RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 GNRH2O43555 120 aa16.16■□□□□ 0.18
FOXA1-204ENST00000554607 UBE2L3P68036 154 aaKnown RBP16.16■□□□□ 0.18
FOXA1-204ENST00000554607 OR10J3Q5JRS4 329 aa16.16■□□□□ 0.18
FOXA1-204ENST00000554607 TRAV21A0A0B4J279 112 aa16.15■□□□□ 0.18
FOXA1-204ENST00000554607 ATP5SQ99766 215 aa16.15■□□□□ 0.18
FOXA1-204ENST00000554607 FBLL1A6NHQ2 334 aaKnown RBP16.14■□□□□ 0.17
FOXA1-204ENST00000554607 CIDEAO60543 219 aa16.14■□□□□ 0.17
FOXA1-204ENST00000554607 PRADC1Q9BSG0 188 aa16.14■□□□□ 0.17
FOXA1-204ENST00000554607 TM2D2Q9BX73 214 aa16.14■□□□□ 0.17
FOXA1-204ENST00000554607 TAS2R45P59539 299 aa16.13■□□□□ 0.17
FOXA1-204ENST00000554607 KHDC3LQ587J8 217 aa16.13■□□□□ 0.17
FOXA1-204ENST00000554607 CMTM2Q8TAZ6 248 aa16.13■□□□□ 0.17
FOXA1-204ENST00000554607 KCNS1Q96KK3 526 aa16.13■□□□□ 0.17
FOXA1-204ENST00000554607 HYLS1Q96M11 299 aa16.13■□□□□ 0.17
FOXA1-204ENST00000554607 SDF2L1Q9HCN8 221 aa16.13■□□□□ 0.17
FOXA1-204ENST00000554607 KRTAP29-1A8MX34 341 aaPredicted RBP16.12■□□□□ 0.17
FOXA1-204ENST00000554607 TYMSP04818 313 aa16.12■□□□□ 0.17
FOXA1-204ENST00000554607 LAGE3Q14657 143 aa16.12■□□□□ 0.17
FOXA1-204ENST00000554607 FAM74A1Q5RGS3 127 aa16.12■□□□□ 0.17
FOXA1-204ENST00000554607 LELP1Q5T871 98 aa16.12■□□□□ 0.17
FOXA1-204ENST00000554607 SLC25A29Q8N8R3 303 aa16.12■□□□□ 0.17
FOXA1-204ENST00000554607 OTORQ9NRC9 128 aa16.12■□□□□ 0.17
FOXA1-204ENST00000554607 IGHV3-30P01768 117 aa16.11■□□□□ 0.17
FOXA1-204ENST00000554607 IGHV3-33P01772 117 aa16.11■□□□□ 0.17
FOXA1-204ENST00000554607 IGHV3-30-3P0DP02 117 aa16.11■□□□□ 0.17
FOXA1-204ENST00000554607 IGHV3-30-5P0DP03 117 aa16.11■□□□□ 0.17
FOXA1-204ENST00000554607 RHOHQ15669 191 aa16.11■□□□□ 0.17
FOXA1-204ENST00000554607 DEFB104AQ8WTQ1 72 aa16.11■□□□□ 0.17
FOXA1-204ENST00000554607 FAM240BA0A1B0GVZ2 78 aa16.1■□□□□ 0.17
FOXA1-204ENST00000554607 TRBV6-4A0A1B0GX49 114 aa16.1■□□□□ 0.17
FOXA1-204ENST00000554607 PGPA6NDG6 321 aa16.1■□□□□ 0.17
FOXA1-204ENST00000554607 ARL6IP6Q8N6S5 226 aa16.1■□□□□ 0.17
FOXA1-204ENST00000554607 NMES1Q9C002 83 aa16.09■□□□□ 0.17
FOXA1-204ENST00000554607 TREM1Q9NP99 234 aa16.09■□□□□ 0.17
FOXA1-204ENST00000554607 ZNF876PQ49A33 203 aa16.08■□□□□ 0.16
FOXA1-204ENST00000554607 FFAR4Q5NUL3 377 aa16.08■□□□□ 0.16
FOXA1-204ENST00000554607 Q6ZSA8 131 aa16.08■□□□□ 0.16
FOXA1-204ENST00000554607 LINC00528Q8N1L1 170 aa16.08■□□□□ 0.16
FOXA1-204ENST00000554607 ASB13Q8WXK3 278 aa16.08■□□□□ 0.16
FOXA1-204ENST00000554607 GTSF1LQ9H1H1 148 aa16.08■□□□□ 0.16
FOXA1-204ENST00000554607 OR5AC2Q9NZP5 309 aa16.08■□□□□ 0.16
FOXA1-204ENST00000554607 RPH3ALQ9UNE2 315 aa16.08■□□□□ 0.16
FOXA1-204ENST00000554607 RS1O15537 224 aa16.07■□□□□ 0.16
FOXA1-204ENST00000554607 GOLT1AQ6ZVE7 132 aa16.07■□□□□ 0.16
FOXA1-204ENST00000554607 SH3BGRL3Q9H299 93 aa16.07■□□□□ 0.16
FOXA1-204ENST00000554607 MBD2Q9UBB5 411 aa16.07■□□□□ 0.16
FOXA1-204ENST00000554607 LRRC37A5PQ49AS3 106 aa16.06■□□□□ 0.16
FOXA1-204ENST00000554607 CFAP126Q5VTH2 177 aa16.06■□□□□ 0.16
FOXA1-204ENST00000554607 ATP6V0E2Q8NHE4 81 aa16.06■□□□□ 0.16
FOXA1-204ENST00000554607 CCDC32Q9BV29 185 aa16.06■□□□□ 0.16
FOXA1-204ENST00000554607 F6UZH7 168 aa16.05■□□□□ 0.16
FOXA1-204ENST00000554607 CYCSP99999 105 aaKnown RBP16.05■□□□□ 0.16
FOXA1-204ENST00000554607 MZT2BQ6NZ67 158 aa16.05■□□□□ 0.16
FOXA1-204ENST00000554607 TVP23CQ96ET8 276 aa16.05■□□□□ 0.16
FOXA1-204ENST00000554607 TRAV8-3A0A0A6YYJ7 113 aa16.04■□□□□ 0.16
FOXA1-204ENST00000554607 H0YIZ8 118 aa16.04■□□□□ 0.16
FOXA1-204ENST00000554607 SIX6O95475 246 aa16.04■□□□□ 0.16
FOXA1-204ENST00000554607 SCGB1C1Q8TD33 95 aa16.04■□□□□ 0.16
FOXA1-204ENST00000554607 MGST1P10620 155 aaKnown RBP16.03■□□□□ 0.16
FOXA1-204ENST00000554607 TOR2AQ5JU69 321 aa16.03■□□□□ 0.16
FOXA1-204ENST00000554607 SERTAD4-AS1Q5TG53 156 aa16.03■□□□□ 0.16
FOXA1-204ENST00000554607 PQLC2Q6ZP29 291 aa16.03■□□□□ 0.16
FOXA1-204ENST00000554607 NDFIP1Q9BT67 221 aa16.03■□□□□ 0.16
FOXA1-204ENST00000554607 IGHV3-73A0A0B4J1V6 119 aa16.02■□□□□ 0.16
FOXA1-204ENST00000554607 WFDC2Q14508 124 aa16.02■□□□□ 0.16
FOXA1-204ENST00000554607 PTH2Q96A98 100 aa16.02■□□□□ 0.16
FOXA1-204ENST00000554607 TRAV8-1A0A0A6YYK1 113 aa16.01■□□□□ 0.15
FOXA1-204ENST00000554607 DPPA3Q6W0C5 159 aa16.01■□□□□ 0.15
FOXA1-204ENST00000554607 A0A1W2PPV4 95 aa16■□□□□ 0.15
FOXA1-204ENST00000554607 TAAR5O14804 337 aa16■□□□□ 0.15
FOXA1-204ENST00000554607 SYT8Q8NBV8 401 aa16■□□□□ 0.15
FOXA1-204ENST00000554607 COX11Q9Y6N1 276 aa16■□□□□ 0.15
FOXA1-204ENST00000554607 SERTM2A0A1B0GWG4 89 aa15.99■□□□□ 0.15
FOXA1-204ENST00000554607 C9orf85Q96MD7 179 aa15.99■□□□□ 0.15
FOXA1-204ENST00000554607 HSPB11Q9Y547 144 aa15.99■□□□□ 0.15
FOXA1-204ENST00000554607 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.98■□□□□ 0.15
FOXA1-204ENST00000554607 LECT2O14960 151 aa15.98■□□□□ 0.15
FOXA1-204ENST00000554607 EIF3GO75821 320 aaKnown RBP eCLIP15.98■□□□□ 0.15
FOXA1-204ENST00000554607 ACOT6Q3I5F7 207 aaPredicted RBP15.98■□□□□ 0.15
FOXA1-204ENST00000554607 GGTLC3B5MD39 225 aa15.97■□□□□ 0.15
FOXA1-204ENST00000554607 GNG5P63218 68 aa15.97■□□□□ 0.15
FOXA1-204ENST00000554607 ASAH1Q13510 395 aa15.97■□□□□ 0.15
FOXA1-204ENST00000554607 ZNF506Q5JVG8 444 aa15.97■□□□□ 0.15
FOXA1-204ENST00000554607 PGPEP1LA6NFU8 196 aa15.96■□□□□ 0.15
FOXA1-204ENST00000554607 PPP1R1CQ8WVI7 109 aa15.96■□□□□ 0.15
FOXA1-204ENST00000554607 C11orf21Q9P2W6 132 aa15.96■□□□□ 0.15
FOXA1-204ENST00000554607 K7EQM0 130 aa15.95■□□□□ 0.14
FOXA1-204ENST00000554607 PET100P0DJ07 73 aa15.95■□□□□ 0.14
FOXA1-204ENST00000554607 ZNF80P51504 273 aaPredicted RBP15.95■□□□□ 0.14
FOXA1-204ENST00000554607 SCXQ7RTU7 201 aa15.95■□□□□ 0.14
FOXA1-204ENST00000554607 Q8N3U1 123 aa15.95■□□□□ 0.14
FOXA1-204ENST00000554607 RMI2Q96E14 147 aa15.95■□□□□ 0.14
FOXA1-204ENST00000554607 SGK494Q96LW2 274 aa15.95■□□□□ 0.14
FOXA1-204ENST00000554607 SMIM3Q9BZL3 60 aa15.95■□□□□ 0.14
FOXA1-204ENST00000554607 HMCN2Q8NDA2 5059 aa15.95■□□□□ 0.14
FOXA1-204ENST00000554607 A0A087WWC5 75 aa15.94■□□□□ 0.14
FOXA1-204ENST00000554607 RBFOX3A6NFN3 312 aa15.94■□□□□ 0.14
FOXA1-204ENST00000554607 GCGP01275 180 aa15.94■□□□□ 0.14
FOXA1-204ENST00000554607 RPL12P30050 165 aaKnown RBP15.94■□□□□ 0.14
FOXA1-204ENST00000554607 ZFP2Q6ZN57 461 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms