RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 WFDC1Q9HC57 220 aa12.75□□□□□ -0.37
CPSF2-203ENST00000554290 MSRB1Q9NZV6 116 aa12.75□□□□□ -0.37
CPSF2-203ENST00000554290 IGHV3-16A0A0C4DH30 117 aa12.74□□□□□ -0.37
CPSF2-203ENST00000554290 A6NHS1 94 aa12.74□□□□□ -0.37
CPSF2-203ENST00000554290 RAB2AP61019 212 aa12.74□□□□□ -0.37
CPSF2-203ENST00000554290 OR10G9Q8NGN4 311 aa12.74□□□□□ -0.37
CPSF2-203ENST00000554290 OR10G7Q8NGN6 311 aa12.74□□□□□ -0.37
CPSF2-203ENST00000554290 SDF2L1Q9HCN8 221 aa12.74□□□□□ -0.37
CPSF2-203ENST00000554290 DNAH10OSP0CZ25 163 aa12.73□□□□□ -0.37
CPSF2-203ENST00000554290 NDFIP1Q9BT67 221 aa12.73□□□□□ -0.37
CPSF2-203ENST00000554290 LRP1BQ9NZR2 4599 aa12.72□□□□□ -0.37
CPSF2-203ENST00000554290 A0A087WTM6 91 aa12.72□□□□□ -0.37
CPSF2-203ENST00000554290 TRAV8-1A0A0A6YYK1 113 aa12.72□□□□□ -0.37
CPSF2-203ENST00000554290 F6UZH7 168 aa12.72□□□□□ -0.37
CPSF2-203ENST00000554290 C10orf126Q8N4M7 172 aa12.72□□□□□ -0.37
CPSF2-203ENST00000554290 ASB13Q8WXK3 278 aa12.72□□□□□ -0.37
CPSF2-203ENST00000554290 TVP23CQ96ET8 276 aa12.72□□□□□ -0.37
CPSF2-203ENST00000554290 SERTM2A0A1B0GWG4 89 aa12.71□□□□□ -0.37
CPSF2-203ENST00000554290 HMGB3O15347 200 aaKnown RBP12.71□□□□□ -0.37
CPSF2-203ENST00000554290 TYMSP04818 313 aa12.71□□□□□ -0.37
CPSF2-203ENST00000554290 NHLRC2Q8NBF2 726 aa12.71□□□□□ -0.37
CPSF2-203ENST00000554290 EPM2AB3EWF7 344 aa12.7□□□□□ -0.38
CPSF2-203ENST00000554290 K7EQM0 130 aa12.7□□□□□ -0.38
CPSF2-203ENST00000554290 CRYGDP07320 174 aa12.7□□□□□ -0.38
CPSF2-203ENST00000554290 ARL14EPLP0DKL9 152 aa12.7□□□□□ -0.38
CPSF2-203ENST00000554290 FUSP35637 526 aaKnown RBP eCLIP12.7□□□□□ -0.38
CPSF2-203ENST00000554290 CDC34P49427 236 aaPredicted RBP12.7□□□□□ -0.38
CPSF2-203ENST00000554290 TIRAPP58753 221 aa12.7□□□□□ -0.38
CPSF2-203ENST00000554290 GNG5P63218 68 aa12.7□□□□□ -0.38
CPSF2-203ENST00000554290 LOC100131303A0A0U1RQF7 123 aa12.69□□□□□ -0.38
CPSF2-203ENST00000554290 FBLL1A6NHQ2 334 aaKnown RBP12.69□□□□□ -0.38
CPSF2-203ENST00000554290 CIDEAO60543 219 aa12.69□□□□□ -0.38
CPSF2-203ENST00000554290 GATA1P15976 413 aaPredicted RBP12.69□□□□□ -0.38
CPSF2-203ENST00000554290 PPT1P50897 306 aa12.69□□□□□ -0.38
CPSF2-203ENST00000554290 C5orf17Q8NAS9 161 aa12.69□□□□□ -0.38
CPSF2-203ENST00000554290 BOLA1Q9Y3E2 137 aa12.69□□□□□ -0.38
CPSF2-203ENST00000554290 TAAR5O14804 337 aa12.68□□□□□ -0.38
CPSF2-203ENST00000554290 PFN1P07737 140 aaKnown RBP12.68□□□□□ -0.38
CPSF2-203ENST00000554290 STAG3L2P0CL84 134 aa12.68□□□□□ -0.38
CPSF2-203ENST00000554290 STAG3L3P0CL85 134 aa12.68□□□□□ -0.38
CPSF2-203ENST00000554290 ZNF876PQ49A33 203 aa12.68□□□□□ -0.38
CPSF2-203ENST00000554290 OR2G3Q8NGZ4 309 aa12.68□□□□□ -0.38
CPSF2-203ENST00000554290 SGK494Q96LW2 274 aa12.68□□□□□ -0.38
CPSF2-203ENST00000554290 IGHV3-38A0A0C4DH36 116 aa12.67□□□□□ -0.38
CPSF2-203ENST00000554290 TCRAP04437 139 aa12.67□□□□□ -0.38
CPSF2-203ENST00000554290 HSD17B11Q8NBQ5 300 aa12.67□□□□□ -0.38
CPSF2-203ENST00000554290 RAB24Q969Q5 203 aa12.67□□□□□ -0.38
CPSF2-203ENST00000554290 PRADC1Q9BSG0 188 aa12.67□□□□□ -0.38
CPSF2-203ENST00000554290 TRAV8-6A0A0B4J262 113 aa12.66□□□□□ -0.38
CPSF2-203ENST00000554290 MBP02144 154 aa12.66□□□□□ -0.38
CPSF2-203ENST00000554290 GCHFRP30047 84 aa12.66□□□□□ -0.38
CPSF2-203ENST00000554290 XGP55808 180 aa12.66□□□□□ -0.38
CPSF2-203ENST00000554290 ZFP69Q49AA0 526 aa12.66□□□□□ -0.38
CPSF2-203ENST00000554290 SLC25A29Q8N8R3 303 aa12.66□□□□□ -0.38
CPSF2-203ENST00000554290 PSMG3Q9BT73 122 aaPredicted RBP12.66□□□□□ -0.38
CPSF2-203ENST00000554290 PSG8Q9UQ74 426 aa12.66□□□□□ -0.38
CPSF2-203ENST00000554290 TRBV6-4A0A1B0GX49 114 aa12.65□□□□□ -0.38
CPSF2-203ENST00000554290 PSCAO43653 123 aa12.65□□□□□ -0.38
CPSF2-203ENST00000554290 GCGP01275 180 aa12.65□□□□□ -0.38
CPSF2-203ENST00000554290 SERF2P84101 59 aa12.65□□□□□ -0.38
CPSF2-203ENST00000554290 CFAP126Q5VTH2 177 aa12.65□□□□□ -0.38
CPSF2-203ENST00000554290 SUN5Q8TC36 379 aa12.65□□□□□ -0.38
CPSF2-203ENST00000554290 ALG5Q9Y673 324 aa12.65□□□□□ -0.38
CPSF2-203ENST00000554290 RS1O15537 224 aa12.64□□□□□ -0.39
CPSF2-203ENST00000554290 GCSHP23434 173 aa12.64□□□□□ -0.39
CPSF2-203ENST00000554290 ATP6V0CP27449 155 aa12.64□□□□□ -0.39
CPSF2-203ENST00000554290 ZNF80P51504 273 aaPredicted RBP12.64□□□□□ -0.39
CPSF2-203ENST00000554290 KRTAP10-1P60331 282 aa12.64□□□□□ -0.39
CPSF2-203ENST00000554290 SUMO1P63165 101 aaKnown RBP12.64□□□□□ -0.39
CPSF2-203ENST00000554290 FLI1Q01543 452 aaPredicted RBP12.64□□□□□ -0.39
CPSF2-203ENST00000554290 RHOHQ15669 191 aa12.64□□□□□ -0.39
CPSF2-203ENST00000554290 SMUG1Q53HV7 270 aa12.64□□□□□ -0.39
CPSF2-203ENST00000554290 LINC01556Q5JQF7 62 aa12.64□□□□□ -0.39
CPSF2-203ENST00000554290 AQP10Q96PS8 301 aa12.64□□□□□ -0.39
CPSF2-203ENST00000554290 TMEM167BQ9NRX6 74 aa12.64□□□□□ -0.39
CPSF2-203ENST00000554290 C11orf21Q9P2W6 132 aa12.64□□□□□ -0.39
CPSF2-203ENST00000554290 CXorf1O96002 111 aa12.63□□□□□ -0.39
CPSF2-203ENST00000554290 OR10J3Q5JRS4 329 aa12.63□□□□□ -0.39
CPSF2-203ENST00000554290 PTH2Q96A98 100 aa12.63□□□□□ -0.39
CPSF2-203ENST00000554290 ACTR3CQ9C0K3 210 aaPredicted RBP12.63□□□□□ -0.39
CPSF2-203ENST00000554290 EPDR1Q9UM22 224 aa12.63□□□□□ -0.39
CPSF2-203ENST00000554290 DNAH5Q8TE73 4624 aa12.63□□□□□ -0.39
CPSF2-203ENST00000554290 APOBP04114 4563 aaKnown RBP12.62□□□□□ -0.39
CPSF2-203ENST00000554290 IBA57-AS1B1ANH7 110 aa12.62□□□□□ -0.39
CPSF2-203ENST00000554290 SAPCD1Q5SSQ6 148 aa12.62□□□□□ -0.39
CPSF2-203ENST00000554290 DPPA3Q6W0C5 159 aa12.62□□□□□ -0.39
CPSF2-203ENST00000554290 PRNTQ86SH4 94 aa12.62□□□□□ -0.39
CPSF2-203ENST00000554290 CYB561D1Q8N8Q1 229 aa12.62□□□□□ -0.39
CPSF2-203ENST00000554290 FRZBQ92765 325 aa12.62□□□□□ -0.39
CPSF2-203ENST00000554290 C9orf85Q96MD7 179 aa12.62□□□□□ -0.39
CPSF2-203ENST00000554290 MED28Q9H204 178 aa12.62□□□□□ -0.39
CPSF2-203ENST00000554290 TNFSF18Q9UNG2 199 aa12.62□□□□□ -0.39
CPSF2-203ENST00000554290 IGHV3-73A0A0B4J1V6 119 aa12.61□□□□□ -0.39
CPSF2-203ENST00000554290 PGPEP1LA6NFU8 196 aa12.61□□□□□ -0.39
CPSF2-203ENST00000554290 IGLV2-11P01706 119 aa12.61□□□□□ -0.39
CPSF2-203ENST00000554290 MGST1P10620 155 aaKnown RBP12.61□□□□□ -0.39
CPSF2-203ENST00000554290 ZNF506Q5JVG8 444 aa12.61□□□□□ -0.39
CPSF2-203ENST00000554290 TMEM75Q8N9X5 138 aa12.61□□□□□ -0.39
CPSF2-203ENST00000554290 GGTLC3B5MD39 225 aa12.6□□□□□ -0.39
CPSF2-203ENST00000554290 LELP1Q5T871 98 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms