RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 C16orf92Q96LL3 132 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 A0A1B0GUS0 222 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 K7EQG2 157 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 HINT1P49773 126 aaPredicted RBP6.68□□□□□ -1.34
TDP1-210ENST00000554976 PET117Q6UWS5 81 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 CNFNQ9BYD5 112 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 GAGE12BA1L429 117 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 ADARB2-AS1A8MUL3 147 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 LINC01619G3V211 115 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 OVOL1O14753 267 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 SYNJ2BPP57105 145 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 DEFB136Q30KP8 78 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 Q6ZQT7 251 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 Q8N976 141 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 LINC01006Q8NI28 216 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 MS4A6AQ9H2W1 248 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 IGKV3D-20A0A0C4DH25 116 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 TRBV7-9A0A0J9YWB2 115 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 F2Z2F3 143 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 CRISP2P16562 243 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 DEFB1P60022 68 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 HIST2H2BDQ6DRA6 164 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 ZNF493Q6ZR52 646 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 PGLYRP4Q96LB8 373 aa6.67□□□□□ -1.34
TDP1-210ENST00000554976 CSN3P07498 182 aa6.66□□□□□ -1.34
TDP1-210ENST00000554976 HBBP68871 147 aa6.66□□□□□ -1.34
TDP1-210ENST00000554976 DAZAP1Q96EP5 407 aaKnown RBP6.66□□□□□ -1.34
TDP1-210ENST00000554976 A8MTW9 85 aa6.66□□□□□ -1.34
TDP1-210ENST00000554976 CD33P20138 364 aa6.66□□□□□ -1.34
TDP1-210ENST00000554976 OR10J3Q5JRS4 329 aa6.66□□□□□ -1.34
TDP1-210ENST00000554976 Q6AWC8 147 aa6.66□□□□□ -1.34
TDP1-210ENST00000554976 RAX2Q96IS3 184 aa6.66□□□□□ -1.34
TDP1-210ENST00000554976 ZNF479Q96JC4 524 aa6.66□□□□□ -1.34
TDP1-210ENST00000554976 LINC00477Q96M19 166 aa6.66□□□□□ -1.34
TDP1-210ENST00000554976 ARMS2P0C7Q2 107 aa6.66□□□□□ -1.34
TDP1-210ENST00000554976 CD28P10747 220 aa6.66□□□□□ -1.34
TDP1-210ENST00000554976 HIST1H1AQ02539 215 aaPredicted RBP6.66□□□□□ -1.34
TDP1-210ENST00000554976 OR11H1Q8NG94 326 aa6.66□□□□□ -1.34
TDP1-210ENST00000554976 OR8A1Q8NGG7 326 aa6.66□□□□□ -1.34
TDP1-210ENST00000554976 LOC102724200A0A096LPH7 203 aaPredicted RBP6.65□□□□□ -1.34
TDP1-210ENST00000554976 TMEM189A5PLL7 270 aa6.65□□□□□ -1.34
TDP1-210ENST00000554976 TAX1BP3O14907 124 aa6.65□□□□□ -1.34
TDP1-210ENST00000554976 SRD5A1P18405 259 aa6.65□□□□□ -1.34
TDP1-210ENST00000554976 KRTAP10-3P60369 221 aa6.65□□□□□ -1.34
TDP1-210ENST00000554976 OR1N2Q8NGR9 330 aa6.65□□□□□ -1.34
TDP1-210ENST00000554976 DLX4Q92988 240 aaPredicted RBP6.65□□□□□ -1.34
TDP1-210ENST00000554976 SELENOKQ9Y6D0 94 aa6.65□□□□□ -1.34
TDP1-210ENST00000554976 TRAV2A0A0B4J234 112 aa6.65□□□□□ -1.35
TDP1-210ENST00000554976 GRIFINA4D1Z8 144 aa6.65□□□□□ -1.35
TDP1-210ENST00000554976 FABP5P3A8MUU1 101 aa6.65□□□□□ -1.35
TDP1-210ENST00000554976 KLLNB2CW77 178 aa6.65□□□□□ -1.35
TDP1-210ENST00000554976 F6UB75 175 aa6.65□□□□□ -1.35
TDP1-210ENST00000554976 SAP30O75446 220 aa6.65□□□□□ -1.35
TDP1-210ENST00000554976 APCSP02743 223 aa6.65□□□□□ -1.35
TDP1-210ENST00000554976 TMEM78Q5T7P6 136 aa6.65□□□□□ -1.35
TDP1-210ENST00000554976 OR9G4Q8NGQ1 327 aa6.65□□□□□ -1.35
TDP1-210ENST00000554976 URB1-AS1Q96HZ7 61 aa6.65□□□□□ -1.35
TDP1-210ENST00000554976 SSBP4Q9BWG4 385 aaPredicted RBP6.65□□□□□ -1.35
TDP1-210ENST00000554976 PROK1P58294 105 aa6.64□□□□□ -1.35
TDP1-210ENST00000554976 FER1L6-AS1Q8NA97 138 aa6.64□□□□□ -1.35
TDP1-210ENST00000554976 ODF3Q96PU9 254 aa6.64□□□□□ -1.35
TDP1-210ENST00000554976 NDFIP1Q9BT67 221 aa6.64□□□□□ -1.35
TDP1-210ENST00000554976 U3KQK5 164 aa6.64□□□□□ -1.35
TDP1-210ENST00000554976 A0A1B0GW15 77 aa6.64□□□□□ -1.35
TDP1-210ENST00000554976 CRYBA4P53673 196 aa6.64□□□□□ -1.35
TDP1-210ENST00000554976 LYZL1Q6UWQ5 148 aa6.64□□□□□ -1.35
TDP1-210ENST00000554976 C18orf32Q8TCD1 76 aa6.64□□□□□ -1.35
TDP1-210ENST00000554976 RCHY1Q96PM5 261 aa6.64□□□□□ -1.35
TDP1-210ENST00000554976 CREBBPQ92793 2442 aa6.64□□□□□ -1.35
TDP1-210ENST00000554976 A0A1B0GUT8 65 aa6.63□□□□□ -1.35
TDP1-210ENST00000554976 J3KRW8 73 aa6.63□□□□□ -1.35
TDP1-210ENST00000554976 SNAI2O43623 268 aa6.63□□□□□ -1.35
TDP1-210ENST00000554976 KLHL30-AS1Q8NEE0 82 aa6.63□□□□□ -1.35
TDP1-210ENST00000554976 DUX3Q96PT4 197 aa6.63□□□□□ -1.35
TDP1-210ENST00000554976 IGHV4-4A0A075B6R2 117 aa6.63□□□□□ -1.35
TDP1-210ENST00000554976 A0A0J9YX75 114 aa6.63□□□□□ -1.35
TDP1-210ENST00000554976 KIAA1644Q3SXP7 199 aa6.63□□□□□ -1.35
TDP1-210ENST00000554976 SIGLEC8Q9NYZ4 499 aa6.63□□□□□ -1.35
TDP1-210ENST00000554976 TRAV26-1A0A087WT03 109 aa6.63□□□□□ -1.35
TDP1-210ENST00000554976 KIR3DS1Q14943 382 aa6.63□□□□□ -1.35
TDP1-210ENST00000554976 AMTNQ6UX39 209 aa6.63□□□□□ -1.35
TDP1-210ENST00000554976 DEFB125Q8N687 156 aa6.63□□□□□ -1.35
TDP1-210ENST00000554976 SERF1AO75920 110 aa6.62□□□□□ -1.35
TDP1-210ENST00000554976 SMIM17P0DL12 118 aa6.62□□□□□ -1.35
TDP1-210ENST00000554976 SRIP30626 198 aa6.62□□□□□ -1.35
TDP1-210ENST00000554976 PRR31Q5SQ13 230 aa6.62□□□□□ -1.35
TDP1-210ENST00000554976 AMMECR1LQ6DCA0 310 aa6.62□□□□□ -1.35
TDP1-210ENST00000554976 OR10J6PQ8NGY7 276 aa6.62□□□□□ -1.35
TDP1-210ENST00000554976 ZNF418Q8TF45 676 aaPredicted RBP6.62□□□□□ -1.35
TDP1-210ENST00000554976 CITED2Q99967 270 aaPredicted RBP6.62□□□□□ -1.35
TDP1-210ENST00000554976 ID1P41134 155 aa6.62□□□□□ -1.35
TDP1-210ENST00000554976 SCRT2Q9NQ03 307 aa6.62□□□□□ -1.35
TDP1-210ENST00000554976 TSSC4Q9Y5U2 329 aaPredicted RBP6.62□□□□□ -1.35
TDP1-210ENST00000554976 FASNP49327 2511 aaKnown RBP6.62□□□□□ -1.35
TDP1-210ENST00000554976 CAMPP49913 170 aa6.61□□□□□ -1.35
TDP1-210ENST00000554976 DEFB114Q30KQ6 69 aa6.61□□□□□ -1.35
TDP1-210ENST00000554976 RNF185Q96GF1 192 aa6.61□□□□□ -1.35
TDP1-210ENST00000554976 SAMD10Q9BYL1 202 aa6.61□□□□□ -1.35
TDP1-210ENST00000554976 PEMTQ9UBM1 199 aa6.61□□□□□ -1.35
TDP1-210ENST00000554976 ZNF256Q9Y2P7 627 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms