□ -1.34
ACTN1-218ENST00000556343 TMEM263Q8WUH6 116 aaKnown RBP6.7□□□□□ -1.34
ACTN1-218ENST00000556343 ZMAT4Q9H898 229 aa6.7□□□□□ -1.34
ACTN1-218ENST00000556343 TP53TG3Q9ULZ0 132 aa6.7□□□□□ -1.34
ACTN1-218ENST00000556343 URGCP-MRPS24S4R325 110 aa6.7□□□□□ -1.34
ACTN1-218ENST00000556343 IGHV3-16A0A0C4DH30 117 aa6.69□□□□□ -1.34
ACTN1-218ENST00000556343 H3BVH4 76 aa6.69□□□□□ -1.34
ACTN1-218ENST00000556343 SNAI2O43623 268 aa6.69□□□□□ -1.34
ACTN1-218ENST00000556343 PRB2P02812 416 aaPredicted RBP6.69□□□□□ -1.34
ACTN1-218ENST00000556343 IGLC6P0CF74 106 aa6.69□□□□□ -1.34
ACTN1-218ENST00000556343 RBMY1A1P0DJD3 496 aaKnown RBP6.69□□□□□ -1.34
ACTN1-218ENST00000556343 RBMY1CP0DJD4 496 aa6.69□□□□□ -1.34
ACTN1-218ENST00000556343 GZMBP10144 247 aa6.69□□□□□ -1.34
ACTN1-218ENST00000556343 FAM3BP58499 235 aaPredicted RBP6.69□□□□□ -1.34
ACTN1-218ENST00000556343 RBMY1FQ15415 496 aaKnown RBP6.69□□□□□ -1.34
ACTN1-218ENST00000556343 DEFB135Q30KP9 77 aa6.69□□□□□ -1.34
ACTN1-218ENST00000556343 TMEM88Q6PEY1 159 aa6.69□□□□□ -1.34
ACTN1-218ENST00000556343 RASL11AQ6T310 242 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms