RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 PGPEP1Q9NXJ5 209 aa11.8□□□□□ -0.52
NEK9-204ENST00000554258 LRP1Q07954 4544 aaKnown RBP11.79□□□□□ -0.52
NEK9-204ENST00000554258 TRBV6-1A0A0K0K1D8 114 aa11.79□□□□□ -0.52
NEK9-204ENST00000554258 RAB14P61106 215 aa11.79□□□□□ -0.52
NEK9-204ENST00000554258 TMEM78Q5T7P6 136 aa11.79□□□□□ -0.52
NEK9-204ENST00000554258 TMEM75Q8N9X5 138 aa11.79□□□□□ -0.52
NEK9-204ENST00000554258 TRAV8-1A0A0A6YYK1 113 aa11.78□□□□□ -0.52
NEK9-204ENST00000554258 K7EQM0 130 aa11.78□□□□□ -0.52
NEK9-204ENST00000554258 CRXO43186 299 aaPredicted RBP11.78□□□□□ -0.52
NEK9-204ENST00000554258 LINC00479Q96M42 142 aa11.78□□□□□ -0.52
NEK9-204ENST00000554258 NIPSNAP3BQ9BS92 247 aa11.78□□□□□ -0.52
NEK9-204ENST00000554258 C1QTNF4Q9BXJ3 329 aa11.78□□□□□ -0.52
NEK9-204ENST00000554258 RPH3ALQ9UNE2 315 aa11.78□□□□□ -0.52
NEK9-204ENST00000554258 PSG8Q9UQ74 426 aa11.78□□□□□ -0.52
NEK9-204ENST00000554258 SCO2A0A1W2PP80 73 aa11.77□□□□□ -0.53
NEK9-204ENST00000554258 KLLNB2CW77 178 aa11.77□□□□□ -0.53
NEK9-204ENST00000554258 PDE6DO43924 150 aa11.77□□□□□ -0.53
NEK9-204ENST00000554258 TSPOP30536 169 aa11.77□□□□□ -0.53
NEK9-204ENST00000554258 CDKN1BP46527 198 aa11.77□□□□□ -0.53
NEK9-204ENST00000554258 FLI1Q01543 452 aaPredicted RBP11.77□□□□□ -0.53
NEK9-204ENST00000554258 ZFAND2AQ8N6M9 145 aa11.77□□□□□ -0.53
NEK9-204ENST00000554258 TVP23CQ96ET8 276 aa11.77□□□□□ -0.53
NEK9-204ENST00000554258 IGF2BP2-AS1Q96M15 143 aa11.77□□□□□ -0.53
NEK9-204ENST00000554258 M0R2Z0 102 aa11.76□□□□□ -0.53
NEK9-204ENST00000554258 S100A9P06702 114 aaKnown RBP11.76□□□□□ -0.53
NEK9-204ENST00000554258 LEPP41159 167 aa11.76□□□□□ -0.53
NEK9-204ENST00000554258 TMEM183BQ1AE95 376 aa11.76□□□□□ -0.53
NEK9-204ENST00000554258 SPINK13Q1W4C9 94 aa11.76□□□□□ -0.53
NEK9-204ENST00000554258 COX8CQ7Z4L0 72 aa11.76□□□□□ -0.53
NEK9-204ENST00000554258 Q8TAT8 98 aa11.76□□□□□ -0.53
NEK9-204ENST00000554258 TRAV34A0A0B4J273 112 aa11.75□□□□□ -0.53
NEK9-204ENST00000554258 TEX48A0A1B0GUV7 120 aa11.75□□□□□ -0.53
NEK9-204ENST00000554258 TMEM189A5PLL7 270 aa11.75□□□□□ -0.53
NEK9-204ENST00000554258 TMEM250H0YL14 139 aa11.75□□□□□ -0.53
NEK9-204ENST00000554258 FXYD7P58549 80 aa11.75□□□□□ -0.53
NEK9-204ENST00000554258 KRTAP10-1P60331 282 aa11.75□□□□□ -0.53
NEK9-204ENST00000554258 KIR3DS1Q14943 382 aa11.75□□□□□ -0.53
NEK9-204ENST00000554258 TTC32Q5I0X7 151 aa11.75□□□□□ -0.53
NEK9-204ENST00000554258 CDPF1Q6NVV7 123 aa11.75□□□□□ -0.53
NEK9-204ENST00000554258 FMC1Q96HJ9 113 aa11.75□□□□□ -0.53
NEK9-204ENST00000554258 SMDT1Q9H4I9 107 aa11.75□□□□□ -0.53
NEK9-204ENST00000554258 XCL2Q9UBD3 114 aa11.75□□□□□ -0.53
NEK9-204ENST00000554258 AKR1C3P42330 323 aa11.74□□□□□ -0.53
NEK9-204ENST00000554258 CCL18P55774 89 aa11.74□□□□□ -0.53
NEK9-204ENST00000554258 TAS2R60P59551 318 aa11.74□□□□□ -0.53
NEK9-204ENST00000554258 TOR2AQ5JU69 321 aa11.74□□□□□ -0.53
NEK9-204ENST00000554258 FAM222AQ5U5X8 452 aa11.74□□□□□ -0.53
NEK9-204ENST00000554258 C1orf158Q8N1D5 194 aa11.74□□□□□ -0.53
NEK9-204ENST00000554258 SGK494Q96LW2 274 aa11.74□□□□□ -0.53
NEK9-204ENST00000554258 C20orf144Q9BQM9 153 aa11.74□□□□□ -0.53
NEK9-204ENST00000554258 MED9Q9NWA0 146 aa11.74□□□□□ -0.53
NEK9-204ENST00000554258 DKK2Q9UBU2 259 aa11.74□□□□□ -0.53
NEK9-204ENST00000554258 ZFP30Q9Y2G7 519 aa11.74□□□□□ -0.53
NEK9-204ENST00000554258 HAMPP81172 84 aa11.73□□□□□ -0.53
NEK9-204ENST00000554258 SAPCD1Q5SSQ6 148 aa11.73□□□□□ -0.53
NEK9-204ENST00000554258 GFI1BQ5VTD9 330 aa11.73□□□□□ -0.53
NEK9-204ENST00000554258 ZNF705AQ6ZN79 300 aaPredicted RBP11.73□□□□□ -0.53
NEK9-204ENST00000554258 Q86TA4 180 aa11.73□□□□□ -0.53
NEK9-204ENST00000554258 KRTAP1-5Q9BYS1 174 aa11.73□□□□□ -0.53
NEK9-204ENST00000554258 EIF5A2Q9GZV4 153 aaKnown RBP11.73□□□□□ -0.53
NEK9-204ENST00000554258 TRAV12-2A0A075B6T6 113 aa11.72□□□□□ -0.53
NEK9-204ENST00000554258 ZNF324O75467 553 aaPredicted RBP11.72□□□□□ -0.53
NEK9-204ENST00000554258 LTAP01374 205 aa11.72□□□□□ -0.53
NEK9-204ENST00000554258 SRP19P09132 144 aaKnown RBP11.72□□□□□ -0.53
NEK9-204ENST00000554258 PRR9Q5T870 116 aa11.72□□□□□ -0.53
NEK9-204ENST00000554258 PRNTQ86SH4 94 aa11.72□□□□□ -0.53
NEK9-204ENST00000554258 MLST8Q9BVC4 326 aa11.72□□□□□ -0.53
NEK9-204ENST00000554258 TREM1Q9NP99 234 aa11.72□□□□□ -0.53
NEK9-204ENST00000554258 C7orf71A4D174 169 aa11.71□□□□□ -0.53
NEK9-204ENST00000554258 RAB19A4D1S5 217 aa11.71□□□□□ -0.53
NEK9-204ENST00000554258 C9JQL5 133 aa11.71□□□□□ -0.53
NEK9-204ENST00000554258 EREGO14944 169 aa11.71□□□□□ -0.53
NEK9-204ENST00000554258 INSP01308 110 aa11.71□□□□□ -0.53
NEK9-204ENST00000554258 GPX1P07203 203 aa11.71□□□□□ -0.53
NEK9-204ENST00000554258 RPL35P42766 123 aaKnown RBP11.71□□□□□ -0.53
NEK9-204ENST00000554258 UBE2G1P62253 170 aa11.71□□□□□ -0.53
NEK9-204ENST00000554258 SRSF3P84103 164 aaKnown RBP11.71□□□□□ -0.53
NEK9-204ENST00000554258 Q6AWC8 147 aa11.71□□□□□ -0.53
NEK9-204ENST00000554258 NEU1Q99519 415 aa11.71□□□□□ -0.53
NEK9-204ENST00000554258 DERL1Q9BUN8 251 aa11.71□□□□□ -0.53
NEK9-204ENST00000554258 LINC00588Q9Y4M8 146 aa11.71□□□□□ -0.53
NEK9-204ENST00000554258 LRP2P98164 4655 aa11.71□□□□□ -0.54
NEK9-204ENST00000554258 PEA15Q15121 130 aa11.7□□□□□ -0.54
NEK9-204ENST00000554258 TMEM183AQ8IXX5 376 aa11.7□□□□□ -0.54
NEK9-204ENST00000554258 TMEM256Q8N2U0 113 aa11.7□□□□□ -0.54
NEK9-204ENST00000554258 C8orf49Q96NF6 230 aa11.7□□□□□ -0.54
NEK9-204ENST00000554258 NDFIP1Q9BT67 221 aa11.7□□□□□ -0.54
NEK9-204ENST00000554258 Q9H8V8 135 aa11.7□□□□□ -0.54
NEK9-204ENST00000554258 NUDT3O95989 172 aa11.69□□□□□ -0.54
NEK9-204ENST00000554258 RNASE4P34096 147 aaKnown RBP11.69□□□□□ -0.54
NEK9-204ENST00000554258 BTN1A1Q13410 526 aa11.69□□□□□ -0.54
NEK9-204ENST00000554258 SMUG1Q53HV7 270 aa11.69□□□□□ -0.54
NEK9-204ENST00000554258 BAGE2Q86Y30 109 aa11.69□□□□□ -0.54
NEK9-204ENST00000554258 LINC00467Q9BRT7 94 aa11.69□□□□□ -0.54
NEK9-204ENST00000554258 GOLT1BQ9Y3E0 138 aa11.69□□□□□ -0.54
NEK9-204ENST00000554258 FAT3Q8TDW7 4589 aa11.68□□□□□ -0.54
NEK9-204ENST00000554258 TRAV12-3A0A0B4J271 114 aa11.68□□□□□ -0.54
NEK9-204ENST00000554258 LINC00862A6NCI5 91 aa11.68□□□□□ -0.54
NEK9-204ENST00000554258 IGLV2-8P01709 118 aa11.68□□□□□ -0.54
NEK9-204ENST00000554258 ZNF80P51504 273 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms