RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 UNC79Q9P2D8 2635 aa6.21□□□□□ -1.41
ATXN3-235ENST00000556082 TMSB15BA0A087X1C1 80 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 TRAV21A0A0B4J279 112 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 KLLNB2CW77 178 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 SNAI2O43623 268 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 ZNF324O75467 553 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-235ENST00000556082 PMCHP20382 165 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 HILS1P60008 231 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 SNRPD3P62318 126 aaKnown RBP6.21□□□□□ -1.42
ATXN3-235ENST00000556082 CACNG7P62955 275 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 IQCJQ1A5X6 159 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 NIT1Q86X76 327 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 DPF1Q92782 380 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 RCHY1Q96PM5 261 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 CDIP1Q9H305 208 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 GSN-AS1Q9NRJ2 163 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 C11orf21Q9P2W6 132 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 PEMTQ9UBM1 199 aa6.21□□□□□ -1.42
ATXN3-235ENST00000556082 DUSP14O95147 198 aaKnown RBP6.2□□□□□ -1.42
ATXN3-235ENST00000556082 NDUFA7O95182 113 aa6.2□□□□□ -1.42
ATXN3-235ENST00000556082 PPBPP02775 128 aa6.2□□□□□ -1.42
ATXN3-235ENST00000556082 RAB4AP20338 218 aa6.2□□□□□ -1.42
ATXN3-235ENST00000556082 NTF3P20783 257 aa6.2□□□□□ -1.42
ATXN3-235ENST00000556082 EDN2P20800 178 aa6.2□□□□□ -1.42
ATXN3-235ENST00000556082 ADAMTSL5Q6ZMM2 481 aa6.2□□□□□ -1.42
ATXN3-235ENST00000556082 Q6ZWC4 215 aa6.2□□□□□ -1.42
ATXN3-235ENST00000556082 OR11H1Q8NG94 326 aa6.2□□□□□ -1.42
ATXN3-235ENST00000556082 OR9G4Q8NGQ1 327 aa6.2□□□□□ -1.42
ATXN3-235ENST00000556082 ZNF418Q8TF45 676 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-235ENST00000556082 SAMD10Q9BYL1 202 aa6.2□□□□□ -1.42
ATXN3-235ENST00000556082 MXRA5Q9NR99 2828 aa6.2□□□□□ -1.42
ATXN3-235ENST00000556082 A0A0J9YX75 114 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 HSBP1O75506 76 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 CSN3P07498 182 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 LINC00614P0C842 121 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 ZNF705DP0CH99 300 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-235ENST00000556082 ZNF705BP0CI00 300 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-235ENST00000556082 LEPP41159 167 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 AMTP48728 403 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 FHL3Q13643 280 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 TWIST1Q15672 202 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 PRR9Q5T870 116 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 URB1-AS1Q96HZ7 61 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 TPPP3Q9BW30 176 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 SCRT2Q9NQ03 307 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 SIGLEC8Q9NYZ4 499 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 LAMTOR2Q9Y2Q5 125 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 CELSR1Q9NYQ6 3014 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 CCDC168Q8NDH2 2452 aa6.19□□□□□ -1.42
ATXN3-235ENST00000556082 CSMD2Q7Z408 3487 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 IGKV3-7A0A075B6H7 116 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 TRAV25A0A0B4J276 109 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 A8MTW9 85 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 SRD5A1P18405 259 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 TSPOP30536 169 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 EBLN2Q6P2I7 272 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 FOXI2Q6ZQN5 318 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 C18orf65Q6ZTR6 163 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 ORMDL3Q8N138 153 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 DEFB125Q8N687 156 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 LINC01006Q8NI28 216 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 KRTAP17-1Q9BYP8 105 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 NAGKQ9UJ70 344 aa6.18□□□□□ -1.42
ATXN3-235ENST00000556082 PCP4L1A6NKN8 68 aa6.17□□□□□ -1.42
ATXN3-235ENST00000556082 F6UB75 175 aa6.17□□□□□ -1.42
ATXN3-235ENST00000556082 ZNF688P0C7X2 276 aa6.17□□□□□ -1.42
ATXN3-235ENST00000556082 RNASE4P34096 147 aaKnown RBP6.17□□□□□ -1.42
ATXN3-235ENST00000556082 PKIAP61925 76 aa6.17□□□□□ -1.42
ATXN3-235ENST00000556082 DEFB114Q30KQ6 69 aa6.17□□□□□ -1.42
ATXN3-235ENST00000556082 TDRG1Q3Y452 100 aa6.17□□□□□ -1.42
ATXN3-235ENST00000556082 MRPL51Q4U2R6 128 aaKnown RBP6.17□□□□□ -1.42
ATXN3-235ENST00000556082 PSMG4Q5JS54 123 aa6.17□□□□□ -1.42
ATXN3-235ENST00000556082 SMIM15Q7Z3B0 74 aa6.17□□□□□ -1.42
ATXN3-235ENST00000556082 AMN1Q8IY45 258 aa6.17□□□□□ -1.42
ATXN3-235ENST00000556082 KLHL30-AS1Q8NEE0 82 aa6.17□□□□□ -1.42
ATXN3-235ENST00000556082 DLX4Q92988 240 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-235ENST00000556082 RNF185Q96GF1 192 aa6.17□□□□□ -1.42
ATXN3-235ENST00000556082 TSSC4Q9Y5U2 329 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-235ENST00000556082 CSMD1Q96PZ7 3565 aa6.17□□□□□ -1.42
ATXN3-235ENST00000556082 FLNAP21333 2647 aaKnown RBP6.16□□□□□ -1.42
ATXN3-235ENST00000556082 LINC01546A6NGU7 62 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 PRSS47A8MTI9 375 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 D6R8Y8 96 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 M0R2Z0 102 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 CCL24O00175 119 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 NXPH4O95158 308 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 LY6G6DO95868 133 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 SCGB1D1O95968 90 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 CKS2P33552 79 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 ASIPP42127 132 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 DEFB1P60022 68 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 DEFB136Q30KP8 78 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 ANXA2RQ3ZCQ2 193 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 RNASEKQ6P5S7 137 aaKnown RBP6.16□□□□□ -1.42
ATXN3-235ENST00000556082 Q6ZQT7 251 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 FAM19A2Q8N3H0 131 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 RAX2Q96IS3 184 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 PRELID3AQ96N28 172 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 CLUHP3Q96NS8 147 aa6.16□□□□□ -1.42
ATXN3-235ENST00000556082 ZNF747Q9BV97 191 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms