RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LINC00208Q96KT6 92 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 AIF1LQ9BQI0 150 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 NINQ8N4C6 2090 aa0.59□□□□□ -2.32
SCFD1-213ENST00000554776 HELZP42694 1942 aaKnown RBP0.59□□□□□ -2.32
SCFD1-213ENST00000554776 ARAP1Q96P48 1450 aa0.59□□□□□ -2.32
SCFD1-213ENST00000554776 BCORL1Q5H9F3 1711 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 TRAV17A0A0B4J275 112 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 A0A0D9SG42 100 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 NBDYA0A0U1RRE5 68 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 SCTP09683 121 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 KDELR1P24390 212 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 ZNF56Q15929 161 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 CCSMST1Q4G0I0 132 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 SPINK9Q5DT21 86 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 GLYATL3Q5SZD4 288 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 UNQ5815/PRO19632Q6UWF5 114 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 KRTAP19-3Q7Z4W3 81 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 SLC35B3Q9H1N7 401 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 C19orf12Q9NSK7 152 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 METTL1Q9UBP6 276 aaKnown RBP0.58□□□□□ -2.32
SCFD1-213ENST00000554776 DNAJC15Q9Y5T4 150 aa0.58□□□□□ -2.32
SCFD1-213ENST00000554776 SYNJ1O43426 1573 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 WDR97A6NE52 1622 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 A0A0G2JMM0 328 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 PNMA8CA0A1B0GUJ8 204 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 FXYD1O00168 92 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 ARPC5O15511 151 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 SMIM24O75264 130 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 EVI2AP22794 236 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 ZNF137PP52743 207 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 RHOHQ15669 191 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 TMEM91Q6ZNR0 172 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 OR4S1Q8NGB4 309 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 BATF3Q9NR55 127 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 KIDINS220Q9ULH0 1771 aa0.57□□□□□ -2.32
SCFD1-213ENST00000554776 ASH1LQ9NR48 2969 aaKnown RBP0.57□□□□□ -2.32
SCFD1-213ENST00000554776 LOC285556D6RIA3 1793 aa0.56□□□□□ -2.32
SCFD1-213ENST00000554776 IGF2P01344 180 aa0.56□□□□□ -2.32
SCFD1-213ENST00000554776 SCGB1A1P11684 91 aa0.56□□□□□ -2.32
SCFD1-213ENST00000554776 HLA-DRB4P13762 266 aa0.56□□□□□ -2.32
SCFD1-213ENST00000554776 POLR2JP52435 117 aaKnown RBP0.56□□□□□ -2.32
SCFD1-213ENST00000554776 CLLU1Q5K131 121 aa0.56□□□□□ -2.32
SCFD1-213ENST00000554776 C5orf56Q8N8D9 126 aa0.56□□□□□ -2.32
SCFD1-213ENST00000554776 MRPL35Q9NZE8 188 aaKnown RBP0.56□□□□□ -2.32
SCFD1-213ENST00000554776 GSKIPQ9P0R6 139 aa0.56□□□□□ -2.32
SCFD1-213ENST00000554776 HLA-DRB4X5D2U9 266 aa0.56□□□□□ -2.32
SCFD1-213ENST00000554776 ARHGEF10O15013 1369 aa0.56□□□□□ -2.32
SCFD1-213ENST00000554776 ATG2AQ2TAZ0 1938 aa0.56□□□□□ -2.32
SCFD1-213ENST00000554776 KNTC1P50748 2209 aa0.56□□□□□ -2.32
SCFD1-213ENST00000554776 PTPRGP23470 1445 aa0.55□□□□□ -2.32
SCFD1-213ENST00000554776 ZCCHC6Q5VYS8 1495 aaKnown RBP0.55□□□□□ -2.32
SCFD1-213ENST00000554776 CDK12Q9NYV4 1490 aaPredicted RBP0.55□□□□□ -2.32
SCFD1-213ENST00000554776 HIGD1CA8MV81 97 aa0.55□□□□□ -2.32
SCFD1-213ENST00000554776 M0R129 80 aa0.55□□□□□ -2.32
SCFD1-213ENST00000554776 AKR1D1P51857 326 aa0.55□□□□□ -2.32
SCFD1-213ENST00000554776 SNX29P2Q8IUI4 249 aa0.55□□□□□ -2.32
SCFD1-213ENST00000554776 DMAC1Q96GE9 116 aa0.55□□□□□ -2.32
SCFD1-213ENST00000554776 ATG5Q9H1Y0 275 aa0.55□□□□□ -2.32
SCFD1-213ENST00000554776 RREB1Q92766 1687 aa0.54□□□□□ -2.32
SCFD1-213ENST00000554776 BORCS7-ASMTA0A0B4J1R7 106 aa0.54□□□□□ -2.32
SCFD1-213ENST00000554776 LOC105371267A0A1B0GV96 52 aa0.54□□□□□ -2.32
SCFD1-213ENST00000554776 CCKP06307 115 aa0.54□□□□□ -2.32
SCFD1-213ENST00000554776 DBIP07108 87 aaKnown RBP0.54□□□□□ -2.32
SCFD1-213ENST00000554776 CKS1BP61024 79 aa0.54□□□□□ -2.32
SCFD1-213ENST00000554776 PLGLB1Q02325 96 aa0.54□□□□□ -2.32
SCFD1-213ENST00000554776 HIST1H1AQ02539 215 aaPredicted RBP0.54□□□□□ -2.32
SCFD1-213ENST00000554776 ASB16-AS1Q495Z4 193 aa0.54□□□□□ -2.32
SCFD1-213ENST00000554776 SPATA8Q6RVD6 105 aa0.54□□□□□ -2.32
SCFD1-213ENST00000554776 SLC25A26Q70HW3 274 aa0.54□□□□□ -2.32
SCFD1-213ENST00000554776 ATOH7Q8N100 152 aa0.54□□□□□ -2.32
SCFD1-213ENST00000554776 C10orf95Q9H7T3 257 aa0.54□□□□□ -2.32
SCFD1-213ENST00000554776 LSM2Q9Y333 95 aaKnown RBP0.54□□□□□ -2.32
SCFD1-213ENST00000554776 AFDNP55196 1824 aaKnown RBP0.54□□□□□ -2.32
SCFD1-213ENST00000554776 MORN2Q502X0 79 aa0.53□□□□□ -2.32
SCFD1-213ENST00000554776 LZICQ8WZA0 190 aa0.53□□□□□ -2.32
SCFD1-213ENST00000554776 FAM103A1Q9BTL3 118 aaKnown RBP0.53□□□□□ -2.32
SCFD1-213ENST00000554776 SMIM3Q9BZL3 60 aa0.53□□□□□ -2.32
SCFD1-213ENST00000554776 SPANXA1Q9NS26 97 aa0.53□□□□□ -2.32
SCFD1-213ENST00000554776 NOP16Q9Y3C1 178 aaKnown RBP0.53□□□□□ -2.32
SCFD1-213ENST00000554776 CPDO75976 1380 aa0.53□□□□□ -2.32
SCFD1-213ENST00000554776 TRBV10-1A0A0K0K1A3 114 aa0.52□□□□□ -2.33
SCFD1-213ENST00000554776 RBP4P02753 201 aa0.52□□□□□ -2.33
SCFD1-213ENST00000554776 DEFB132Q7Z7B7 95 aa0.52□□□□□ -2.33
SCFD1-213ENST00000554776 SPANXCQ9NY87 97 aa0.52□□□□□ -2.33
SCFD1-213ENST00000554776 CASZ1Q86V15 1759 aa0.52□□□□□ -2.33
SCFD1-213ENST00000554776 FAM236AA0A1B0GUQ0 79 aa0.51□□□□□ -2.33
SCFD1-213ENST00000554776 FAM236BA0A1B0GV22 79 aa0.51□□□□□ -2.33
SCFD1-213ENST00000554776 FXYD6P3P58550 94 aa0.51□□□□□ -2.33
SCFD1-213ENST00000554776 C10orf99Q6UWK7 81 aa0.51□□□□□ -2.33
SCFD1-213ENST00000554776 MAGOHBQ96A72 148 aaKnown RBP0.51□□□□□ -2.33
SCFD1-213ENST00000554776 TAS2R8Q9NYW2 309 aa0.51□□□□□ -2.33
SCFD1-213ENST00000554776 TENM3Q9P273 2699 aa0.51□□□□□ -2.33
SCFD1-213ENST00000554776 DLEC1Q9Y238 1755 aa0.51□□□□□ -2.33
SCFD1-213ENST00000554776 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
SCFD1-213ENST00000554776 AHNAKQ09666 5890 aaKnown RBP0.5□□□□□ -2.33
SCFD1-213ENST00000554776 CDK5RAP2Q96SN8 1893 aa0.5□□□□□ -2.33
SCFD1-213ENST00000554776 ERCC6Q03468 1493 aa0.5□□□□□ -2.33
SCFD1-213ENST00000554776 FRAS1Q86XX4 4008 aa0.5□□□□□ -2.33
SCFD1-213ENST00000554776 SLC25A6P12236 298 aa0.5□□□□□ -2.33
SCFD1-213ENST00000554776 NCS1P62166 190 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms