RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 SNAI2O43623 268 aa7.57□□□□□ -1.2
EFCAB11-209ENST00000556005 PPBPP02775 128 aa7.57□□□□□ -1.2
EFCAB11-209ENST00000556005 CKS2P33552 79 aa7.57□□□□□ -1.2
EFCAB11-209ENST00000556005 MRPL51Q4U2R6 128 aaKnown RBP7.57□□□□□ -1.2
EFCAB11-209ENST00000556005 EBLN2Q6P2I7 272 aa7.57□□□□□ -1.2
EFCAB11-209ENST00000556005 Q6ZQT7 251 aa7.57□□□□□ -1.2
EFCAB11-209ENST00000556005 ZNF664Q8N3J9 261 aa7.57□□□□□ -1.2
EFCAB11-209ENST00000556005 PRSS3P2Q8NHM4 247 aa7.57□□□□□ -1.2
EFCAB11-209ENST00000556005 ODF3Q96PU9 254 aa7.57□□□□□ -1.2
EFCAB11-209ENST00000556005 IGHV4-4A0A075B6R2 117 aa7.56□□□□□ -1.2
EFCAB11-209ENST00000556005 KLLNB2CW77 178 aa7.56□□□□□ -1.2
EFCAB11-209ENST00000556005 CSN3P07498 182 aa7.56□□□□□ -1.2
EFCAB11-209ENST00000556005 S100A4P26447 101 aaKnown RBP7.56□□□□□ -1.2
EFCAB11-209ENST00000556005 SPANXN1Q5VSR9 72 aa7.56□□□□□ -1.2
EFCAB11-209ENST00000556005 ADAMTSL5Q6ZMM2 481 aa7.56□□□□□ -1.2
EFCAB11-209ENST00000556005 C16orf95Q9H693 158 aa7.56□□□□□ -1.2
EFCAB11-209ENST00000556005 AKAP9Q99996 3911 aa7.56□□□□□ -1.2
EFCAB11-209ENST00000556005 IGHV1-24A0A0C4DH33 117 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 A0A0J9YX75 114 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 LINC00587B1AMM8 73 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 C3orf79P0CE67 100 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 LEPP41159 167 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 ASIPP42127 132 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 ANXA2RQ3ZCQ2 193 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 FA2HQ7L5A8 372 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 OR10AG1Q8NH19 301 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 DLX4Q92988 240 aaPredicted RBP7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 AP5S1Q9NUS5 200 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 SONP18583 2426 aaKnown RBP7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 TRAV2A0A0B4J234 112 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 H3BVH4 76 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 DUSP14O95147 198 aaKnown RBP7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 LEPROTL1O95214 131 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 MED14OSP0DP75 135 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 BTF3P20290 206 aaKnown RBP7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 RNF185Q96GF1 192 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 DUX3Q96PT4 197 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 PRO1933Q9H354 126 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 LAMTOR2Q9Y2Q5 125 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 RNF114Q9Y508 228 aa7.55□□□□□ -1.2
EFCAB11-209ENST00000556005 TCF21O43680 179 aa7.54□□□□□ -1.2
EFCAB11-209ENST00000556005 TSPOP30536 169 aa7.54□□□□□ -1.2
EFCAB11-209ENST00000556005 HILS1P60008 231 aa7.54□□□□□ -1.2
EFCAB11-209ENST00000556005 KIR3DS1Q14943 382 aa7.54□□□□□ -1.2
EFCAB11-209ENST00000556005 PMCHL1Q16048 86 aa7.54□□□□□ -1.2
EFCAB11-209ENST00000556005 FAM159AQ6UWV7 190 aa7.54□□□□□ -1.2
EFCAB11-209ENST00000556005 TEX43Q6ZNM6 134 aa7.54□□□□□ -1.2
EFCAB11-209ENST00000556005 FOXI2Q6ZQN5 318 aa7.54□□□□□ -1.2
EFCAB11-209ENST00000556005 LINC01006Q8NI28 216 aa7.54□□□□□ -1.2
EFCAB11-209ENST00000556005 LOC389332A0A1B0GUA5 103 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 C7orf71A4D174 169 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 EVI2AP22794 236 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 IFI27P40305 119 aaPredicted RBP7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 DYNLRB2Q8TF09 96 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 JMJD8Q96S16 334 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 SIGLEC8Q9NYZ4 499 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 PHLDA3Q9Y5J5 127 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 TIMM8BQ9Y5J9 83 aaPredicted RBP7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 MYO9AB2RTY4 2548 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 GCN1Q92616 2671 aaKnown RBP7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 GNRH2O43555 120 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 NPYP01303 97 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 CD28P10747 220 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 DDTP30046 118 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 CDKN1BP46527 198 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 Q8N976 141 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 TMEM70Q9BUB7 260 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 SCRT2Q9NQ03 307 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 HSPB8Q9UJY1 196 aa7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 TSSC4Q9Y5U2 329 aaPredicted RBP7.53□□□□□ -1.2
EFCAB11-209ENST00000556005 TRAV12-3A0A0B4J271 114 aa7.52□□□□□ -1.21
EFCAB11-209ENST00000556005 SMKR1H3BMG3 65 aa7.52□□□□□ -1.21
EFCAB11-209ENST00000556005 C11orf44Q8N8P7 122 aa7.52□□□□□ -1.21
EFCAB11-209ENST00000556005 RAX2Q96IS3 184 aa7.52□□□□□ -1.21
EFCAB11-209ENST00000556005 SMR3AQ99954 134 aa7.52□□□□□ -1.21
EFCAB11-209ENST00000556005 VAMP8Q9BV40 100 aa7.52□□□□□ -1.21
EFCAB11-209ENST00000556005 MAP1LC3AQ9H492 121 aa7.52□□□□□ -1.21
EFCAB11-209ENST00000556005 ANK3Q12955 4377 aaKnown RBP7.52□□□□□ -1.21
EFCAB11-209ENST00000556005 A0A1W2PRX2 142 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 M0R381 172 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 CCL24O00175 119 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 CRXO43186 299 aaPredicted RBP7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 TNFRSF6BO95407 300 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 NCR2O95944 276 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 IGKV3-20P01619 116 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 FHL3Q13643 280 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 DEFB114Q30KQ6 69 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 TDRG1Q3Y452 100 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 TMEM61Q8N0U2 210 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 CITED2Q99967 270 aaPredicted RBP7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 MAP1LC3CQ9BXW4 147 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 ACANP16112 2415 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 LY6G6DO95868 133 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 RNASE3P12724 160 aaKnown RBP7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 DEFB131AP59861 70 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 DEFA6Q01524 100 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 HIST2H2BDQ6DRA6 164 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 CUBNO60494 3623 aa7.51□□□□□ -1.21
EFCAB11-209ENST00000556005 TRAV12-2A0A075B6T6 113 aa7.5□□□□□ -1.21
EFCAB11-209ENST00000556005 TRAV25A0A0B4J276 109 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms