RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 PCP4P48539 62 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 CRIP2P52943 208 aaPredicted RBP5.35□□□□□ -1.55
TDP1-213ENST00000555880 RBX1P62877 108 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 SRSF1Q07955 248 aaKnown RBP eCLIP5.35□□□□□ -1.55
TDP1-213ENST00000555880 FOXE3Q13461 319 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 KIR3DS1Q14943 382 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 RNF151Q2KHN1 245 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 ADAMTSL5Q6ZMM2 481 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 PCP2Q8IVA1 136 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 LINC00477Q96M19 166 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 PIMREGQ9BSJ6 248 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 CST9LQ9H4G1 147 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 A0A0G2JLM5 398 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 IGHV7-4-1A0A0J9YVY3 117 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 GAGE12BA1L429 117 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 PRSS47A8MTI9 375 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 GAS8-AS1O95177 125 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 GATA1P15976 413 aaPredicted RBP5.34□□□□□ -1.55
TDP1-213ENST00000555880 S100A4P26447 101 aaKnown RBP5.34□□□□□ -1.55
TDP1-213ENST00000555880 PLNP26678 52 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 GLMPQ8WWB7 406 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 USMG5Q96IX5 58 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 ZMAT4Q9H898 229 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 HIGD1BQ9P298 99 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 IGLV2-18A0A075B6J9 118 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 IGHV3OR16-10A0A075B7F0 116 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 TRAV26-2A0A0B4J265 109 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 TRAV21A0A0B4J279 112 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.34□□□□□ -1.55
TDP1-213ENST00000555880 H3BUA1 57 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 H3BUT2 72 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 K7ERU9 68 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 HLA-DRB4P13762 266 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 ASIPP42127 132 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 RPL11P62913 178 aaKnown RBP5.34□□□□□ -1.55
TDP1-213ENST00000555880 ORMDL2Q53FV1 153 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 OCIAD2Q56VL3 154 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 C19orf54Q5BKX5 351 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 NRACQ8N912 160 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 HLA-DRB4X5D2U9 266 aa5.34□□□□□ -1.55
TDP1-213ENST00000555880 TRAV40A0A0B4J280 105 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 IGHV4-39P01824 125 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 IGF1P05019 195 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 SMIM13P0DJ93 91 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 GCSHP23434 173 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 ZC2HC1BQ5TFG8 222 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 BRD3OSQ6XYD6 125 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 VPS25Q9BRG1 176 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 CHAC1Q9BUX1 264 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 SMIM2Q9BVW6 85 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 TMEM160Q9NX00 188 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 LINC00527Q9UJ94 153 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 HHLA3Q9XRX5 114 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 PHLDA3Q9Y5J5 127 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 ABCA2Q9BZC7 2435 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 ASH1LQ9NR48 2969 aaKnown RBP5.33□□□□□ -1.56
TDP1-213ENST00000555880 RELNP78509 3460 aa5.33□□□□□ -1.56
TDP1-213ENST00000555880 A0A087WX48 190 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 J3KRW8 73 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 K7EMI3 77 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 K7EP34 96 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 M0R381 172 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 PPP1R17O96001 155 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 PF4V1P10720 104 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 FABP2P12104 132 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 SLC25A16P16260 332 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 GTSCR1Q86UQ5 136 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 OR5A1Q8NGJ0 315 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 RAB37Q96AX2 223 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 C20orf173Q96LM9 149 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 C20orf78Q9BR46 151 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 MEGF9Q9H1U4 602 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 DPH3P1Q9H4G8 78 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 MRPL35Q9NZE8 188 aaKnown RBP5.32□□□□□ -1.56
TDP1-213ENST00000555880 ITPR1Q14643 2758 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 ACACBO00763 2458 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 SPTAN1Q13813 2472 aaKnown RBP5.32□□□□□ -1.56
TDP1-213ENST00000555880 IGKV2D-26A0A0A0MRZ7 120 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 A0A1W2PPM0 123 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 C19orf84I3L1E1 186 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 NDUFS8O00217 210 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 BRI3O95415 125 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 MED14OSP0DP75 135 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 RNASE4P34096 147 aaKnown RBP5.32□□□□□ -1.56
TDP1-213ENST00000555880 SUMO2P61956 95 aaKnown RBP5.32□□□□□ -1.56
TDP1-213ENST00000555880 LY6EQ16553 131 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 C21orf62-AS1Q17RA5 79 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 PRR9Q5T870 116 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 SAMD13Q5VXD3 122 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 CLEC2AQ6UVW9 174 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 UNQ9165/PRO28630Q6UXU0 137 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 ZFAND2AQ8N6M9 145 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 CCL19Q99731 98 aa5.32□□□□□ -1.56
TDP1-213ENST00000555880 TRBV25-1A0A075B6N4 114 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 TRAV12-1A0A0B4J245 112 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 TRBV7-9A0A0J9YWB2 115 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 H3BUX3 64 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 H7C1H1 209 aa5.31□□□□□ -1.56
TDP1-213ENST00000555880 TRBV12-3P01733 135 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms