RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 C19orf71A6NCJ1 209 aa7.5□□□□□ -1.21
NEK9-205ENST00000555405 DEFB4AO15263 64 aa7.5□□□□□ -1.21
NEK9-205ENST00000555405 KRTAP10-11P60412 298 aa7.5□□□□□ -1.21
NEK9-205ENST00000555405 ELOBQ15370 118 aa7.5□□□□□ -1.21
NEK9-205ENST00000555405 SPANXN1Q5VSR9 72 aa7.5□□□□□ -1.21
NEK9-205ENST00000555405 NUP35Q8NFH5 326 aa7.5□□□□□ -1.21
NEK9-205ENST00000555405 BORCS7Q96B45 105 aa7.5□□□□□ -1.21
NEK9-205ENST00000555405 IMMP2LQ96T52 175 aa7.5□□□□□ -1.21
NEK9-205ENST00000555405 FBLL1A6NHQ2 334 aaKnown RBP7.5□□□□□ -1.21
NEK9-205ENST00000555405 DEFB135Q30KP9 77 aa7.5□□□□□ -1.21
NEK9-205ENST00000555405 ARMS2P0C7Q2 107 aa7.49□□□□□ -1.21
NEK9-205ENST00000555405 TWIST1Q15672 202 aa7.49□□□□□ -1.21
NEK9-205ENST00000555405 FER1L6-AS1Q8NA97 138 aa7.49□□□□□ -1.21
NEK9-205ENST00000555405 TSKUQ8WUA8 353 aa7.49□□□□□ -1.21
NEK9-205ENST00000555405 GTSF1Q8WW33 167 aa7.49□□□□□ -1.21
NEK9-205ENST00000555405 MSRB1Q9NZV6 116 aa7.49□□□□□ -1.21
NEK9-205ENST00000555405 TRAV2A0A0B4J234 112 aa7.49□□□□□ -1.21
NEK9-205ENST00000555405 CMC4P56277 68 aaPredicted RBP7.49□□□□□ -1.21
NEK9-205ENST00000555405 AMTNQ6UX39 209 aa7.49□□□□□ -1.21
NEK9-205ENST00000555405 MDFICQ9P1T7 246 aa7.49□□□□□ -1.21
NEK9-205ENST00000555405 A0A087WWC5 75 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 RBMY1A1P0DJD3 496 aaKnown RBP7.48□□□□□ -1.21
NEK9-205ENST00000555405 RBMY1CP0DJD4 496 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 IGHV4-30-4P0DP06 118 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 FOXA3P55318 350 aaPredicted RBP7.48□□□□□ -1.21
NEK9-205ENST00000555405 RIPPLY3P57055 190 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 RBMY1FQ15415 496 aaKnown RBP7.48□□□□□ -1.21
NEK9-205ENST00000555405 ARL6IP6Q8N6S5 226 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 OR2K2Q8NGT1 345 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 C19orf73Q9NVV2 129 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 PHLDA3Q9Y5J5 127 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 INSP01308 110 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 ASIPP42127 132 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 FABP9Q0Z7S8 132 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 Q8N1Y9 231 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 CSTL1Q9H114 145 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 NAT8BQ9UHF3 227 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 SNURFLB1AK76 121 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 TRPT1Q86TN4 253 aaKnown RBP7.48□□□□□ -1.21
NEK9-205ENST00000555405 OR10AG1Q8NH19 301 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 GSN-AS1Q9NRJ2 163 aa7.48□□□□□ -1.21
NEK9-205ENST00000555405 IGHV1OR15-1A0A075B7D0 117 aa7.47□□□□□ -1.21
NEK9-205ENST00000555405 FAM74A4Q5TZK3 123 aa7.47□□□□□ -1.21
NEK9-205ENST00000555405 BTF3L4Q96K17 158 aa7.47□□□□□ -1.21
NEK9-205ENST00000555405 LOC102724200A0A096LPH7 203 aaPredicted RBP7.47□□□□□ -1.21
NEK9-205ENST00000555405 CRXO43186 299 aaPredicted RBP7.47□□□□□ -1.21
NEK9-205ENST00000555405 AZU1P20160 251 aa7.47□□□□□ -1.21
NEK9-205ENST00000555405 NTF3P20783 257 aa7.47□□□□□ -1.21
NEK9-205ENST00000555405 FAM231DQ6ZW35 169 aa7.47□□□□□ -1.21
NEK9-205ENST00000555405 DEFB104AQ8WTQ1 72 aa7.47□□□□□ -1.21
NEK9-205ENST00000555405 LENEPQ9Y5L5 61 aa7.47□□□□□ -1.21
NEK9-205ENST00000555405 IGHV3-73A0A0B4J1V6 119 aa7.46□□□□□ -1.21
NEK9-205ENST00000555405 TRBV6-1A0A0K0K1D8 114 aa7.46□□□□□ -1.21
NEK9-205ENST00000555405 COLCA2A8K830 154 aa7.46□□□□□ -1.21
NEK9-205ENST00000555405 TRGC2P03986 189 aa7.46□□□□□ -1.21
NEK9-205ENST00000555405 RAB5AP20339 215 aa7.46□□□□□ -1.21
NEK9-205ENST00000555405 SMIM12Q96EX1 92 aa7.46□□□□□ -1.21
NEK9-205ENST00000555405 KLLNB2CW77 178 aa7.46□□□□□ -1.22
NEK9-205ENST00000555405 NDUFS6O75380 124 aaKnown RBP7.46□□□□□ -1.22
NEK9-205ENST00000555405 CRISP2P16562 243 aa7.46□□□□□ -1.22
NEK9-205ENST00000555405 FAM110AQ9BQ89 295 aa7.46□□□□□ -1.22
NEK9-205ENST00000555405 TRAPPC1Q9Y5R8 145 aa7.46□□□□□ -1.22
NEK9-205ENST00000555405 A0A1B0GUT8 65 aa7.46□□□□□ -1.22
NEK9-205ENST00000555405 TYMSP04818 313 aa7.46□□□□□ -1.22
NEK9-205ENST00000555405 JPT2Q9H910 190 aa7.46□□□□□ -1.22
NEK9-205ENST00000555405 F5H697 171 aa7.45□□□□□ -1.22
NEK9-205ENST00000555405 ZNF324O75467 553 aaPredicted RBP7.45□□□□□ -1.22
NEK9-205ENST00000555405 MGPP08493 103 aa7.45□□□□□ -1.22
NEK9-205ENST00000555405 GOLT1BQ9Y3E0 138 aa7.45□□□□□ -1.22
NEK9-205ENST00000555405 IGHV3-53P01767 116 aa7.45□□□□□ -1.22
NEK9-205ENST00000555405 RETNQ9HD89 108 aa7.45□□□□□ -1.22
NEK9-205ENST00000555405 A0A087WWL8 130 aa7.45□□□□□ -1.22
NEK9-205ENST00000555405 RPS20P60866 119 aaKnown RBP7.45□□□□□ -1.22
NEK9-205ENST00000555405 C1orf158Q8N1D5 194 aa7.45□□□□□ -1.22
NEK9-205ENST00000555405 SMIM27A0A1W2PRY6 76 aa7.44□□□□□ -1.22
NEK9-205ENST00000555405 CXorf65A6NEN9 183 aa7.44□□□□□ -1.22
NEK9-205ENST00000555405 RIGQ13278 110 aa7.44□□□□□ -1.22
NEK9-205ENST00000555405 RRN3P1Q2M238 152 aa7.44□□□□□ -1.22
NEK9-205ENST00000555405 DMRTA1Q5VZB9 504 aa7.44□□□□□ -1.22
NEK9-205ENST00000555405 KCNS1Q96KK3 526 aa7.44□□□□□ -1.22
NEK9-205ENST00000555405 TMEM242Q9NWH2 141 aa7.44□□□□□ -1.22
NEK9-205ENST00000555405 EVI2AP22794 236 aa7.44□□□□□ -1.22
NEK9-205ENST00000555405 C14orf178Q8N769 122 aaPredicted RBP7.44□□□□□ -1.22
NEK9-205ENST00000555405 RCHY1Q96PM5 261 aa7.44□□□□□ -1.22
NEK9-205ENST00000555405 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
NEK9-205ENST00000555405 LINC01559Q495D7 138 aa7.43□□□□□ -1.22
NEK9-205ENST00000555405 ZNF876PQ49A33 203 aa7.43□□□□□ -1.22
NEK9-205ENST00000555405 FAM19A4Q96LR4 140 aa7.43□□□□□ -1.22
NEK9-205ENST00000555405 TRGV1A0A0A0MS02 117 aa7.43□□□□□ -1.22
NEK9-205ENST00000555405 DEFB130BP0DP73 79 aa7.43□□□□□ -1.22
NEK9-205ENST00000555405 DEFB130AP0DP74 79 aa7.43□□□□□ -1.22
NEK9-205ENST00000555405 Q6AWC8 147 aa7.43□□□□□ -1.22
NEK9-205ENST00000555405 C1QTNF4Q9BXJ3 329 aa7.43□□□□□ -1.22
NEK9-205ENST00000555405 NOP10Q9NPE3 64 aaKnown RBP7.43□□□□□ -1.22
NEK9-205ENST00000555405 C1orf196B1AJZ1 125 aa7.43□□□□□ -1.22
NEK9-205ENST00000555405 SMKR1H3BMG3 65 aa7.43□□□□□ -1.22
NEK9-205ENST00000555405 HBBP68871 147 aa7.43□□□□□ -1.22
NEK9-205ENST00000555405 MRPL18Q9H0U6 180 aaKnown RBP7.43□□□□□ -1.22
NEK9-205ENST00000555405 IGHV3-16A0A0C4DH30 117 aa7.42□□□□□ -1.22
NEK9-205ENST00000555405 GIG44P09565 113 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms