RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 UBE2L3P68036 154 aaKnown RBP9.53□□□□□ -0.88
CHMP4BP1-201ENST00000556017 SLC25A29Q8N8R3 303 aa9.53□□□□□ -0.88
CHMP4BP1-201ENST00000556017 NMES1Q9C002 83 aa9.52□□□□□ -0.89
CHMP4BP1-201ENST00000556017 Q9HAA7 133 aa9.52□□□□□ -0.89
CHMP4BP1-201ENST00000556017 NAGKQ9UJ70 344 aa9.52□□□□□ -0.89
CHMP4BP1-201ENST00000556017 FAM240BA0A1B0GVZ2 78 aa9.51□□□□□ -0.89
CHMP4BP1-201ENST00000556017 F6UZH7 168 aa9.51□□□□□ -0.89
CHMP4BP1-201ENST00000556017 H2BFSP57053 126 aa9.51□□□□□ -0.89
CHMP4BP1-201ENST00000556017 KRTAP10-4P60372 401 aaPredicted RBP9.51□□□□□ -0.89
CHMP4BP1-201ENST00000556017 LRRC37A5PQ49AS3 106 aa9.51□□□□□ -0.89
CHMP4BP1-201ENST00000556017 FFAR4Q5NUL3 377 aa9.51□□□□□ -0.89
CHMP4BP1-201ENST00000556017 CFAP126Q5VTH2 177 aa9.51□□□□□ -0.89
CHMP4BP1-201ENST00000556017 SH2D6Q7Z4S9 175 aa9.51□□□□□ -0.89
CHMP4BP1-201ENST00000556017 NHLRC2Q8NBF2 726 aa9.51□□□□□ -0.89
CHMP4BP1-201ENST00000556017 HYLS1Q96M11 299 aa9.51□□□□□ -0.89
CHMP4BP1-201ENST00000556017 ATP5SQ99766 215 aa9.51□□□□□ -0.89
CHMP4BP1-201ENST00000556017 CCDC32Q9BV29 185 aa9.51□□□□□ -0.89
CHMP4BP1-201ENST00000556017 OTORQ9NRC9 128 aa9.51□□□□□ -0.89
CHMP4BP1-201ENST00000556017 PGPA6NDG6 321 aa9.5□□□□□ -0.89
CHMP4BP1-201ENST00000556017 RS1O15537 224 aa9.5□□□□□ -0.89
CHMP4BP1-201ENST00000556017 C1QBP02746 253 aa9.5□□□□□ -0.89
CHMP4BP1-201ENST00000556017 ZNF80P51504 273 aaPredicted RBP9.5□□□□□ -0.89
CHMP4BP1-201ENST00000556017 ASAH1Q13510 395 aa9.5□□□□□ -0.89
CHMP4BP1-201ENST00000556017 GOLT1AQ6ZVE7 132 aa9.5□□□□□ -0.89
CHMP4BP1-201ENST00000556017 KCNIP2Q9NS61 270 aa9.5□□□□□ -0.89
CHMP4BP1-201ENST00000556017 PKHD1L1Q86WI1 4243 aa9.5□□□□□ -0.89
CHMP4BP1-201ENST00000556017 TRAV21A0A0B4J279 112 aa9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 KRTAP29-1A8MX34 341 aaPredicted RBP9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 PSCAO43653 123 aa9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 IGHV3-30P01768 117 aa9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 IGHV3-33P01772 117 aa9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 IGHV3-30-3P0DP02 117 aa9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 IGHV3-30-5P0DP03 117 aa9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 GNG5P63218 68 aa9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 KHDC3LQ587J8 217 aa9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 C9orf85Q96MD7 179 aa9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 WFDC1Q9HC57 220 aa9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 MBD2Q9UBB5 411 aa9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 Q9UF83 564 aa9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 HSPB11Q9Y547 144 aa9.49□□□□□ -0.89
CHMP4BP1-201ENST00000556017 FBLL1A6NHQ2 334 aaKnown RBP9.48□□□□□ -0.89
CHMP4BP1-201ENST00000556017 C17orf112F2Z3M2 114 aa9.48□□□□□ -0.89
CHMP4BP1-201ENST00000556017 LINC00694P0DN24 101 aa9.48□□□□□ -0.89
CHMP4BP1-201ENST00000556017 PPT1P50897 306 aa9.48□□□□□ -0.89
CHMP4BP1-201ENST00000556017 ZNF876PQ49A33 203 aa9.48□□□□□ -0.89
CHMP4BP1-201ENST00000556017 LELP1Q5T871 98 aa9.48□□□□□ -0.89
CHMP4BP1-201ENST00000556017 ARL6IP6Q8N6S5 226 aa9.48□□□□□ -0.89
CHMP4BP1-201ENST00000556017 TMEM75Q8N9X5 138 aa9.48□□□□□ -0.89
CHMP4BP1-201ENST00000556017 SGK494Q96LW2 274 aa9.48□□□□□ -0.89
CHMP4BP1-201ENST00000556017 TREM1Q9NP99 234 aa9.48□□□□□ -0.89
CHMP4BP1-201ENST00000556017 RPH3ALQ9UNE2 315 aa9.48□□□□□ -0.89
CHMP4BP1-201ENST00000556017 IGHV3-73A0A0B4J1V6 119 aa9.47□□□□□ -0.89
CHMP4BP1-201ENST00000556017 TRBV6-4A0A1B0GX49 114 aa9.47□□□□□ -0.89
CHMP4BP1-201ENST00000556017 PGPEP1LA6NFU8 196 aa9.47□□□□□ -0.89
CHMP4BP1-201ENST00000556017 IGLV2-11P01706 119 aa9.47□□□□□ -0.89
CHMP4BP1-201ENST00000556017 PFN1P07737 140 aaKnown RBP9.47□□□□□ -0.89
CHMP4BP1-201ENST00000556017 IFITM3Q01628 133 aa9.47□□□□□ -0.89
CHMP4BP1-201ENST00000556017 LAGE3Q14657 143 aa9.47□□□□□ -0.89
CHMP4BP1-201ENST00000556017 OR10J3Q5JRS4 329 aa9.47□□□□□ -0.89
CHMP4BP1-201ENST00000556017 PPP1R1CQ8WVI7 109 aa9.47□□□□□ -0.89
CHMP4BP1-201ENST00000556017 ASB13Q8WXK3 278 aa9.47□□□□□ -0.89
CHMP4BP1-201ENST00000556017 SDF2L1Q9HCN8 221 aa9.47□□□□□ -0.89
CHMP4BP1-201ENST00000556017 HMCN2Q8NDA2 5059 aa9.47□□□□□ -0.89
CHMP4BP1-201ENST00000556017 TRAV8-6A0A0B4J262 113 aa9.46□□□□□ -0.9
CHMP4BP1-201ENST00000556017 J3QL48 77 aa9.46□□□□□ -0.9
CHMP4BP1-201ENST00000556017 RNASE3P12724 160 aaKnown RBP9.46□□□□□ -0.9
CHMP4BP1-201ENST00000556017 LINC00528Q8N1L1 170 aa9.46□□□□□ -0.9
CHMP4BP1-201ENST00000556017 SMIM3Q9BZL3 60 aa9.46□□□□□ -0.9
CHMP4BP1-201ENST00000556017 GTSF1LQ9H1H1 148 aa9.46□□□□□ -0.9
CHMP4BP1-201ENST00000556017 MPC2O95563 127 aa9.45□□□□□ -0.9
CHMP4BP1-201ENST00000556017 TAS2R45P59539 299 aa9.45□□□□□ -0.9
CHMP4BP1-201ENST00000556017 RAB2AP61019 212 aa9.45□□□□□ -0.9
CHMP4BP1-201ENST00000556017 RHOHQ15669 191 aa9.45□□□□□ -0.9
CHMP4BP1-201ENST00000556017 LINC01620Q4KN68 170 aa9.45□□□□□ -0.9
CHMP4BP1-201ENST00000556017 ZNF506Q5JVG8 444 aa9.45□□□□□ -0.9
CHMP4BP1-201ENST00000556017 KCNS1Q96KK3 526 aa9.45□□□□□ -0.9
CHMP4BP1-201ENST00000556017 DNAJC30Q96LL9 226 aa9.45□□□□□ -0.9
CHMP4BP1-201ENST00000556017 LECT2O14960 151 aa9.44□□□□□ -0.9
CHMP4BP1-201ENST00000556017 HMGB3O15347 200 aaKnown RBP9.44□□□□□ -0.9
CHMP4BP1-201ENST00000556017 CYCSP99999 105 aaKnown RBP9.44□□□□□ -0.9
CHMP4BP1-201ENST00000556017 UFSP1Q6NVU6 142 aa9.44□□□□□ -0.9
CHMP4BP1-201ENST00000556017 MZT2BQ6NZ67 158 aa9.44□□□□□ -0.9
CHMP4BP1-201ENST00000556017 PQLC2Q6ZP29 291 aa9.44□□□□□ -0.9
CHMP4BP1-201ENST00000556017 DAZ4Q86SG3 579 aaKnown RBP9.44□□□□□ -0.9
CHMP4BP1-201ENST00000556017 ATP6V0E2Q8NHE4 81 aa9.44□□□□□ -0.9
CHMP4BP1-201ENST00000556017 CMTM2Q8TAZ6 248 aa9.44□□□□□ -0.9
CHMP4BP1-201ENST00000556017 SUN5Q8TC36 379 aa9.44□□□□□ -0.9
CHMP4BP1-201ENST00000556017 PTH2Q96A98 100 aa9.44□□□□□ -0.9
CHMP4BP1-201ENST00000556017 PRADC1Q9BSG0 188 aa9.44□□□□□ -0.9
CHMP4BP1-201ENST00000556017 DAZ3Q9NR90 486 aaKnown RBP9.44□□□□□ -0.9
CHMP4BP1-201ENST00000556017 CIDEAO60543 219 aa9.43□□□□□ -0.9
CHMP4BP1-201ENST00000556017 RPL12P30050 165 aaKnown RBP9.43□□□□□ -0.9
CHMP4BP1-201ENST00000556017 SCXQ7RTU7 201 aa9.43□□□□□ -0.9
CHMP4BP1-201ENST00000556017 TCRAP04437 139 aa9.42□□□□□ -0.9
CHMP4BP1-201ENST00000556017 ARL14EPLP0DKL9 152 aa9.42□□□□□ -0.9
CHMP4BP1-201ENST00000556017 LINC00299Q6ZSB3 139 aa9.42□□□□□ -0.9
CHMP4BP1-201ENST00000556017 LINC00479Q96M42 142 aa9.42□□□□□ -0.9
CHMP4BP1-201ENST00000556017 PARLQ9H300 379 aa9.42□□□□□ -0.9
CHMP4BP1-201ENST00000556017 JPT2Q9H910 190 aa9.42□□□□□ -0.9
CHMP4BP1-201ENST00000556017 BOLA1Q9Y3E2 137 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms