RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 NDFIP1Q9BT67 221 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 TREM1Q9NP99 234 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 EPDR1Q9UM22 224 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 EPPK1P58107 5090 aaKnown RBP5.23□□□□□ -1.57
LINC00640-201ENST00000554409 A0A0J9YY99 117 aa5.23□□□□□ -1.57
LINC00640-201ENST00000554409 F6UZH7 168 aa5.23□□□□□ -1.57
LINC00640-201ENST00000554409 SMLR1H3BR10 107 aa5.23□□□□□ -1.57
LINC00640-201ENST00000554409 IGLV2-11P01706 119 aa5.23□□□□□ -1.57
LINC00640-201ENST00000554409 SUMO1P63165 101 aaKnown RBP5.23□□□□□ -1.57
LINC00640-201ENST00000554409 CYB561D1Q8N8Q1 229 aa5.23□□□□□ -1.57
LINC00640-201ENST00000554409 RASL10AQ92737 203 aa5.23□□□□□ -1.57
LINC00640-201ENST00000554409 VSIG2Q96IQ7 327 aa5.23□□□□□ -1.57
LINC00640-201ENST00000554409 KCNS1Q96KK3 526 aa5.23□□□□□ -1.57
LINC00640-201ENST00000554409 NKX6-2Q9C056 277 aaPredicted RBP5.23□□□□□ -1.57
LINC00640-201ENST00000554409 MRPL16Q9NX20 251 aaKnown RBP5.23□□□□□ -1.57
LINC00640-201ENST00000554409 MDFICQ9P1T7 246 aa5.23□□□□□ -1.57
LINC00640-201ENST00000554409 LINC00588Q9Y4M8 146 aa5.23□□□□□ -1.57
LINC00640-201ENST00000554409 MUC4Q99102 2169 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 IGLV2-18A0A075B6J9 118 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 IGHV3-16A0A0C4DH30 117 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 A0A0D9SG52 128 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 M0R2N4 97 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 RTL8CO15255 209 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 TYMSP04818 313 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 FLI1Q01543 452 aaPredicted RBP5.22□□□□□ -1.57
LINC00640-201ENST00000554409 SLAQ13239 276 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 TMEM183BQ1AE95 376 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 IQCF2Q8IXL9 164 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 TMEM183AQ8IXX5 376 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 OR11H4Q8NGC9 324 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 UPK3BQ9BT76 320 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 SDF2L1Q9HCN8 221 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 PSG8Q9UQ74 426 aa5.22□□□□□ -1.57
LINC00640-201ENST00000554409 FRAS1Q86XX4 4008 aa5.21□□□□□ -1.57
LINC00640-201ENST00000554409 A0A096LPF7 62 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 NBDYA0A0U1RRE5 68 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 A0A1B0GVY2 172 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 MAP1LC3B2A6NCE7 125 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 FAM74A7A6NL05 159 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 UMAD1C9J7I0 102 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 M0R2P5 195 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 BCL2L11O43521 198 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 PFN1P07737 140 aaKnown RBP5.21□□□□□ -1.58
LINC00640-201ENST00000554409 SEC11BP0C7V7 166 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 FGF8P55075 233 aaPredicted RBP5.21□□□□□ -1.58
LINC00640-201ENST00000554409 FHL2Q14192 279 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 ZFP69Q49AA0 526 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 SMUG1Q53HV7 270 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 SOHLH1Q5JUK2 328 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 SAPCD1Q5SSQ6 148 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 HIST1H2BAQ96A08 127 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 SGK494Q96LW2 274 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 C8orf49Q96NF6 230 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 TCEAL7Q9BRU2 100 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 MAP1LC3BQ9GZQ8 125 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 PRO0255Q9UI72 69 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 NAGKQ9UJ70 344 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 MRPS16Q9Y3D3 137 aaKnown RBP5.21□□□□□ -1.58
LINC00640-201ENST00000554409 ICOSQ9Y6W8 199 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 ARL2-SNX15V9GYD0 113 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 DNAH10Q8IVF4 4471 aa5.21□□□□□ -1.58
LINC00640-201ENST00000554409 TRAV4A0A0B4J268 109 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 KANTRA0A1W2PQU2 76 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 PRSS29PA6NIE9 313 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 PEX7O00628 323 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 GNRH2O43555 120 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 FHITP49789 147 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 PPT1P50897 306 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 ZNF80P51504 273 aaPredicted RBP5.2□□□□□ -1.58
LINC00640-201ENST00000554409 CRYBA4P53673 196 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 UBE2G2P60604 165 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 EIF5AP63241 154 aaKnown RBP5.2□□□□□ -1.58
LINC00640-201ENST00000554409 ESRGQ1W209 222 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 C1orf134Q5TEV5 83 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 DPPA3Q6W0C5 159 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 PRNTQ86SH4 94 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 Q86TA4 180 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 STOML3Q8TAV4 291 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 MBD3L1Q8WWY6 194 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 C11orf21Q9P2W6 132 aa5.2□□□□□ -1.58
LINC00640-201ENST00000554409 TRGV4A0A0C4DH28 118 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 TRBV6-1A0A0K0K1D8 114 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 A0A1W2PPQ1 181 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 GCGP01275 180 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 IFNA7P01567 189 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 IGHV3-53P01767 116 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 MRPL23Q16540 153 aaKnown RBP5.19□□□□□ -1.58
LINC00640-201ENST00000554409 TTC32Q5I0X7 151 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 TMUB2Q71RG4 321 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 COX8CQ7Z4L0 72 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 PTH2Q96A98 100 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 ZNF479Q96JC4 524 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 LINC00479Q96M42 142 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 C9orf85Q96MD7 179 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 ZNF471Q9BX82 626 aaPredicted RBP5.19□□□□□ -1.58
LINC00640-201ENST00000554409 Q9H8V8 135 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 HHLA3Q9XRX5 114 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 ZFP30Q9Y2G7 519 aa5.19□□□□□ -1.58
LINC00640-201ENST00000554409 TRAV34A0A0B4J273 112 aa5.18□□□□□ -1.58
LINC00640-201ENST00000554409 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms