RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 ORM1P02763 201 aa12.98□□□□□ -0.33
PCNX1-209ENST00000554879 CHCHD1Q96BP2 118 aaKnown RBP12.98□□□□□ -0.33
PCNX1-209ENST00000554879 C9JCJ5 164 aa12.97□□□□□ -0.33
PCNX1-209ENST00000554879 K7EIM0 57 aa12.97□□□□□ -0.33
PCNX1-209ENST00000554879 SORL1Q92673 2214 aa12.97□□□□□ -0.33
PCNX1-209ENST00000554879 INSL3P51460 131 aa12.97□□□□□ -0.33
PCNX1-209ENST00000554879 CKS2P33552 79 aa12.97□□□□□ -0.33
PCNX1-209ENST00000554879 PATE2Q6UY27 113 aa12.97□□□□□ -0.33
PCNX1-209ENST00000554879 FAM110DQ8TAY7 271 aaPredicted RBP12.97□□□□□ -0.33
PCNX1-209ENST00000554879 SRD5A1P18405 259 aa12.96□□□□□ -0.33
PCNX1-209ENST00000554879 PAX8Q06710 450 aa12.96□□□□□ -0.33
PCNX1-209ENST00000554879 THAP8Q8NA92 274 aa12.96□□□□□ -0.33
PCNX1-209ENST00000554879 I3L2K1 104 aa12.96□□□□□ -0.34
PCNX1-209ENST00000554879 IGKV1-17P01599 117 aa12.96□□□□□ -0.34
PCNX1-209ENST00000554879 EVI2AP22794 236 aa12.96□□□□□ -0.34
PCNX1-209ENST00000554879 FAM106AQ4KMX7 169 aa12.96□□□□□ -0.34
PCNX1-209ENST00000554879 PRSS22Q9GZN4 317 aa12.96□□□□□ -0.34
PCNX1-209ENST00000554879 ZNF502Q8TBZ5 544 aa12.95□□□□□ -0.34
PCNX1-209ENST00000554879 KLK15Q9H2R5 256 aa12.95□□□□□ -0.34
PCNX1-209ENST00000554879 NDUFA3O95167 84 aa12.95□□□□□ -0.34
PCNX1-209ENST00000554879 MRPL23Q16540 153 aaKnown RBP12.95□□□□□ -0.34
PCNX1-209ENST00000554879 CHAC1Q9BUX1 264 aa12.95□□□□□ -0.34
PCNX1-209ENST00000554879 FOXC2Q99958 501 aa12.95□□□□□ -0.34
PCNX1-209ENST00000554879 FXYD2P54710 66 aa12.94□□□□□ -0.34
PCNX1-209ENST00000554879 MEIG1Q5JSS6 88 aa12.94□□□□□ -0.34
PCNX1-209ENST00000554879 LYRM7Q5U5X0 104 aa12.94□□□□□ -0.34
PCNX1-209ENST00000554879 NEGR1Q7Z3B1 354 aa12.94□□□□□ -0.34
PCNX1-209ENST00000554879 TCTEX1D4Q5JR98 221 aa12.94□□□□□ -0.34
PCNX1-209ENST00000554879 A0A1W2PRX2 142 aa12.93□□□□□ -0.34
PCNX1-209ENST00000554879 TACC2O95359 2948 aa12.93□□□□□ -0.34
PCNX1-209ENST00000554879 CHD6Q8TD26 2715 aa12.93□□□□□ -0.34
PCNX1-209ENST00000554879 CRYGBP07316 175 aa12.93□□□□□ -0.34
PCNX1-209ENST00000554879 C10orf126Q8N4M7 172 aa12.93□□□□□ -0.34
PCNX1-209ENST00000554879 GPR82Q96P67 336 aa12.93□□□□□ -0.34
PCNX1-209ENST00000554879 OTORQ9NRC9 128 aa12.93□□□□□ -0.34
PCNX1-209ENST00000554879 IFI27L1Q96BM0 104 aa12.93□□□□□ -0.34
PCNX1-209ENST00000554879 RPP21Q9H633 154 aaKnown RBP12.93□□□□□ -0.34
PCNX1-209ENST00000554879 ZNF491Q8N8L2 437 aa12.93□□□□□ -0.34
PCNX1-209ENST00000554879 C17orf77Q96MU5 243 aa12.93□□□□□ -0.34
PCNX1-209ENST00000554879 S100A4P26447 101 aaKnown RBP12.92□□□□□ -0.34
PCNX1-209ENST00000554879 PTH2Q96A98 100 aa12.92□□□□□ -0.34
PCNX1-209ENST00000554879 SHANK2-AS3Q9BTD1 123 aa12.92□□□□□ -0.34
PCNX1-209ENST00000554879 HELZ2Q9BYK8 2649 aaKnown RBP12.92□□□□□ -0.34
PCNX1-209ENST00000554879 IGKV1D-37A0A075B6S9 117 aa12.92□□□□□ -0.34
PCNX1-209ENST00000554879 TMEM78Q5T7P6 136 aa12.92□□□□□ -0.34
PCNX1-209ENST00000554879 PGPEP1Q9NXJ5 209 aa12.92□□□□□ -0.34
PCNX1-209ENST00000554879 Q71RC1 249 aaPredicted RBP12.92□□□□□ -0.34
PCNX1-209ENST00000554879 IGLV11-55A0A075B6I3 123 aa12.91□□□□□ -0.34
PCNX1-209ENST00000554879 IGKV3-20P01619 116 aa12.91□□□□□ -0.34
PCNX1-209ENST00000554879 RPL32P62910 135 aaKnown RBP12.91□□□□□ -0.34
PCNX1-209ENST00000554879 C5orf56Q8N8D9 126 aa12.91□□□□□ -0.34
PCNX1-209ENST00000554879 FANCD2OSQ96PS1 177 aa12.91□□□□□ -0.34
PCNX1-209ENST00000554879 IGKV2-40A0A087WW87 121 aaPredicted RBP12.91□□□□□ -0.34
PCNX1-209ENST00000554879 IGKV2D-40P01614 121 aaPredicted RBP12.91□□□□□ -0.34
PCNX1-209ENST00000554879 ITPR1Q14643 2758 aa12.91□□□□□ -0.34
PCNX1-209ENST00000554879 TCRAP04437 139 aa12.91□□□□□ -0.34
PCNX1-209ENST00000554879 IFI27P40305 119 aaPredicted RBP12.91□□□□□ -0.34
PCNX1-209ENST00000554879 RBPMS2Q6ZRY4 209 aaKnown RBP12.91□□□□□ -0.34
PCNX1-209ENST00000554879 CIARTQ8N365 385 aaPredicted RBP12.91□□□□□ -0.34
PCNX1-209ENST00000554879 FXYD5Q96DB9 178 aa12.91□□□□□ -0.34
PCNX1-209ENST00000554879 INS-IGF2F8WCM5 200 aa12.91□□□□□ -0.34
PCNX1-209ENST00000554879 HOXA3O43365 443 aaPredicted RBP12.91□□□□□ -0.34
PCNX1-209ENST00000554879 A8MWV9 139 aa12.9□□□□□ -0.34
PCNX1-209ENST00000554879 RPL13AP40429 203 aaKnown RBP12.9□□□□□ -0.34
PCNX1-209ENST00000554879 C1orf159Q96HA4 380 aa12.9□□□□□ -0.34
PCNX1-209ENST00000554879 TRBV7-1A0A0A6YYK4 115 aa12.9□□□□□ -0.34
PCNX1-209ENST00000554879 HTN1P15515 57 aa12.9□□□□□ -0.34
PCNX1-209ENST00000554879 A0A1B0GUT8 65 aa12.89□□□□□ -0.35
PCNX1-209ENST00000554879 TWIST1Q15672 202 aa12.89□□□□□ -0.35
PCNX1-209ENST00000554879 Q8TAT8 98 aa12.89□□□□□ -0.35
PCNX1-209ENST00000554879 MAP1LC3AQ9H492 121 aa12.89□□□□□ -0.35
PCNX1-209ENST00000554879 TSPAN13O95857 204 aa12.89□□□□□ -0.35
PCNX1-209ENST00000554879 WFDC11Q8NEX6 87 aa12.89□□□□□ -0.35
PCNX1-209ENST00000554879 AVPP01185 164 aa12.89□□□□□ -0.35
PCNX1-209ENST00000554879 FAM167A-AS1Q96KT0 104 aa12.89□□□□□ -0.35
PCNX1-209ENST00000554879 SPANXB1Q9NS25 103 aaPredicted RBP12.89□□□□□ -0.35
PCNX1-209ENST00000554879 FN1P02751 2386 aaKnown RBP12.88□□□□□ -0.35
PCNX1-209ENST00000554879 ZC2HC1BQ5TFG8 222 aa12.88□□□□□ -0.35
PCNX1-209ENST00000554879 FMC1Q96HJ9 113 aa12.88□□□□□ -0.35
PCNX1-209ENST00000554879 OR11H12B2RN74 326 aa12.88□□□□□ -0.35
PCNX1-209ENST00000554879 NCR2O95944 276 aa12.88□□□□□ -0.35
PCNX1-209ENST00000554879 OR11H1Q8NG94 326 aa12.88□□□□□ -0.35
PCNX1-209ENST00000554879 OR11H2Q8NH07 326 aa12.88□□□□□ -0.35
PCNX1-209ENST00000554879 MYOZ3Q8TDC0 251 aa12.88□□□□□ -0.35
PCNX1-209ENST00000554879 SMIM27A0A1W2PRY6 76 aa12.87□□□□□ -0.35
PCNX1-209ENST00000554879 TMEM262E9PQX1 116 aa12.87□□□□□ -0.35
PCNX1-209ENST00000554879 CRYGCP07315 174 aa12.87□□□□□ -0.35
PCNX1-209ENST00000554879 UFSP1Q6NVU6 142 aa12.87□□□□□ -0.35
PCNX1-209ENST00000554879 DYNLRB2Q8TF09 96 aa12.87□□□□□ -0.35
PCNX1-209ENST00000554879 J3QLI3 93 aa12.87□□□□□ -0.35
PCNX1-209ENST00000554879 CTSGP08311 255 aa12.87□□□□□ -0.35
PCNX1-209ENST00000554879 IFITM1P13164 125 aa12.87□□□□□ -0.35
PCNX1-209ENST00000554879 DLX4Q92988 240 aaPredicted RBP12.87□□□□□ -0.35
PCNX1-209ENST00000554879 ZNF256Q9Y2P7 627 aaPredicted RBP12.87□□□□□ -0.35
PCNX1-209ENST00000554879 RNF182Q8N6D2 247 aa12.87□□□□□ -0.35
PCNX1-209ENST00000554879 ZNF503Q96F45 646 aa12.87□□□□□ -0.35
PCNX1-209ENST00000554879 A6NJY4 79 aa12.86□□□□□ -0.35
PCNX1-209ENST00000554879 OR10J6PQ8NGY7 276 aa12.86□□□□□ -0.35
PCNX1-209ENST00000554879 DKK2Q9UBU2 259 aa12.86□□□□□ -0.35
PCNX1-209ENST00000554879 HBDP02042 147 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms