RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 IGKV3D-20A0A0C4DH25 116 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 K7ERJ3 54 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 M0R381 172 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 SIVA1O15304 175 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 ATP5G2Q06055 141 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 LINC01559Q495D7 138 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 SAMD5Q5TGI4 173 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 ADAMTSL5Q6ZMM2 481 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 Q8N6K4 173 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 Q8N8P6 123 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 CHAC1Q9BUX1 264 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 HRNRQ86YZ3 2850 aaPredicted RBP7.33□□□□□ -1.24
SYNE2-213ENST00000554805 ATP5LO75964 103 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 ADORA2A-AS1P86434 159 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 Q6ZQT7 251 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 MRPL35Q9NZE8 188 aaKnown RBP7.33□□□□□ -1.24
SYNE2-213ENST00000554805 C11orf21Q9P2W6 132 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 USP24Q9UPU5 2620 aa7.33□□□□□ -1.24
SYNE2-213ENST00000554805 EFNA4P52798 201 aa7.32□□□□□ -1.24
SYNE2-213ENST00000554805 FXYD2P54710 66 aa7.32□□□□□ -1.24
SYNE2-213ENST00000554805 C8orf86Q6ZUL3 223 aa7.32□□□□□ -1.24
SYNE2-213ENST00000554805 A0A1W2PPM0 123 aa7.32□□□□□ -1.24
SYNE2-213ENST00000554805 MGPP08493 103 aa7.32□□□□□ -1.24
SYNE2-213ENST00000554805 UCNP55089 124 aa7.32□□□□□ -1.24
SYNE2-213ENST00000554805 SCGB2A2Q13296 93 aa7.32□□□□□ -1.24
SYNE2-213ENST00000554805 LAGE3Q14657 143 aa7.32□□□□□ -1.24
SYNE2-213ENST00000554805 FBXL19-AS1Q494R0 122 aa7.32□□□□□ -1.24
SYNE2-213ENST00000554805 COX8CQ7Z4L0 72 aa7.32□□□□□ -1.24
SYNE2-213ENST00000554805 C1orf122Q6ZSJ8 110 aa7.32□□□□□ -1.24
SYNE2-213ENST00000554805 ZFAND3Q9H8U3 227 aa7.32□□□□□ -1.24
SYNE2-213ENST00000554805 CELSR2Q9HCU4 2923 aa7.31□□□□□ -1.24
SYNE2-213ENST00000554805 PAX8Q06710 450 aa7.31□□□□□ -1.24
SYNE2-213ENST00000554805 GNLYP22749 145 aa7.31□□□□□ -1.24
SYNE2-213ENST00000554805 EBI3Q14213 229 aa7.31□□□□□ -1.24
SYNE2-213ENST00000554805 CCDC140Q96MF4 163 aa7.31□□□□□ -1.24
SYNE2-213ENST00000554805 C2CD3Q4AC94 2353 aa7.31□□□□□ -1.24
SYNE2-213ENST00000554805 TRBV25-1A0A075B6N4 114 aa7.31□□□□□ -1.24
SYNE2-213ENST00000554805 UBE2E1P51965 193 aa7.31□□□□□ -1.24
SYNE2-213ENST00000554805 GLMPQ8WWB7 406 aa7.31□□□□□ -1.24
SYNE2-213ENST00000554805 HIST1H4GQ99525 98 aa7.31□□□□□ -1.24
SYNE2-213ENST00000554805 SIRPDQ9H106 197 aa7.31□□□□□ -1.24
SYNE2-213ENST00000554805 DEFB1P60022 68 aa7.3□□□□□ -1.24
SYNE2-213ENST00000554805 SRSF1Q07955 248 aaKnown RBP eCLIP7.3□□□□□ -1.24
SYNE2-213ENST00000554805 NPFFR1Q9GZQ6 430 aa7.3□□□□□ -1.24
SYNE2-213ENST00000554805 SMPXQ9UHP9 88 aa7.3□□□□□ -1.24
SYNE2-213ENST00000554805 RBAKDNA6NC62 111 aa7.3□□□□□ -1.24
SYNE2-213ENST00000554805 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-213ENST00000554805 CIDEAO60543 219 aa7.3□□□□□ -1.24
SYNE2-213ENST00000554805 IGHV3-11P01762 117 aa7.3□□□□□ -1.24
SYNE2-213ENST00000554805 SRSF2Q01130 221 aaKnown RBP7.3□□□□□ -1.24
SYNE2-213ENST00000554805 C11orf71Q6IPW1 123 aa7.3□□□□□ -1.24
SYNE2-213ENST00000554805 NAV2Q8IVL1 2488 aa7.3□□□□□ -1.24
SYNE2-213ENST00000554805 OR5A1Q8NGJ0 315 aa7.3□□□□□ -1.24
SYNE2-213ENST00000554805 DEFB104AQ8WTQ1 72 aa7.3□□□□□ -1.24
SYNE2-213ENST00000554805 SCGB3A1Q96QR1 104 aa7.3□□□□□ -1.24
SYNE2-213ENST00000554805 BPESC1Q9GZL8 116 aa7.3□□□□□ -1.24
SYNE2-213ENST00000554805 ZANQ9Y493 2812 aa7.3□□□□□ -1.24
SYNE2-213ENST00000554805 TRAV8-2A0A0B4J237 113 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 IGF1P05019 195 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 LY6EQ16553 131 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 PSMG4Q5JS54 123 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 UFSP1Q6NVU6 142 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 OR10J6PQ8NGY7 276 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 CNFNQ9BYD5 112 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 PHLDA3Q9Y5J5 127 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 ABCA2Q9BZC7 2435 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 CLPSL1A2RUU4 121 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 NPFFO15130 113 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 ARL3P36405 182 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 HHLA3Q9XRX5 114 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 TRBV7-1A0A0A6YYK4 115 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 TRAV41A0A0B4J266 112 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 ZNF575Q86XF7 245 aa7.29□□□□□ -1.24
SYNE2-213ENST00000554805 C14orf178Q8N769 122 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-213ENST00000554805 CENPVL3A0A0U1RRI6 287 aa7.28□□□□□ -1.24
SYNE2-213ENST00000554805 RNASE4P34096 147 aaKnown RBP7.28□□□□□ -1.24
SYNE2-213ENST00000554805 BRD3OSQ6XYD6 125 aa7.28□□□□□ -1.24
SYNE2-213ENST00000554805 OR11H12B2RN74 326 aa7.28□□□□□ -1.24
SYNE2-213ENST00000554805 MAPKAPK5-AS1Q8N8E1 139 aa7.28□□□□□ -1.24
SYNE2-213ENST00000554805 OR11H1Q8NG94 326 aa7.28□□□□□ -1.24
SYNE2-213ENST00000554805 OR11H2Q8NH07 326 aa7.28□□□□□ -1.24
SYNE2-213ENST00000554805 CHD6Q8TD26 2715 aa7.27□□□□□ -1.25
SYNE2-213ENST00000554805 A0A1W2PPR1 153 aa7.27□□□□□ -1.25
SYNE2-213ENST00000554805 ASIPP42127 132 aa7.27□□□□□ -1.25
SYNE2-213ENST00000554805 CEND1Q8N111 149 aa7.27□□□□□ -1.25
SYNE2-213ENST00000554805 A0A087WX48 190 aa7.27□□□□□ -1.25
SYNE2-213ENST00000554805 IGHV7-4-1A0A0J9YVY3 117 aa7.27□□□□□ -1.25
SYNE2-213ENST00000554805 PF4V1P10720 104 aa7.27□□□□□ -1.25
SYNE2-213ENST00000554805 NRACQ8N912 160 aa7.27□□□□□ -1.25
SYNE2-213ENST00000554805 WFDC12Q8WWY7 111 aa7.27□□□□□ -1.25
SYNE2-213ENST00000554805 SMIM2Q9BVW6 85 aa7.27□□□□□ -1.25
SYNE2-213ENST00000554805 CSTL1Q9H114 145 aa7.27□□□□□ -1.25
SYNE2-213ENST00000554805 HIGD1BQ9P298 99 aa7.27□□□□□ -1.25
SYNE2-213ENST00000554805 SRD5A1P18405 259 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 PRR9Q5T870 116 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 C9orf139Q6ZV77 190 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 RPL39LQ96EH5 51 aaKnown RBP7.26□□□□□ -1.25
SYNE2-213ENST00000554805 ZNF479Q96JC4 524 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 TRAV21A0A0B4J279 112 aa7.26□□□□□ -1.25
SYNE2-213ENST00000554805 F6UB75 175 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms