RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 OTOSQ8NHW6 89 aa-0.31□□□□□ -2.46
PCNX1-208ENST00000554707 TMEM141Q96I45 108 aa-0.31□□□□□ -2.46
PCNX1-208ENST00000554707 HIVEP3Q5T1R4 2406 aa-0.31□□□□□ -2.46
PCNX1-208ENST00000554707 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.31□□□□□ -2.46
PCNX1-208ENST00000554707 ANK1P16157 1881 aa-0.31□□□□□ -2.46
PCNX1-208ENST00000554707 TCOF1Q13428 1488 aaKnown RBP-0.32□□□□□ -2.46
PCNX1-208ENST00000554707 HBDP02042 147 aa-0.32□□□□□ -2.46
PCNX1-208ENST00000554707 SDC4P31431 198 aa-0.32□□□□□ -2.46
PCNX1-208ENST00000554707 SRP9P49458 86 aaKnown RBP-0.32□□□□□ -2.46
PCNX1-208ENST00000554707 PCBD1P61457 104 aa-0.32□□□□□ -2.46
PCNX1-208ENST00000554707 KRTAP6-1Q3LI64 71 aa-0.32□□□□□ -2.46
PCNX1-208ENST00000554707 CBLN4Q9NTU7 201 aa-0.32□□□□□ -2.46
PCNX1-208ENST00000554707 COA4Q9NYJ1 87 aa-0.32□□□□□ -2.46
PCNX1-208ENST00000554707 MED31Q9Y3C7 131 aa-0.32□□□□□ -2.46
PCNX1-208ENST00000554707 FAM135BQ49AJ0 1406 aa-0.32□□□□□ -2.46
PCNX1-208ENST00000554707 YTHDC2Q9H6S0 1430 aaKnown RBP-0.32□□□□□ -2.46
PCNX1-208ENST00000554707 EIF3AQ14152 1382 aaKnown RBP-0.32□□□□□ -2.46
PCNX1-208ENST00000554707 ANKRD31Q8N7Z5 1873 aa-0.33□□□□□ -2.46
PCNX1-208ENST00000554707 LOC107984640A0A0U1RRK4 108 aa-0.33□□□□□ -2.46
PCNX1-208ENST00000554707 A0A1W2PRE2 83 aa-0.33□□□□□ -2.46
PCNX1-208ENST00000554707 ADCYAP1P18509 176 aa-0.33□□□□□ -2.46
PCNX1-208ENST00000554707 Q5XG85 94 aa-0.33□□□□□ -2.46
PCNX1-208ENST00000554707 BOLA2Q9H3K6 86 aa-0.33□□□□□ -2.46
PCNX1-208ENST00000554707 ANK2Q01484 3957 aa-0.33□□□□□ -2.46
PCNX1-208ENST00000554707 CDK12Q9NYV4 1490 aaPredicted RBP-0.34□□□□□ -2.46
PCNX1-208ENST00000554707 APOC1P02654 83 aa-0.34□□□□□ -2.46
PCNX1-208ENST00000554707 TMEM78Q5T7P6 136 aa-0.34□□□□□ -2.46
PCNX1-208ENST00000554707 CACNA1CQ13936 2221 aa-0.34□□□□□ -2.46
PCNX1-208ENST00000554707 TRBV7-6A0A0J9YX20 115 aa-0.35□□□□□ -2.47
PCNX1-208ENST00000554707 TRBV10-1A0A0K0K1A3 114 aa-0.35□□□□□ -2.47
PCNX1-208ENST00000554707 E7EQ34 232 aa-0.35□□□□□ -2.47
PCNX1-208ENST00000554707 ZNF670-ZNF695F2Z2N8 137 aa-0.35□□□□□ -2.47
PCNX1-208ENST00000554707 IFNA21P01568 189 aa-0.35□□□□□ -2.47
PCNX1-208ENST00000554707 RPL7P18124 248 aaKnown RBP-0.35□□□□□ -2.47
PCNX1-208ENST00000554707 GNG10P50151 68 aa-0.35□□□□□ -2.47
PCNX1-208ENST00000554707 THEM6Q8WUY1 208 aa-0.35□□□□□ -2.47
PCNX1-208ENST00000554707 PCBD2Q9H0N5 130 aa-0.35□□□□□ -2.47
PCNX1-208ENST00000554707 BET1LQ9NYM9 111 aa-0.35□□□□□ -2.47
PCNX1-208ENST00000554707 POLQO75417 2590 aa-0.35□□□□□ -2.47
PCNX1-208ENST00000554707 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.35□□□□□ -2.47
PCNX1-208ENST00000554707 MCRIP1C9JLW8 97 aa-0.36□□□□□ -2.47
PCNX1-208ENST00000554707 FAM107AO95990 144 aa-0.36□□□□□ -2.47
PCNX1-208ENST00000554707 SLC25A5P05141 298 aaKnown RBP-0.36□□□□□ -2.47
PCNX1-208ENST00000554707 PYYP10082 97 aa-0.36□□□□□ -2.47
PCNX1-208ENST00000554707 ELOF1P60002 83 aaKnown RBP-0.36□□□□□ -2.47
PCNX1-208ENST00000554707 OR4S1Q8NGB4 309 aa-0.36□□□□□ -2.47
PCNX1-208ENST00000554707 PPP1R1CQ8WVI7 109 aa-0.36□□□□□ -2.47
PCNX1-208ENST00000554707 TRPM7Q96QT4 1865 aa-0.36□□□□□ -2.47
PCNX1-208ENST00000554707 BLMP54132 1417 aaPredicted RBP-0.37□□□□□ -2.47
PCNX1-208ENST00000554707 TEX49A0A1B0GTD5 131 aa-0.37□□□□□ -2.47
PCNX1-208ENST00000554707 NMBP08949 121 aa-0.37□□□□□ -2.47
PCNX1-208ENST00000554707 RPL22P35268 128 aaKnown RBP-0.37□□□□□ -2.47
PCNX1-208ENST00000554707 POLR2HP52434 150 aaKnown RBP-0.37□□□□□ -2.47
PCNX1-208ENST00000554707 PPP1R2P3Q6NXS1 205 aa-0.37□□□□□ -2.47
PCNX1-208ENST00000554707 BPESC1Q9GZL8 116 aa-0.37□□□□□ -2.47
PCNX1-208ENST00000554707 ATPIF1Q9UII2 106 aa-0.37□□□□□ -2.47
PCNX1-208ENST00000554707 JMJD1CQ15652 2540 aa-0.37□□□□□ -2.47
PCNX1-208ENST00000554707 UNC79Q9P2D8 2635 aa-0.37□□□□□ -2.47
PCNX1-208ENST00000554707 SOGA1O94964 1423 aa-0.38□□□□□ -2.47
PCNX1-208ENST00000554707 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.38□□□□□ -2.47
PCNX1-208ENST00000554707 AFDNP55196 1824 aaKnown RBP-0.38□□□□□ -2.47
PCNX1-208ENST00000554707 ASXL3Q9C0F0 2248 aa-0.38□□□□□ -2.47
PCNX1-208ENST00000554707 E5RI56 91 aa-0.38□□□□□ -2.47
PCNX1-208ENST00000554707 UQCRQO14949 82 aa-0.38□□□□□ -2.47
PCNX1-208ENST00000554707 OR2H2O95918 312 aa-0.38□□□□□ -2.47
PCNX1-208ENST00000554707 TCRAP04437 139 aa-0.38□□□□□ -2.47
PCNX1-208ENST00000554707 EMX2Q04743 252 aa-0.38□□□□□ -2.47
PCNX1-208ENST00000554707 NAT14Q8WUY8 206 aa-0.38□□□□□ -2.47
PCNX1-208ENST00000554707 A2MP01023 1474 aa-0.38□□□□□ -2.47
PCNX1-208ENST00000554707 ESPL1Q14674 2120 aa-0.38□□□□□ -2.47
PCNX1-208ENST00000554707 TANC1Q9C0D5 1861 aa-0.39□□□□□ -2.47
PCNX1-208ENST00000554707 RREB1Q92766 1687 aa-0.39□□□□□ -2.47
PCNX1-208ENST00000554707 SYNMO15061 1565 aa-0.39□□□□□ -2.47
PCNX1-208ENST00000554707 TRAV12-2A0A075B6T6 113 aa-0.39□□□□□ -2.47
PCNX1-208ENST00000554707 C10orf142B7Z368 130 aa-0.39□□□□□ -2.47
PCNX1-208ENST00000554707 PSPHP78330 225 aa-0.39□□□□□ -2.47
PCNX1-208ENST00000554707 MYH3P11055 1940 aa-0.4□□□□□ -2.47
PCNX1-208ENST00000554707 MAP2P11137 1827 aaKnown RBP-0.4□□□□□ -2.47
PCNX1-208ENST00000554707 UBR5O95071 2799 aaPredicted RBP-0.4□□□□□ -2.47
PCNX1-208ENST00000554707 PNMA8CA0A1B0GUJ8 204 aa-0.4□□□□□ -2.47
PCNX1-208ENST00000554707 TCRBV3S1A0A5B6 114 aa-0.4□□□□□ -2.47
PCNX1-208ENST00000554707 CFDP00746 253 aaPredicted RBP-0.4□□□□□ -2.47
PCNX1-208ENST00000554707 VPS25Q9BRG1 176 aa-0.4□□□□□ -2.47
PCNX1-208ENST00000554707 TANC2Q9HCD6 1990 aa-0.41□□□□□ -2.47
PCNX1-208ENST00000554707 CELSR2Q9HCU4 2923 aa-0.41□□□□□ -2.48
PCNX1-208ENST00000554707 GVQW2A0A096LPI5 108 aaPredicted RBP-0.41□□□□□ -2.48
PCNX1-208ENST00000554707 HIST1H1BP16401 226 aaKnown RBP-0.41□□□□□ -2.48
PCNX1-208ENST00000554707 AKR1D1P51857 326 aa-0.41□□□□□ -2.48
PCNX1-208ENST00000554707 SLC25A26Q70HW3 274 aa-0.41□□□□□ -2.48
PCNX1-208ENST00000554707 TMEM35BQ8NCS4 154 aa-0.41□□□□□ -2.48
PCNX1-208ENST00000554707 PPDPFLQ8WWR9 84 aa-0.41□□□□□ -2.48
PCNX1-208ENST00000554707 CCDC115Q96NT0 180 aa-0.41□□□□□ -2.48
PCNX1-208ENST00000554707 CALML5Q9NZT1 146 aa-0.41□□□□□ -2.48
PCNX1-208ENST00000554707 NUP210Q8TEM1 1887 aaPredicted RBP-0.41□□□□□ -2.48
PCNX1-208ENST00000554707 ROCK1Q13464 1354 aa-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 CXorf51AA0A1B0GTR3 108 aa-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 APODP05090 189 aa-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 COX4I1P13073 169 aa-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 PLGLB1Q02325 96 aa-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 HSD17B12Q53GQ0 312 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms