RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 M0R2P5 195 aa8.16□□□□□ -1.1
VRK1-204ENST00000555351 CIDEAO60543 219 aa8.16□□□□□ -1.1
VRK1-204ENST00000555351 ORM1P02763 201 aa8.16□□□□□ -1.1
VRK1-204ENST00000555351 SAPCD1Q5SSQ6 148 aa8.16□□□□□ -1.1
VRK1-204ENST00000555351 CYB561D1Q8N8Q1 229 aa8.16□□□□□ -1.1
VRK1-204ENST00000555351 NKX6-2Q9C056 277 aaPredicted RBP8.16□□□□□ -1.1
VRK1-204ENST00000555351 SDF2L1Q9HCN8 221 aa8.16□□□□□ -1.1
VRK1-204ENST00000555351 PKD1P98161 4303 aa8.16□□□□□ -1.1
VRK1-204ENST00000555351 TRAV4A0A0B4J268 109 aa8.15□□□□□ -1.1
VRK1-204ENST00000555351 TRGV4A0A0C4DH28 118 aa8.15□□□□□ -1.1
VRK1-204ENST00000555351 GGTLC3B5MD39 225 aa8.15□□□□□ -1.1
VRK1-204ENST00000555351 K7EP13 123 aa8.15□□□□□ -1.1
VRK1-204ENST00000555351 SUMO1P63165 101 aaKnown RBP8.15□□□□□ -1.1
VRK1-204ENST00000555351 GNG5P63218 68 aa8.15□□□□□ -1.1
VRK1-204ENST00000555351 TMEM75Q8N9X5 138 aa8.15□□□□□ -1.1
VRK1-204ENST00000555351 PTH2Q96A98 100 aa8.15□□□□□ -1.1
VRK1-204ENST00000555351 PSG8Q9UQ74 426 aa8.15□□□□□ -1.1
VRK1-204ENST00000555351 G3V3Q6 166 aa8.14□□□□□ -1.11
VRK1-204ENST00000555351 SIVA1O15304 175 aa8.14□□□□□ -1.11
VRK1-204ENST00000555351 IGLV2-11P01706 119 aa8.14□□□□□ -1.11
VRK1-204ENST00000555351 IGHV3-53P01767 116 aa8.14□□□□□ -1.11
VRK1-204ENST00000555351 TYMSP04818 313 aa8.14□□□□□ -1.11
VRK1-204ENST00000555351 PFN1P07737 140 aaKnown RBP8.14□□□□□ -1.11
VRK1-204ENST00000555351 FLI1Q01543 452 aaPredicted RBP8.14□□□□□ -1.11
VRK1-204ENST00000555351 TNP2Q05952 138 aa8.14□□□□□ -1.11
VRK1-204ENST00000555351 ZFP69Q49AA0 526 aa8.14□□□□□ -1.11
VRK1-204ENST00000555351 SMUG1Q53HV7 270 aa8.14□□□□□ -1.11
VRK1-204ENST00000555351 NEGR1Q7Z3B1 354 aa8.14□□□□□ -1.11
VRK1-204ENST00000555351 SH2D6Q7Z4S9 175 aa8.14□□□□□ -1.11
VRK1-204ENST00000555351 NAGKQ9UJ70 344 aa8.14□□□□□ -1.11
VRK1-204ENST00000555351 C9JCJ5 164 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 F6UZH7 168 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 GNRH2O43555 120 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 PPT1P50897 306 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 ZNF345Q14585 488 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 ZNF726P1Q15940 193 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 PIK3CD-AS1Q5SR53 167 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 AKR1C8PQ5T2L2 129 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 LYPD5Q6UWN5 251 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 OR4C5Q8NGB2 326 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 ZNF479Q96JC4 524 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 C8orf49Q96NF6 230 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 TCEAL7Q9BRU2 100 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 KRTAP1-5Q9BYS1 174 aa8.13□□□□□ -1.11
VRK1-204ENST00000555351 GCGP01275 180 aa8.12□□□□□ -1.11
VRK1-204ENST00000555351 TIRAPP58753 221 aa8.12□□□□□ -1.11
VRK1-204ENST00000555351 LINC01559Q495D7 138 aa8.12□□□□□ -1.11
VRK1-204ENST00000555351 PCNPQ8WW12 178 aaKnown RBP8.12□□□□□ -1.11
VRK1-204ENST00000555351 HIST1H2BAQ96A08 127 aa8.12□□□□□ -1.11
VRK1-204ENST00000555351 TXNDC17Q9BRA2 123 aa8.12□□□□□ -1.11
VRK1-204ENST00000555351 CYTL1Q9NRR1 136 aa8.12□□□□□ -1.11
VRK1-204ENST00000555351 ARL2-SNX15V9GYD0 113 aa8.12□□□□□ -1.11
VRK1-204ENST00000555351 TRAV9-2A0A087WT02 112 aa8.11□□□□□ -1.11
VRK1-204ENST00000555351 K7EQD1 137 aa8.11□□□□□ -1.11
VRK1-204ENST00000555351 ARPC5O15511 151 aa8.11□□□□□ -1.11
VRK1-204ENST00000555351 NXPH4O95158 308 aa8.11□□□□□ -1.11
VRK1-204ENST00000555351 SRIP30626 198 aa8.11□□□□□ -1.11
VRK1-204ENST00000555351 ZNF80P51504 273 aaPredicted RBP8.11□□□□□ -1.11
VRK1-204ENST00000555351 COX8CQ7Z4L0 72 aa8.11□□□□□ -1.11
VRK1-204ENST00000555351 C9orf85Q96MD7 179 aa8.11□□□□□ -1.11
VRK1-204ENST00000555351 C11orf21Q9P2W6 132 aa8.11□□□□□ -1.11
VRK1-204ENST00000555351 PKHD1P08F94 4074 aa8.11□□□□□ -1.11
VRK1-204ENST00000555351 HERC2O95714 4834 aa8.1□□□□□ -1.11
VRK1-204ENST00000555351 FAM74A7A6NL05 159 aa8.1□□□□□ -1.11
VRK1-204ENST00000555351 HMSDA8MTL9 139 aa8.1□□□□□ -1.11
VRK1-204ENST00000555351 IFNA7P01567 189 aa8.1□□□□□ -1.11
VRK1-204ENST00000555351 SFTA3P0C7M3 94 aa8.1□□□□□ -1.11
VRK1-204ENST00000555351 GYPEP15421 78 aa8.1□□□□□ -1.11
VRK1-204ENST00000555351 GATA1P15976 413 aaPredicted RBP8.1□□□□□ -1.11
VRK1-204ENST00000555351 FHITP49789 147 aa8.1□□□□□ -1.11
VRK1-204ENST00000555351 ZNF876PQ49A33 203 aa8.1□□□□□ -1.11
VRK1-204ENST00000555351 PRNTQ86SH4 94 aa8.1□□□□□ -1.11
VRK1-204ENST00000555351 NFE4Q86UQ8 179 aa8.1□□□□□ -1.11
VRK1-204ENST00000555351 KCNRGQ8N5I3 272 aa8.1□□□□□ -1.11
VRK1-204ENST00000555351 STOML3Q8TAV4 291 aa8.1□□□□□ -1.11
VRK1-204ENST00000555351 SGK494Q96LW2 274 aa8.1□□□□□ -1.11
VRK1-204ENST00000555351 DNAH11Q96DT5 4516 aa8.09□□□□□ -1.11
VRK1-204ENST00000555351 TRBV6-4A0A1B0GX49 114 aa8.09□□□□□ -1.11
VRK1-204ENST00000555351 MAP1LC3B2A6NCE7 125 aa8.09□□□□□ -1.11
VRK1-204ENST00000555351 FABP5P3A8MUU1 101 aa8.09□□□□□ -1.11
VRK1-204ENST00000555351 UMAD1C9J7I0 102 aa8.09□□□□□ -1.11
VRK1-204ENST00000555351 PEX7O00628 323 aa8.09□□□□□ -1.11
VRK1-204ENST00000555351 RS1O15537 224 aa8.09□□□□□ -1.11
VRK1-204ENST00000555351 SEC11BP0C7V7 166 aa8.09□□□□□ -1.11
VRK1-204ENST00000555351 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
VRK1-204ENST00000555351 MAP1LC3BQ9GZQ8 125 aa8.09□□□□□ -1.11
VRK1-204ENST00000555351 ZFP30Q9Y2G7 519 aa8.09□□□□□ -1.11
VRK1-204ENST00000555351 KIAA1109Q2LD37 5005 aa8.08□□□□□ -1.12
VRK1-204ENST00000555351 A0A0D9SG52 128 aa8.08□□□□□ -1.12
VRK1-204ENST00000555351 TRBV6-1A0A0K0K1D8 114 aa8.08□□□□□ -1.12
VRK1-204ENST00000555351 CDK2AP2O75956 126 aa8.08□□□□□ -1.12
VRK1-204ENST00000555351 RNASE3P12724 160 aaKnown RBP8.08□□□□□ -1.12
VRK1-204ENST00000555351 LINC00315P59091 139 aa8.08□□□□□ -1.12
VRK1-204ENST00000555351 DNLZQ5SXM8 178 aa8.08□□□□□ -1.12
VRK1-204ENST00000555351 CFAP126Q5VTH2 177 aa8.08□□□□□ -1.12
VRK1-204ENST00000555351 Q6ZRN7 208 aaPredicted RBP8.08□□□□□ -1.12
VRK1-204ENST00000555351 Q86TA4 180 aa8.08□□□□□ -1.12
VRK1-204ENST00000555351 ZNF575Q86XF7 245 aa8.08□□□□□ -1.12
VRK1-204ENST00000555351 FMC1Q96HJ9 113 aa8.08□□□□□ -1.12
VRK1-204ENST00000555351 LY96Q9Y6Y9 160 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms