RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 FOXE3Q13461 319 aa9.5□□□□□ -0.89
ARHGEF40-206ENST00000555232 THAP8Q8NA92 274 aa9.5□□□□□ -0.89
ARHGEF40-206ENST00000555232 ZNF414Q96IQ9 312 aa9.5□□□□□ -0.89
ARHGEF40-206ENST00000555232 PF4P02776 101 aa9.5□□□□□ -0.89
ARHGEF40-206ENST00000555232 TMEM160Q9NX00 188 aa9.5□□□□□ -0.89
ARHGEF40-206ENST00000555232 OR10J3Q5JRS4 329 aa9.5□□□□□ -0.89
ARHGEF40-206ENST00000555232 TMEM70Q9BUB7 260 aa9.5□□□□□ -0.89
ARHGEF40-206ENST00000555232 GP9P14770 177 aa9.5□□□□□ -0.89
ARHGEF40-206ENST00000555232 NEGR1Q7Z3B1 354 aa9.5□□□□□ -0.89
ARHGEF40-206ENST00000555232 OR10AG1Q8NH19 301 aa9.5□□□□□ -0.89
ARHGEF40-206ENST00000555232 CELSR2Q9HCU4 2923 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 A0A1B0GV72 72 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 H3BRN7 92 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 IGHV3-53P01767 116 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 SLC25A16P16260 332 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 SRSF9Q13242 221 aaKnown RBP eCLIP9.49□□□□□ -0.892e-6■□□□□ 8.7
ARHGEF40-206ENST00000555232 OR11H1Q8NG94 326 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 GATA1P15976 413 aaPredicted RBP9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 GCSHP23434 173 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 DEFB131AP59861 70 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 TMEM8BA6NDV4 472 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 DEFB125Q8N687 156 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 C5orf56Q8N8D9 126 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 LY6G5BQ8NDX9 201 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 C18orf32Q8TCD1 76 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 AJUBAQ96IF1 538 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 MAP1LC3AQ9H492 121 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 LINC00574Q9H8X3 128 aa9.49□□□□□ -0.89
ARHGEF40-206ENST00000555232 H7C2G1 150 aa9.48□□□□□ -0.89
ARHGEF40-206ENST00000555232 SCGB1C2P0DMR2 95 aa9.48□□□□□ -0.89
ARHGEF40-206ENST00000555232 RPL35AP18077 110 aaKnown RBP9.48□□□□□ -0.89
ARHGEF40-206ENST00000555232 AZU1P20160 251 aa9.48□□□□□ -0.89
ARHGEF40-206ENST00000555232 LINC00173Q6ZV60 143 aa9.48□□□□□ -0.89
ARHGEF40-206ENST00000555232 TRBV7-1A0A0A6YYK4 115 aa9.48□□□□□ -0.89
ARHGEF40-206ENST00000555232 FNDC10F2Z333 226 aa9.48□□□□□ -0.89
ARHGEF40-206ENST00000555232 LINC01587Q99440 93 aa9.48□□□□□ -0.89
ARHGEF40-206ENST00000555232 IFI27P40305 119 aaPredicted RBP9.48□□□□□ -0.89
ARHGEF40-206ENST00000555232 ORMDL3Q8N138 153 aa9.48□□□□□ -0.89
ARHGEF40-206ENST00000555232 PRR25Q96S07 402 aa9.48□□□□□ -0.89
ARHGEF40-206ENST00000555232 IGKV3D-20A0A0C4DH25 116 aa9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 SLURP1P55000 103 aa9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 SFTA2Q6UW10 78 aa9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 TTC9CQ8N5M4 171 aa9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 DAZ1Q9NQZ3 744 aaKnown RBP9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 NF1P21359 2839 aa9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 ASIPP42127 132 aa9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 DEFB113Q30KQ7 82 aa9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 SPATA12Q7Z6I5 190 aa9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 AGPAT4-IT1Q9H0P7 198 aa9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 NBEAL1Q6ZS30 2694 aa9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 TRBV9A0A0B4J1U6 114 aa9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 EGR2P11161 476 aaPredicted RBP9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 PRSS57Q6UWY2 283 aa9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 XCL2Q9UBD3 114 aa9.47□□□□□ -0.89
ARHGEF40-206ENST00000555232 IGF1P05019 195 aa9.46□□□□□ -0.89
ARHGEF40-206ENST00000555232 SLC50A1Q9BRV3 221 aa9.46□□□□□ -0.89
ARHGEF40-206ENST00000555232 SETXQ7Z333 2677 aaKnown RBP9.46□□□□□ -0.89
ARHGEF40-206ENST00000555232 KIR3DS1Q14943 382 aa9.46□□□□□ -0.9
ARHGEF40-206ENST00000555232 C8orf31Q8N9H6 132 aa9.46□□□□□ -0.9
ARHGEF40-206ENST00000555232 ZNF418Q8TF45 676 aaPredicted RBP9.46□□□□□ -0.9
ARHGEF40-206ENST00000555232 EDN2P20800 178 aa9.46□□□□□ -0.9
ARHGEF40-206ENST00000555232 TCTEX1D4Q5JR98 221 aa9.46□□□□□ -0.9
ARHGEF40-206ENST00000555232 SMR3AQ99954 134 aa9.46□□□□□ -0.9
ARHGEF40-206ENST00000555232 TNFRSF13BO14836 293 aaPredicted RBP9.45□□□□□ -0.9
ARHGEF40-206ENST00000555232 GNRH2O43555 120 aa9.45□□□□□ -0.9
ARHGEF40-206ENST00000555232 LEPP41159 167 aa9.45□□□□□ -0.9
ARHGEF40-206ENST00000555232 CACNG7P62955 275 aa9.45□□□□□ -0.9
ARHGEF40-206ENST00000555232 TMEM97Q5BJF2 176 aa9.45□□□□□ -0.9
ARHGEF40-206ENST00000555232 NPBQ8NG41 125 aa9.45□□□□□ -0.9
ARHGEF40-206ENST00000555232 CELSR1Q9NYQ6 3014 aa9.45□□□□□ -0.9
ARHGEF40-206ENST00000555232 G3V4G9 280 aa9.45□□□□□ -0.9
ARHGEF40-206ENST00000555232 CD5LO43866 347 aa9.45□□□□□ -0.9
ARHGEF40-206ENST00000555232 Q6ZQT7 251 aa9.45□□□□□ -0.9
ARHGEF40-206ENST00000555232 C11orf52Q96A22 123 aa9.45□□□□□ -0.9
ARHGEF40-206ENST00000555232 FOXC2Q99958 501 aa9.45□□□□□ -0.9
ARHGEF40-206ENST00000555232 HTN3P15516 51 aa9.45□□□□□ -0.9
ARHGEF40-206ENST00000555232 IGHV3-64A0A075B6Q5 118 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 IGHV3-16A0A0C4DH30 117 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 TMEM238LA0A1B0GVL6 79 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 ODF3BA8MYP8 253 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 DSCR9P59020 149 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 OR2K2Q8NGT1 345 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 CCDC140Q96MF4 163 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 MRPL27Q9P0M9 148 aaKnown RBP9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 TRAV26-1A0A087WT03 109 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 LY6LH3BQJ8 138 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 NDUFA3O95167 84 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 PRSS2P07478 247 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 CKS1BP61024 79 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 CFHR3Q02985 330 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 APRG1Q8IVJ8 170 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 GTSF1Q8WW33 167 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 SPCS1Q9Y6A9 102 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 SIGMAR1Q99720 223 aa9.44□□□□□ -0.9
ARHGEF40-206ENST00000555232 BUB3O43684 328 aa9.43□□□□□ -0.9
ARHGEF40-206ENST00000555232 TRAV9-1A0A075B6T8 112 aa9.43□□□□□ -0.9
ARHGEF40-206ENST00000555232 ST20Q9HBF5 79 aa9.43□□□□□ -0.9
ARHGEF40-206ENST00000555232 JMJD8Q96S16 334 aa9.43□□□□□ -0.9
ARHGEF40-206ENST00000555232 MTURNQ8N3F0 131 aa9.42□□□□□ -0.9
ARHGEF40-206ENST00000555232 HOXD3P31249 432 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms