RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 FAM167A-AS1Q96KT0 104 aa7.14□□□□□ -1.27
SYNE2-221ENST00000556342 SLC25A2Q9BXI2 301 aa7.14□□□□□ -1.27
SYNE2-221ENST00000556342 SLC25A31Q9H0C2 315 aa7.14□□□□□ -1.27
SYNE2-221ENST00000556342 GPN1Q9HCN4 374 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-221ENST00000556342 TRGV11A0A075B6L2 103 aa7.13□□□□□ -1.27
SYNE2-221ENST00000556342 TRAV4A0A0B4J268 109 aa7.13□□□□□ -1.27
SYNE2-221ENST00000556342 FAM25EA8MYX2 175 aa7.13□□□□□ -1.27
SYNE2-221ENST00000556342 NBEAP1P0C6P0 100 aa7.13□□□□□ -1.27
SYNE2-221ENST00000556342 PPT1P50897 306 aa7.13□□□□□ -1.27
SYNE2-221ENST00000556342 TMEM183BQ1AE95 376 aa7.13□□□□□ -1.27
SYNE2-221ENST00000556342 SPANXN2Q5MJ10 180 aa7.13□□□□□ -1.27
SYNE2-221ENST00000556342 Q6ZSA8 131 aa7.13□□□□□ -1.27
SYNE2-221ENST00000556342 TMEM183AQ8IXX5 376 aa7.13□□□□□ -1.27
SYNE2-221ENST00000556342 DEFB104AQ8WTQ1 72 aa7.13□□□□□ -1.27
SYNE2-221ENST00000556342 Q9HAA7 133 aa7.13□□□□□ -1.27
SYNE2-221ENST00000556342 LYRM2Q9NU23 88 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-221ENST00000556342 IGSF23A1L1A6 192 aa7.12□□□□□ -1.27
SYNE2-221ENST00000556342 PVALBP20472 110 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-221ENST00000556342 HBG1P69891 147 aa7.12□□□□□ -1.27
SYNE2-221ENST00000556342 HBG2P69892 147 aa7.12□□□□□ -1.27
SYNE2-221ENST00000556342 Q6AWC8 147 aa7.12□□□□□ -1.27
SYNE2-221ENST00000556342 FAM159AQ6UWV7 190 aa7.12□□□□□ -1.27
SYNE2-221ENST00000556342 MIR17HGQ75NE6 70 aa7.12□□□□□ -1.27
SYNE2-221ENST00000556342 TMEM252Q8N6L7 170 aa7.12□□□□□ -1.27
SYNE2-221ENST00000556342 NHLRC2Q8NBF2 726 aa7.12□□□□□ -1.27
SYNE2-221ENST00000556342 OR4C5Q8NGB2 326 aa7.12□□□□□ -1.27
SYNE2-221ENST00000556342 PHYHIPLQ96FC7 376 aa7.12□□□□□ -1.27
SYNE2-221ENST00000556342 OR51M1Q9H341 326 aa7.12□□□□□ -1.27
SYNE2-221ENST00000556342 LRP1Q07954 4544 aaKnown RBP7.11□□□□□ -1.27
SYNE2-221ENST00000556342 RBAKDNA6NC62 111 aa7.11□□□□□ -1.27
SYNE2-221ENST00000556342 C5orf51A6NDU8 294 aa7.11□□□□□ -1.27
SYNE2-221ENST00000556342 CENPXA8MT69 81 aa7.11□□□□□ -1.27
SYNE2-221ENST00000556342 M0R2P5 195 aa7.11□□□□□ -1.27
SYNE2-221ENST00000556342 OR10J4P0C629 311 aa7.11□□□□□ -1.27
SYNE2-221ENST00000556342 GATA1P15976 413 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-221ENST00000556342 ATP6V1FQ16864 119 aa7.11□□□□□ -1.27
SYNE2-221ENST00000556342 SERTAD4-AS1Q5TG53 156 aa7.11□□□□□ -1.27
SYNE2-221ENST00000556342 STX12Q86Y82 276 aa7.11□□□□□ -1.27
SYNE2-221ENST00000556342 FXYD5Q96DB9 178 aa7.11□□□□□ -1.27
SYNE2-221ENST00000556342 SDHCQ99643 169 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-221ENST00000556342 NPCDR1Q9BY65 106 aa7.11□□□□□ -1.27
SYNE2-221ENST00000556342 TRAV8-6A0A0B4J262 113 aa7.1□□□□□ -1.27
SYNE2-221ENST00000556342 IGHV3-16A0A0C4DH30 117 aa7.1□□□□□ -1.27
SYNE2-221ENST00000556342 CSN1S1P47710 185 aa7.1□□□□□ -1.27
SYNE2-221ENST00000556342 S100A10P60903 97 aa7.1□□□□□ -1.27
SYNE2-221ENST00000556342 WFDC2Q14508 124 aa7.1□□□□□ -1.27
SYNE2-221ENST00000556342 TDRG1Q3Y452 100 aa7.1□□□□□ -1.27
SYNE2-221ENST00000556342 OR10J3Q5JRS4 329 aa7.1□□□□□ -1.27
SYNE2-221ENST00000556342 C2orf50Q96LR7 162 aa7.1□□□□□ -1.27
SYNE2-221ENST00000556342 PAXXQ9BUH6 204 aa7.1□□□□□ -1.27
SYNE2-221ENST00000556342 NAGKQ9UJ70 344 aa7.1□□□□□ -1.27
SYNE2-221ENST00000556342 LENEPQ9Y5L5 61 aa7.1□□□□□ -1.27
SYNE2-221ENST00000556342 CCDC160A6NGH7 325 aa7.09□□□□□ -1.27
SYNE2-221ENST00000556342 IGHV3-30P01768 117 aa7.09□□□□□ -1.27
SYNE2-221ENST00000556342 IGHV3-33P01772 117 aa7.09□□□□□ -1.27
SYNE2-221ENST00000556342 PFN1P07737 140 aaKnown RBP7.09□□□□□ -1.27
SYNE2-221ENST00000556342 IGHV3-30-3P0DP02 117 aa7.09□□□□□ -1.27
SYNE2-221ENST00000556342 IGHV3-30-5P0DP03 117 aa7.09□□□□□ -1.27
SYNE2-221ENST00000556342 IL15RAQ13261 267 aa7.09□□□□□ -1.27
SYNE2-221ENST00000556342 RAB32Q13637 225 aa7.09□□□□□ -1.27
SYNE2-221ENST00000556342 LAGE3Q14657 143 aa7.09□□□□□ -1.27
SYNE2-221ENST00000556342 THAP6Q8TBB0 222 aa7.09□□□□□ -1.27
SYNE2-221ENST00000556342 TM2D2Q9BX73 214 aa7.09□□□□□ -1.27
SYNE2-221ENST00000556342 FBLL1A6NHQ2 334 aaKnown RBP7.08□□□□□ -1.28
SYNE2-221ENST00000556342 DIRC3C9JPN6 131 aa7.08□□□□□ -1.28
SYNE2-221ENST00000556342 GNRH2O43555 120 aa7.08□□□□□ -1.28
SYNE2-221ENST00000556342 IL7P13232 177 aa7.08□□□□□ -1.28
SYNE2-221ENST00000556342 RANP62826 216 aaKnown RBP7.08□□□□□ -1.28
SYNE2-221ENST00000556342 LELP1Q5T871 98 aa7.08□□□□□ -1.28
SYNE2-221ENST00000556342 SLC25A29Q8N8R3 303 aa7.08□□□□□ -1.28
SYNE2-221ENST00000556342 SEC22CQ9BRL7 303 aa7.08□□□□□ -1.28
SYNE2-221ENST00000556342 FAT3Q8TDW7 4589 aa7.07□□□□□ -1.28
SYNE2-221ENST00000556342 OR7C2O60412 319 aa7.07□□□□□ -1.28
SYNE2-221ENST00000556342 UBE2L3P68036 154 aaKnown RBP7.07□□□□□ -1.28
SYNE2-221ENST00000556342 RHOHQ15669 191 aa7.07□□□□□ -1.28
SYNE2-221ENST00000556342 SCXQ7RTU7 201 aa7.07□□□□□ -1.28
SYNE2-221ENST00000556342 TMED6Q8WW62 240 aa7.07□□□□□ -1.28
SYNE2-221ENST00000556342 PRADC1Q9BSG0 188 aa7.07□□□□□ -1.28
SYNE2-221ENST00000556342 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-221ENST00000556342 TRAV6A0A075B6T7 132 aa7.06□□□□□ -1.28
SYNE2-221ENST00000556342 TRAV21A0A0B4J279 112 aa7.06□□□□□ -1.28
SYNE2-221ENST00000556342 TRBV6-4A0A1B0GX49 114 aa7.06□□□□□ -1.28
SYNE2-221ENST00000556342 LECT2O14960 151 aa7.06□□□□□ -1.28
SYNE2-221ENST00000556342 PLA2G10O15496 165 aa7.06□□□□□ -1.28
SYNE2-221ENST00000556342 TCRBP04435 133 aa7.06□□□□□ -1.28
SYNE2-221ENST00000556342 TYMSP04818 313 aa7.06□□□□□ -1.28
SYNE2-221ENST00000556342 NHLH2Q02577 135 aa7.06□□□□□ -1.28
SYNE2-221ENST00000556342 GAGE13Q4V321 117 aa7.06□□□□□ -1.28
SYNE2-221ENST00000556342 OR5C1Q8NGR4 320 aa7.06□□□□□ -1.28
SYNE2-221ENST00000556342 SDF2L1Q9HCN8 221 aa7.06□□□□□ -1.28
SYNE2-221ENST00000556342 KCNIP2Q9NS61 270 aa7.06□□□□□ -1.28
SYNE2-221ENST00000556342 LYRM1O43325 122 aa7.05□□□□□ -1.28
SYNE2-221ENST00000556342 CIDEAO60543 219 aa7.05□□□□□ -1.28
SYNE2-221ENST00000556342 OXTP01178 125 aa7.05□□□□□ -1.28
SYNE2-221ENST00000556342 KRTAP10-4P60372 401 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-221ENST00000556342 LINC01620Q4KN68 170 aa7.05□□□□□ -1.28
SYNE2-221ENST00000556342 CFAP126Q5VTH2 177 aa7.05□□□□□ -1.28
SYNE2-221ENST00000556342 ATP6V0E2Q8NHE4 81 aa7.05□□□□□ -1.28
SYNE2-221ENST00000556342 HYLS1Q96M11 299 aa7.05□□□□□ -1.28
SYNE2-221ENST00000556342 ATP5SQ99766 215 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms