RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SLC25A31Q9H0C2 315 aa4.77□□□□□ -1.65
ATXN3-219ENST00000553488 DNAJC4Q9NNZ3 241 aa4.77□□□□□ -1.65
ATXN3-219ENST00000553488 TMEM14CQ9P0S9 112 aa4.77□□□□□ -1.65
ATXN3-219ENST00000553488 ZNF492Q9P255 531 aa4.77□□□□□ -1.65
ATXN3-219ENST00000553488 PRELID1Q9Y255 219 aa4.77□□□□□ -1.65
ATXN3-219ENST00000553488 TRBV7-9A0A0J9YWB2 115 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 C9orf170A2RU37 121 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 C7orf66A4D0T2 115 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 A4D1N5 150 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 MT1HL1P0DM35 61 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 PYYP10082 97 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 HIST1H1EP10412 219 aaKnown RBP4.76□□□□□ -1.65
ATXN3-219ENST00000553488 GATA1P15976 413 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-219ENST00000553488 TNFSF8P32971 234 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 CAMLGP49069 296 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 MUC21Q5SSG8 566 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 TMEM78Q5T7P6 136 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 SH2D6Q7Z4S9 175 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 NRARPQ7Z6K4 114 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 Q8TAT8 98 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 CIRBP-AS1Q8TBR5 109 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 PFDN5Q99471 154 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 CHAC1Q9BUX1 264 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 SLIRPQ9GZT3 109 aaKnown RBP4.76□□□□□ -1.65
ATXN3-219ENST00000553488 WDR83OSQ9Y284 106 aa4.76□□□□□ -1.65
ATXN3-219ENST00000553488 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-219ENST00000553488 TRAV34A0A0B4J273 112 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 FABP12A6NFH5 140 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 LECT2O14960 151 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 IGLV2-8P01709 118 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 IGHV3-30P01768 117 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 IGHV3-33P01772 117 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 IGHV3-30-3P0DP02 117 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 IGHV3-30-5P0DP03 117 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 PPT1P50897 306 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 AP3S2P59780 193 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 ASAH1Q13510 395 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 ZNF266Q14584 549 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 VWC2Q2TAL6 325 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 Q6AWC8 147 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 Q6ZRG5 221 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 TOMM5Q8N4H5 51 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 NHLRC2Q8NBF2 726 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 OR1L4Q8NGR5 311 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 DEDD2Q8WXF8 326 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 SPXQ9BT56 116 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 C11orf1Q9H5F2 150 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 V9GYH0 126 aa4.75□□□□□ -1.65
ATXN3-219ENST00000553488 TRAV8-6A0A0B4J262 113 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 IGHV3-16A0A0C4DH30 117 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 MBPP02686 304 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-219ENST00000553488 RPL29P47914 159 aaKnown RBP4.74□□□□□ -1.65
ATXN3-219ENST00000553488 ZNF138P52744 262 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 TMEM183BQ1AE95 376 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 IAH1Q2TAA2 248 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-219ENST00000553488 TDRG1Q3Y452 100 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 OR10J3Q5JRS4 329 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 LELP1Q5T871 98 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 CST9LP1Q5W188 147 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 FAM122CQ6P4D5 195 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 TMEM183AQ8IXX5 376 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 OR4C5Q8NGB2 326 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 FAM167A-AS1Q96KT0 104 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 TM2D2Q9BX73 214 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 SLC25A2Q9BXI2 301 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 SLC39A9Q9NUM3 307 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 NDUFA13Q9P0J0 144 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 TIMM9Q9Y5J7 89 aa4.74□□□□□ -1.65
ATXN3-219ENST00000553488 UBE2L5PA0A1B0GUS4 154 aa4.73□□□□□ -1.65
ATXN3-219ENST00000553488 M0R2P5 195 aa4.73□□□□□ -1.65
ATXN3-219ENST00000553488 RS1O15537 224 aa4.73□□□□□ -1.65
ATXN3-219ENST00000553488 GCSAMLQ5JQS6 135 aa4.73□□□□□ -1.65
ATXN3-219ENST00000553488 SLC25A29Q8N8R3 303 aa4.73□□□□□ -1.65
ATXN3-219ENST00000553488 PHYHIPLQ96FC7 376 aa4.73□□□□□ -1.65
ATXN3-219ENST00000553488 FAM210AQ96ND0 272 aa4.73□□□□□ -1.65
ATXN3-219ENST00000553488 AAMDCQ9H7C9 122 aa4.73□□□□□ -1.65
ATXN3-219ENST00000553488 UQCC1Q9NVA1 299 aa4.73□□□□□ -1.65
ATXN3-219ENST00000553488 FLVCR2Q9UPI3 526 aa4.73□□□□□ -1.65
ATXN3-219ENST00000553488 RBAKDNA6NC62 111 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 FBLL1A6NHQ2 334 aaKnown RBP4.72□□□□□ -1.65
ATXN3-219ENST00000553488 CST7O76096 145 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 NDUFB6O95139 128 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 IGLV2-11P01706 119 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 PFN1P07737 140 aaKnown RBP4.72□□□□□ -1.65
ATXN3-219ENST00000553488 LINC00694P0DN24 101 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 CAMPP49913 170 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 CAV2P51636 162 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 RAB31Q13636 194 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 PYDC2Q56P42 97 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 WDR73Q6P4I2 378 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 DPPA3Q6W0C5 159 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 C12orf45Q8N5I9 185 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-219ENST00000553488 BAALCQ8WXS3 180 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 FXYD5Q96DB9 178 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 BCL7BQ9BQE9 202 aa4.72□□□□□ -1.65
ATXN3-219ENST00000553488 TRAV8-3A0A0A6YYJ7 113 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 TRBV6-4A0A1B0GX49 114 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 RNF222A6NCQ9 220 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 FAM24AA6NFZ4 105 aa4.71□□□□□ -1.66
ATXN3-219ENST00000553488 CCSO14618 274 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms