RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 NBEAL2Q6ZNJ1 2754 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 CXorf65A6NEN9 183 aa5.5□□□□□ -1.53
TDP1-214ENST00000556063 LYRM9A8MSI8 78 aa5.5□□□□□ -1.53
TDP1-214ENST00000556063 DEFB4AO15263 64 aa5.5□□□□□ -1.53
TDP1-214ENST00000556063 SH2D1AO60880 128 aa5.5□□□□□ -1.53
TDP1-214ENST00000556063 S100A4P26447 101 aaKnown RBP5.5□□□□□ -1.53
TDP1-214ENST00000556063 SMCPP49901 116 aaPredicted RBP5.5□□□□□ -1.53
TDP1-214ENST00000556063 ZNF80P51504 273 aaPredicted RBP5.5□□□□□ -1.53
TDP1-214ENST00000556063 PRR27Q6MZM9 219 aa5.5□□□□□ -1.53
TDP1-214ENST00000556063 UQCC3Q6UW78 93 aa5.5□□□□□ -1.53
TDP1-214ENST00000556063 RNASE8Q8TDE3 154 aaKnown RBP5.5□□□□□ -1.53
TDP1-214ENST00000556063 TIMM8BQ9Y5J9 83 aaPredicted RBP5.5□□□□□ -1.53
TDP1-214ENST00000556063 LY96Q9Y6Y9 160 aa5.5□□□□□ -1.53
TDP1-214ENST00000556063 CMYA5Q8N3K9 4069 aa5.49□□□□□ -1.53
TDP1-214ENST00000556063 TENM3Q9P273 2699 aa5.49□□□□□ -1.53
TDP1-214ENST00000556063 XKRY2A2RUG3 117 aa5.49□□□□□ -1.53
TDP1-214ENST00000556063 B4DEV8 164 aa5.49□□□□□ -1.53
TDP1-214ENST00000556063 AZU1P20160 251 aa5.49□□□□□ -1.53
TDP1-214ENST00000556063 ASIPP42127 132 aa5.49□□□□□ -1.53
TDP1-214ENST00000556063 TCL1AP56279 114 aa5.49□□□□□ -1.53
TDP1-214ENST00000556063 RPS20P60866 119 aaKnown RBP5.49□□□□□ -1.53
TDP1-214ENST00000556063 OR5I1Q13606 314 aa5.49□□□□□ -1.53
TDP1-214ENST00000556063 TMEM241Q24JQ0 296 aa5.49□□□□□ -1.53
TDP1-214ENST00000556063 C11orf45Q8TAV5 145 aa5.49□□□□□ -1.53
TDP1-214ENST00000556063 WWC2-AS2Q96NR7 200 aa5.49□□□□□ -1.53
TDP1-214ENST00000556063 SPXQ9BT56 116 aa5.49□□□□□ -1.53
TDP1-214ENST00000556063 EDA2RQ9HAV5 297 aa5.49□□□□□ -1.53
TDP1-214ENST00000556063 TRBV20OR9-2A0A075B6H5 130 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 M0R036 132 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 IGLV2-8P01709 118 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 P01737 135 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 CRIP1P50238 77 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 DAD1P61803 113 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 SRSF3P84103 164 aaKnown RBP5.48□□□□□ -1.53
TDP1-214ENST00000556063 DAZ2Q13117 558 aaKnown RBP5.48□□□□□ -1.53
TDP1-214ENST00000556063 LINC01559Q495D7 138 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 FAM222AQ5U5X8 452 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 Q6ZQT7 251 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 COMMD7Q86VX2 200 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 OCC1Q8TAD7 63 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 KRTAP9-2Q9BYQ4 174 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 NOP10Q9NPE3 64 aaKnown RBP5.48□□□□□ -1.53
TDP1-214ENST00000556063 GSN-AS1Q9NRJ2 163 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 DKK2Q9UBU2 259 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 NAT8Q9UHE5 227 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 TP53TG3Q9ULZ0 132 aa5.48□□□□□ -1.53
TDP1-214ENST00000556063 IGKV3D-20A0A0C4DH25 116 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 IGHV3-16A0A0C4DH30 117 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 KRTAP9-6A0A140TA67 174 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 LINC00862A6NCI5 91 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 PGPEP1LA6NFU8 196 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 KRBOX1C9JBD0 128 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 C9JQL5 133 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 GNRH2O43555 120 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 PRM2P04554 102 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 TYMSP04818 313 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 CXCL1P09341 107 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 SFTA3P0C7M3 94 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 ERVFC1-1P60608 527 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 LGALS9BQ3B8N2 356 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 C15orf54Q8N8G6 183 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 C11orf72Q8NBR9 251 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 OR2D3Q8NGH3 330 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 MDFICQ9P1T7 246 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 C11orf21Q9P2W6 132 aa5.47□□□□□ -1.53
TDP1-214ENST00000556063 MUC4Q99102 2169 aa5.46□□□□□ -1.53
TDP1-214ENST00000556063 TRGV2A0A075B6R0 118 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 TMSB15BA0A087X1C1 80 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 TRGV1A0A0A0MS02 117 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 PLAC8L1A1L4L8 177 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 C19orf71A6NCJ1 209 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 M0R2P5 195 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 GATCO43716 136 aaKnown RBP5.46□□□□□ -1.54
TDP1-214ENST00000556063 DEFB130BP0DP73 79 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 DEFB130AP0DP74 79 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 MED14OSP0DP75 135 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 PNRC1Q12796 327 aaPredicted RBP5.46□□□□□ -1.54
TDP1-214ENST00000556063 ADIRFQ15847 76 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 DNLZQ5SXM8 178 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 FAM231DQ6ZW35 169 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 LINC01551Q86U37 167 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 SYT8Q8NBV8 401 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 NDUFAF3Q9BU61 184 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 IL36BQ9NZH7 164 aa5.46□□□□□ -1.54
TDP1-214ENST00000556063 TGP01266 2768 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 TRAV10A0A0B4J240 114 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 A0A1W2PPQ1 181 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 GAGE12BA1L429 117 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 TMEM218A2RU14 115 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 GRIFINA4D1Z8 144 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 A8MWL6 223 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 K7EN84 100 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 SPINK4O60575 86 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 GAGE7O76087 117 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 ARMS2P0C7Q2 107 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 GAGE12FP0CL80 117 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 GAGE12GP0CL81 117 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 GAGE12IP0CL82 117 aa5.45□□□□□ -1.54
TDP1-214ENST00000556063 NANOS2P60321 138 aaKnown RBP5.45□□□□□ -1.54
TDP1-214ENST00000556063 RPL23P62829 140 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms