RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 LINC00614P0C842 121 aa10.88□□□□□ -0.67
IFT43-209ENST00000555305 PRR9Q5T870 116 aa10.88□□□□□ -0.67
IFT43-209ENST00000555305 NIT1Q86X76 327 aa10.88□□□□□ -0.67
IFT43-209ENST00000555305 OR4C46A6NHA9 309 aa10.87□□□□□ -0.67
IFT43-209ENST00000555305 CCL24O00175 119 aa10.87□□□□□ -0.67
IFT43-209ENST00000555305 FLNAP21333 2647 aaKnown RBP10.87□□□□□ -0.67
IFT43-209ENST00000555305 S100A4P26447 101 aaKnown RBP10.87□□□□□ -0.67
IFT43-209ENST00000555305 SPANXN1Q5VSR9 72 aa10.87□□□□□ -0.67
IFT43-209ENST00000555305 FAM159AQ6UWV7 190 aa10.87□□□□□ -0.67
IFT43-209ENST00000555305 SPAG8Q99932 426 aaPredicted RBP10.87□□□□□ -0.67
IFT43-209ENST00000555305 C7orf71A4D174 169 aa10.86□□□□□ -0.67
IFT43-209ENST00000555305 SCGB1D1O95968 90 aa10.86□□□□□ -0.67
IFT43-209ENST00000555305 CDKN1BP46527 198 aa10.86□□□□□ -0.67
IFT43-209ENST00000555305 ADAMTSL5Q6ZMM2 481 aa10.86□□□□□ -0.67
IFT43-209ENST00000555305 AMN1Q8IY45 258 aa10.86□□□□□ -0.67
IFT43-209ENST00000555305 RAX2Q96IS3 184 aa10.86□□□□□ -0.67
IFT43-209ENST00000555305 NAGKQ9UJ70 344 aa10.86□□□□□ -0.67
IFT43-209ENST00000555305 NBPF19A0A087WUL8 3843 aa10.86□□□□□ -0.67
IFT43-209ENST00000555305 M0R2Z0 102 aa10.85□□□□□ -0.67
IFT43-209ENST00000555305 CD28P10747 220 aa10.85□□□□□ -0.67
IFT43-209ENST00000555305 CKS2P33552 79 aa10.85□□□□□ -0.67
IFT43-209ENST00000555305 Q6ZWC4 215 aa10.85□□□□□ -0.67
IFT43-209ENST00000555305 PRELID3AQ96N28 172 aa10.85□□□□□ -0.67
IFT43-209ENST00000555305 RNF114Q9Y508 228 aa10.85□□□□□ -0.67
IFT43-209ENST00000555305 MXRA5Q9NR99 2828 aa10.85□□□□□ -0.67
IFT43-209ENST00000555305 D6R8Y8 96 aa10.85□□□□□ -0.67
IFT43-209ENST00000555305 DEFB114Q30KQ6 69 aa10.85□□□□□ -0.67
IFT43-209ENST00000555305 TDRG1Q3Y452 100 aa10.85□□□□□ -0.67
IFT43-209ENST00000555305 MRPL51Q4U2R6 128 aaKnown RBP10.85□□□□□ -0.67
IFT43-209ENST00000555305 TSTD3H0UI37 97 aa10.84□□□□□ -0.67
IFT43-209ENST00000555305 J3KRW8 73 aa10.84□□□□□ -0.67
IFT43-209ENST00000555305 TCF21O43680 179 aa10.84□□□□□ -0.67
IFT43-209ENST00000555305 CMC4P56277 68 aaPredicted RBP10.84□□□□□ -0.67
IFT43-209ENST00000555305 ANXA2RQ3ZCQ2 193 aa10.84□□□□□ -0.67
IFT43-209ENST00000555305 FA2HQ7L5A8 372 aa10.84□□□□□ -0.67
IFT43-209ENST00000555305 PRSS3P2Q8NHM4 247 aa10.84□□□□□ -0.67
IFT43-209ENST00000555305 CITED2Q99967 270 aaPredicted RBP10.84□□□□□ -0.67
IFT43-209ENST00000555305 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
IFT43-209ENST00000555305 AP5S1Q9NUS5 200 aa10.84□□□□□ -0.67
IFT43-209ENST00000555305 PHLDA3Q9Y5J5 127 aa10.84□□□□□ -0.67
IFT43-209ENST00000555305 H3BVH4 76 aa10.83□□□□□ -0.68
IFT43-209ENST00000555305 DEFB1P60022 68 aa10.83□□□□□ -0.68
IFT43-209ENST00000555305 TMEM61Q8N0U2 210 aa10.83□□□□□ -0.68
IFT43-209ENST00000555305 OR10AG1Q8NH19 301 aa10.83□□□□□ -0.68
IFT43-209ENST00000555305 MUC21A0A0G2JKD1 596 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 MUC21A0A140T8X8 626 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 A8MTW9 85 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 HLA-DRB4P13762 266 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 SSTP61278 116 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 PKIAP61925 76 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 MUC21Q5SSG8 566 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 DUX3Q96PT4 197 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 SMR3AQ99954 134 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 HLA-DRB4X5D2U9 266 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 PROK1P58294 105 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 MRAP2Q96G30 205 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 CLUHP3Q96NS8 147 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 HSPB8Q9UJY1 196 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 SELENOKQ9Y6D0 94 aa10.82□□□□□ -0.68
IFT43-209ENST00000555305 CD33P20138 364 aa10.81□□□□□ -0.68
IFT43-209ENST00000555305 KRTDAPP60985 99 aa10.81□□□□□ -0.68
IFT43-209ENST00000555305 FAM19A2Q8N3H0 131 aa10.81□□□□□ -0.68
IFT43-209ENST00000555305 OR2K2Q8NGT1 345 aa10.81□□□□□ -0.68
IFT43-209ENST00000555305 RNF185Q96GF1 192 aa10.81□□□□□ -0.68
IFT43-209ENST00000555305 MAP1LC3AQ9H492 121 aa10.81□□□□□ -0.68
IFT43-209ENST00000555305 MSRB1Q9NZV6 116 aa10.81□□□□□ -0.68
IFT43-209ENST00000555305 A0A1W2PRX2 142 aa10.8□□□□□ -0.68
IFT43-209ENST00000555305 NXPH4O95158 308 aa10.8□□□□□ -0.68
IFT43-209ENST00000555305 DEFB131AP59861 70 aa10.8□□□□□ -0.68
IFT43-209ENST00000555305 URB1-AS1Q96HZ7 61 aa10.8□□□□□ -0.68
IFT43-209ENST00000555305 NXT2Q9NPJ8 142 aaKnown RBP10.8□□□□□ -0.68
IFT43-209ENST00000555305 GCN1Q92616 2671 aaKnown RBP10.8□□□□□ -0.68
IFT43-209ENST00000555305 TRAV12-3A0A0B4J271 114 aa10.8□□□□□ -0.68
IFT43-209ENST00000555305 IGHV1-24A0A0C4DH33 117 aa10.8□□□□□ -0.68
IFT43-209ENST00000555305 LEPROTL1O95214 131 aa10.8□□□□□ -0.68
IFT43-209ENST00000555305 PPP1R17O96001 155 aa10.8□□□□□ -0.68
IFT43-209ENST00000555305 BTF3P20290 206 aaKnown RBP10.8□□□□□ -0.68
IFT43-209ENST00000555305 CD300EQ496F6 205 aaPredicted RBP10.8□□□□□ -0.68
IFT43-209ENST00000555305 AMTNQ6UX39 209 aa10.8□□□□□ -0.68
IFT43-209ENST00000555305 NDUFA11Q86Y39 141 aa10.8□□□□□ -0.68
IFT43-209ENST00000555305 DEFB125Q8N687 156 aa10.8□□□□□ -0.68
IFT43-209ENST00000555305 AP1S3Q96PC3 154 aa10.8□□□□□ -0.68
IFT43-209ENST00000555305 DPH3P1Q9H4G8 78 aa10.8□□□□□ -0.68
IFT43-209ENST00000555305 ITPR2Q14571 2701 aa10.79□□□□□ -0.68
IFT43-209ENST00000555305 ZNF469Q96JG9 3925 aaPredicted RBP10.79□□□□□ -0.68
IFT43-209ENST00000555305 TRGV11A0A075B6L2 103 aa10.79□□□□□ -0.68
IFT43-209ENST00000555305 H3BMM0 161 aa10.79□□□□□ -0.68
IFT43-209ENST00000555305 EVI2AP22794 236 aa10.79□□□□□ -0.68
IFT43-209ENST00000555305 PMCHL1Q16048 86 aa10.79□□□□□ -0.68
IFT43-209ENST00000555305 C11orf44Q8N8P7 122 aa10.79□□□□□ -0.68
IFT43-209ENST00000555305 PRSS47A8MTI9 375 aa10.78□□□□□ -0.68
IFT43-209ENST00000555305 RNASE3P12724 160 aaKnown RBP10.78□□□□□ -0.68
IFT43-209ENST00000555305 PRR31Q5SQ13 230 aa10.78□□□□□ -0.68
IFT43-209ENST00000555305 Q6ZQT7 251 aa10.78□□□□□ -0.68
IFT43-209ENST00000555305 SYT8Q8NBV8 401 aa10.78□□□□□ -0.68
IFT43-209ENST00000555305 C20orf144Q9BQM9 153 aa10.78□□□□□ -0.68
IFT43-209ENST00000555305 MAP6D1Q9H9H5 199 aa10.78□□□□□ -0.68
IFT43-209ENST00000555305 ZNF256Q9Y2P7 627 aaPredicted RBP10.78□□□□□ -0.68
IFT43-209ENST00000555305 TLN2Q9Y4G6 2542 aa10.78□□□□□ -0.68
IFT43-209ENST00000555305 IGHV1OR15-1A0A075B7D0 117 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms