RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 IBA57Q5T440 356 aaKnown RBP3.72□□□□□ -1.81
VTI1B-202ENST00000553619 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 FAM231DQ6ZW35 169 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 COX8CQ7Z4L0 72 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 LINC01551Q86U37 167 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 OR4B1Q8NGF8 309 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 OR10G8Q8NGN5 311 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 RPL36ALQ969Q0 106 aaKnown RBP3.72□□□□□ -1.81
VTI1B-202ENST00000553619 ISOC2Q96AB3 205 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 SFRP2Q96HF1 295 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 LINC00479Q96M42 142 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 VGLL1Q99990 258 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 DERL1Q9BUN8 251 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 NIT2Q9NQR4 276 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 ZNF256Q9Y2P7 627 aaPredicted RBP3.72□□□□□ -1.81
VTI1B-202ENST00000553619 SORL1Q92673 2214 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 AKAP9Q99996 3911 aa3.72□□□□□ -1.81
VTI1B-202ENST00000553619 NSD1Q96L73 2696 aaPredicted RBP3.71□□□□□ -1.82
VTI1B-202ENST00000553619 TRAV21A0A0B4J279 112 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 TMEM189A5PLL7 270 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 FAM231BA6NCW3 169 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 ZNF705GA8MUZ8 300 aaPredicted RBP3.71□□□□□ -1.82
VTI1B-202ENST00000553619 A8MWL6 223 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 PRAC2D3DTV9 90 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 TSTD3H0UI37 97 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 H0Y8G0 127 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 H7BYZ3 331 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 IGLV2-11P01706 119 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 IGLV2-8P01709 118 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 P01737 135 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 HLA-DRB4P13762 266 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 IGLL1P15814 213 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 CRISP2P16562 243 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 CDKN1BP46527 198 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 ACTL10Q5JWF8 245 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 FAM162BQ5T6X4 162 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 WDR73Q6P4I2 378 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 MORN3Q6PF18 240 aaPredicted RBP3.71□□□□□ -1.82
VTI1B-202ENST00000553619 KCNIP4Q6PIL6 250 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 Q86TA4 180 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 MRPL52Q86TS9 123 aaKnown RBP3.71□□□□□ -1.82
VTI1B-202ENST00000553619 SPATA3Q8NHX4 192 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 KCNS1Q96KK3 526 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 SGK494Q96LW2 274 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 IGF2BP2-AS1Q96M15 143 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 IMMP2LQ96T52 175 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 C20orf144Q9BQM9 153 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 C1QTNF4Q9BXJ3 329 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 TUBA4BQ9H853 241 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 MAP6D1Q9H9H5 199 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 SMCO4Q9NRQ5 59 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 SELENOKQ9Y6D0 94 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 HLA-DRB4X5D2U9 266 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 OTOGQ6ZRI0 2925 aa3.71□□□□□ -1.82
VTI1B-202ENST00000553619 TRBV20OR9-2A0A075B6H5 130 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 TRAV9-1A0A075B6T8 112 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 TRAV8-1A0A0A6YYK1 113 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 IZUMO1RA6ND01 250 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 CBY3A6NI87 242 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 A8MTW9 85 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 H3BMM0 161 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 ORM1P02763 201 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 PFN1P07737 140 aaKnown RBP3.7□□□□□ -1.82
VTI1B-202ENST00000553619 ZNF705DP0CH99 300 aaPredicted RBP3.7□□□□□ -1.82
VTI1B-202ENST00000553619 ZNF705BP0CI00 300 aaPredicted RBP3.7□□□□□ -1.82
VTI1B-202ENST00000553619 OR5I1Q13606 314 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 COX19Q49B96 90 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 Q6AWC8 147 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 PRR27Q6MZM9 219 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 FAM24BQ8N5W8 94 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 OR2D3Q8NGH3 330 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 BORCS7Q96B45 105 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 FAM19A4Q96LR4 140 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 GFRA4Q9GZZ7 299 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 IL36BQ9NZH7 164 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 SVEP1Q4LDE5 3571 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 ZFHX3Q15911 3703 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 MXRA5Q9NR99 2828 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 JMJD1CQ15652 2540 aa3.7□□□□□ -1.82
VTI1B-202ENST00000553619 C7orf71A4D174 169 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 C19orf71A6NCJ1 209 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 PGPEP1LA6NFU8 196 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 KNCNA6PVL3 124 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 F6UB75 175 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 K7EN84 100 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 UBE2CO00762 179 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 SCO1O75880 301 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 CD7P09564 240 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 RNASE4P34096 147 aaKnown RBP3.69□□□□□ -1.82
VTI1B-202ENST00000553619 PKIAP61925 76 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 ODF1Q14990 250 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 ODF3L2Q3SX64 289 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 FAM159AQ6UWV7 190 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 APRG1Q8IVJ8 170 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 TMEM256Q8N2U0 113 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 NHLRC2Q8NBF2 726 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 TSKUQ8WUA8 353 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 ZC2HC1AQ96GY0 325 aa3.69□□□□□ -1.82
VTI1B-202ENST00000553619 RNASE7Q9H1E1 156 aaKnown RBP3.69□□□□□ -1.82
VTI1B-202ENST00000553619 RPP21Q9H633 154 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms