RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 TNP2Q05952 138 aa8.68□□□□□ -1.02
SNX6-207ENST00000556303 SDF2L1Q9HCN8 221 aa8.68□□□□□ -1.02
SNX6-207ENST00000556303 IGHV3-16A0A0C4DH30 117 aa8.67□□□□□ -1.02
SNX6-207ENST00000556303 A0A1W2PRE2 83 aa8.67□□□□□ -1.02
SNX6-207ENST00000556303 TAAR5O14804 337 aa8.67□□□□□ -1.02
SNX6-207ENST00000556303 SIVA1O15304 175 aa8.67□□□□□ -1.02
SNX6-207ENST00000556303 EIF3GO75821 320 aaKnown RBP eCLIP8.67□□□□□ -1.02
SNX6-207ENST00000556303 IGHV3-53P01767 116 aa8.67□□□□□ -1.02
SNX6-207ENST00000556303 TCRAP04437 139 aa8.67□□□□□ -1.02
SNX6-207ENST00000556303 NEGR1Q7Z3B1 354 aa8.67□□□□□ -1.02
SNX6-207ENST00000556303 TVP23CQ96ET8 276 aa8.67□□□□□ -1.02
SNX6-207ENST00000556303 NKX6-2Q9C056 277 aaPredicted RBP8.67□□□□□ -1.02
SNX6-207ENST00000556303 RPH3ALQ9UNE2 315 aa8.67□□□□□ -1.02
SNX6-207ENST00000556303 TRAV8-1A0A0A6YYK1 113 aa8.66□□□□□ -1.02
SNX6-207ENST00000556303 RNF222A6NCQ9 220 aa8.66□□□□□ -1.02
SNX6-207ENST00000556303 HMGB3O15347 200 aaKnown RBP8.66□□□□□ -1.02
SNX6-207ENST00000556303 Q5BKY6 102 aa8.66□□□□□ -1.02
SNX6-207ENST00000556303 SAPCD1Q5SSQ6 148 aa8.66□□□□□ -1.02
SNX6-207ENST00000556303 LYPD5Q6UWN5 251 aa8.66□□□□□ -1.02
SNX6-207ENST00000556303 SH2D6Q7Z4S9 175 aa8.66□□□□□ -1.02
SNX6-207ENST00000556303 PCNPQ8WW12 178 aaKnown RBP8.66□□□□□ -1.02
SNX6-207ENST00000556303 C8orf49Q96NF6 230 aa8.66□□□□□ -1.02
SNX6-207ENST00000556303 EPDR1Q9UM22 224 aa8.66□□□□□ -1.02
SNX6-207ENST00000556303 C9JCJ5 164 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 K7EQD1 137 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 GNRH2O43555 120 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 TYMSP04818 313 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 SRIP30626 198 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 SUMO1P63165 101 aaKnown RBP8.65□□□□□ -1.02
SNX6-207ENST00000556303 GNG5P63218 68 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 RGS21Q2M5E4 152 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 ZFP69Q49AA0 526 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 CYB561D1Q8N8Q1 229 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 TMEM75Q8N9X5 138 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 OR4C5Q8NGB2 326 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 OR2T35Q8NGX2 323 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 PTH2Q96A98 100 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 ZNF479Q96JC4 524 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 TXNDC17Q9BRA2 123 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 KRTAP1-5Q9BYS1 174 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 NAGKQ9UJ70 344 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 PSG8Q9UQ74 426 aa8.65□□□□□ -1.02
SNX6-207ENST00000556303 APOBP04114 4563 aaKnown RBP8.64□□□□□ -1.03
SNX6-207ENST00000556303 TRAV9-2A0A087WT02 112 aa8.64□□□□□ -1.03
SNX6-207ENST00000556303 FXYD6-FXYD2A0A087WZ82 144 aa8.64□□□□□ -1.03
SNX6-207ENST00000556303 CTXND1A0A1B0GTU2 59 aa8.64□□□□□ -1.03
SNX6-207ENST00000556303 C16orf90A8MZG2 172 aa8.64□□□□□ -1.03
SNX6-207ENST00000556303 F6UZH7 168 aa8.64□□□□□ -1.03
SNX6-207ENST00000556303 NXPH4O95158 308 aa8.64□□□□□ -1.03
SNX6-207ENST00000556303 PFN1P07737 140 aaKnown RBP8.64□□□□□ -1.03
SNX6-207ENST00000556303 FLI1Q01543 452 aaPredicted RBP8.64□□□□□ -1.03
SNX6-207ENST00000556303 SMUG1Q53HV7 270 aa8.64□□□□□ -1.03
SNX6-207ENST00000556303 RPL7L1Q6DKI1 246 aaKnown RBP8.64□□□□□ -1.03
SNX6-207ENST00000556303 SH3BGRL3Q9H299 93 aa8.64□□□□□ -1.03
SNX6-207ENST00000556303 GGTLC3B5MD39 225 aa8.63□□□□□ -1.03
SNX6-207ENST00000556303 IGLV2-11P01706 119 aa8.63□□□□□ -1.03
SNX6-207ENST00000556303 SFTA3P0C7M3 94 aa8.63□□□□□ -1.03
SNX6-207ENST00000556303 TIRAPP58753 221 aa8.63□□□□□ -1.03
SNX6-207ENST00000556303 AKR1C8PQ5T2L2 129 aa8.63□□□□□ -1.03
SNX6-207ENST00000556303 NFE4Q86UQ8 179 aa8.63□□□□□ -1.03
SNX6-207ENST00000556303 ZNF575Q86XF7 245 aa8.63□□□□□ -1.03
SNX6-207ENST00000556303 CDK2AP2O75956 126 aa8.62□□□□□ -1.03
SNX6-207ENST00000556303 GCGP01275 180 aa8.62□□□□□ -1.03
SNX6-207ENST00000556303 GYPEP15421 78 aa8.62□□□□□ -1.03
SNX6-207ENST00000556303 PPT1P50897 306 aa8.62□□□□□ -1.03
SNX6-207ENST00000556303 PIK3CD-AS1Q5SR53 167 aa8.62□□□□□ -1.03
SNX6-207ENST00000556303 HIST1H2BAQ96A08 127 aa8.62□□□□□ -1.03
SNX6-207ENST00000556303 LY96Q9Y6Y9 160 aa8.62□□□□□ -1.03
SNX6-207ENST00000556303 GATA1P15976 413 aaPredicted RBP8.61□□□□□ -1.03
SNX6-207ENST00000556303 ZNF80P51504 273 aaPredicted RBP8.61□□□□□ -1.03
SNX6-207ENST00000556303 LINC00315P59091 139 aa8.61□□□□□ -1.03
SNX6-207ENST00000556303 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
SNX6-207ENST00000556303 PRNTQ86SH4 94 aa8.61□□□□□ -1.03
SNX6-207ENST00000556303 SGK494Q96LW2 274 aa8.61□□□□□ -1.03
SNX6-207ENST00000556303 C9orf85Q96MD7 179 aa8.61□□□□□ -1.03
SNX6-207ENST00000556303 TCEAL7Q9BRU2 100 aa8.61□□□□□ -1.03
SNX6-207ENST00000556303 FABP5P3A8MUU1 101 aa8.6□□□□□ -1.03
SNX6-207ENST00000556303 G3V3Q6 166 aa8.6□□□□□ -1.03
SNX6-207ENST00000556303 EVI2AP22794 236 aa8.6□□□□□ -1.03
SNX6-207ENST00000556303 ZNF726P1Q15940 193 aa8.6□□□□□ -1.03
SNX6-207ENST00000556303 Q6ZRN7 208 aaPredicted RBP8.6□□□□□ -1.03
SNX6-207ENST00000556303 SPATA12Q7Z6I5 190 aa8.6□□□□□ -1.03
SNX6-207ENST00000556303 C10orf126Q8N4M7 172 aa8.6□□□□□ -1.03
SNX6-207ENST00000556303 KRTAP17-1Q9BYP8 105 aa8.6□□□□□ -1.03
SNX6-207ENST00000556303 ARL2-SNX15V9GYD0 113 aa8.6□□□□□ -1.03
SNX6-207ENST00000556303 ABCA13Q86UQ4 5058 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 TRBV6-4A0A1B0GX49 114 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 FAM74A7A6NL05 159 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 PEX7O00628 323 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 EREGO14944 169 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 RS1O15537 224 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 IFNA7P01567 189 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 DNAH10OSP0CZ25 163 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 FHITP49789 147 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 ZNF345Q14585 488 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 CFAP126Q5VTH2 177 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 COX8CQ7Z4L0 72 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 PRADC1Q9BSG0 188 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 C11orf21Q9P2W6 132 aa8.59□□□□□ -1.03
SNX6-207ENST00000556303 ZFP30Q9Y2G7 519 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms