RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 UBE2G2P60604 165 aa10.73□□□□□ -0.69
SHMT2-204ENST00000553324 EIF5AL1Q6IS14 154 aaKnown RBP10.73□□□□□ -0.69
SHMT2-204ENST00000553324 Q6ZNX1 250 aa10.73□□□□□ -0.69
SHMT2-204ENST00000553324 PRNTQ86SH4 94 aa10.73□□□□□ -0.69
SHMT2-204ENST00000553324 MBD3L1Q8WWY6 194 aa10.73□□□□□ -0.69
SHMT2-204ENST00000553324 RASL10AQ92737 203 aa10.73□□□□□ -0.69
SHMT2-204ENST00000553324 PEX7O00628 323 aa10.72□□□□□ -0.69
SHMT2-204ENST00000553324 PFN1P07737 140 aaKnown RBP10.72□□□□□ -0.69
SHMT2-204ENST00000553324 LGALSLQ3ZCW2 172 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-204ENST00000553324 SFT2D1Q8WV19 159 aa10.72□□□□□ -0.69
SHMT2-204ENST00000553324 GNRH2O43555 120 aa10.71□□□□□ -0.69
SHMT2-204ENST00000553324 GCGP01275 180 aa10.71□□□□□ -0.69
SHMT2-204ENST00000553324 RAB5CP51148 216 aa10.71□□□□□ -0.69
SHMT2-204ENST00000553324 FAM213BQ8TBF2 198 aa10.71□□□□□ -0.69
SHMT2-204ENST00000553324 MRPL16Q9NX20 251 aaKnown RBP10.71□□□□□ -0.69
SHMT2-204ENST00000553324 EPPK1P58107 5090 aaKnown RBP10.71□□□□□ -0.7
SHMT2-204ENST00000553324 IGHV3-16A0A0C4DH30 117 aa10.7□□□□□ -0.7
SHMT2-204ENST00000553324 A0A0J9YY99 117 aa10.7□□□□□ -0.7
SHMT2-204ENST00000553324 M0R2P5 195 aa10.7□□□□□ -0.7
SHMT2-204ENST00000553324 H2AFB1P0C5Y9 115 aa10.7□□□□□ -0.7
SHMT2-204ENST00000553324 CST9LP1Q5W188 147 aa10.7□□□□□ -0.7
SHMT2-204ENST00000553324 LINC00479Q96M42 142 aa10.7□□□□□ -0.7
SHMT2-204ENST00000553324 C8orf49Q96NF6 230 aa10.7□□□□□ -0.7
SHMT2-204ENST00000553324 PRO0255Q9UI72 69 aa10.7□□□□□ -0.7
SHMT2-204ENST00000553324 HHLA3Q9XRX5 114 aa10.7□□□□□ -0.7
SHMT2-204ENST00000553324 ZFP30Q9Y2G7 519 aa10.7□□□□□ -0.7
SHMT2-204ENST00000553324 DNAH10Q8IVF4 4471 aa10.7□□□□□ -0.7
SHMT2-204ENST00000553324 FABP5P3A8MUU1 101 aa10.69□□□□□ -0.7
SHMT2-204ENST00000553324 TYMSP04818 313 aa10.69□□□□□ -0.7
SHMT2-204ENST00000553324 LINC00336Q6ZUF6 198 aa10.69□□□□□ -0.7
SHMT2-204ENST00000553324 FMC1Q96HJ9 113 aa10.69□□□□□ -0.7
SHMT2-204ENST00000553324 TRAV34A0A0B4J273 112 aa10.68□□□□□ -0.7
SHMT2-204ENST00000553324 TEX46H3BTG2 121 aa10.68□□□□□ -0.7
SHMT2-204ENST00000553324 M0R2N4 97 aa10.68□□□□□ -0.7
SHMT2-204ENST00000553324 PAX4O43316 350 aa10.68□□□□□ -0.7
SHMT2-204ENST00000553324 C1QBP02746 253 aa10.68□□□□□ -0.7
SHMT2-204ENST00000553324 ZNF80P51504 273 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-204ENST00000553324 UBE2G1P62253 170 aa10.68□□□□□ -0.7
SHMT2-204ENST00000553324 FRAS1Q86XX4 4008 aa10.68□□□□□ -0.7
SHMT2-204ENST00000553324 IGLV2-18A0A075B6J9 118 aa10.67□□□□□ -0.7
SHMT2-204ENST00000553324 TRGV4A0A0C4DH28 118 aa10.67□□□□□ -0.7
SHMT2-204ENST00000553324 TRBV6-1A0A0K0K1D8 114 aa10.67□□□□□ -0.7
SHMT2-204ENST00000553324 CIDEAO60543 219 aa10.67□□□□□ -0.7
SHMT2-204ENST00000553324 PAGE4O60829 102 aa10.67□□□□□ -0.7
SHMT2-204ENST00000553324 IGHV3-53P01767 116 aa10.67□□□□□ -0.7
SHMT2-204ENST00000553324 S100A9P06702 114 aaKnown RBP10.67□□□□□ -0.7
SHMT2-204ENST00000553324 FHL2Q14192 279 aa10.67□□□□□ -0.7
SHMT2-204ENST00000553324 SOHLH1Q5JUK2 328 aa10.67□□□□□ -0.7
SHMT2-204ENST00000553324 VSIG2Q96IQ7 327 aa10.67□□□□□ -0.7
SHMT2-204ENST00000553324 LINC00588Q9Y4M8 146 aa10.67□□□□□ -0.7
SHMT2-204ENST00000553324 TRAV4A0A0B4J268 109 aa10.66□□□□□ -0.7
SHMT2-204ENST00000553324 CRYBA4P53673 196 aa10.66□□□□□ -0.7
SHMT2-204ENST00000553324 COX8CQ7Z4L0 72 aa10.66□□□□□ -0.7
SHMT2-204ENST00000553324 AKAP14Q86UN6 197 aa10.66□□□□□ -0.7
SHMT2-204ENST00000553324 SLC51BQ86UW2 128 aa10.66□□□□□ -0.7
SHMT2-204ENST00000553324 OR4C5Q8NGB2 326 aa10.66□□□□□ -0.7
SHMT2-204ENST00000553324 ZNRF2Q8NHG8 242 aa10.66□□□□□ -0.7
SHMT2-204ENST00000553324 ICOSQ9Y6W8 199 aa10.66□□□□□ -0.7
SHMT2-204ENST00000553324 A0A096LPF7 62 aa10.65□□□□□ -0.7
SHMT2-204ENST00000553324 MRPL23Q16540 153 aaKnown RBP10.65□□□□□ -0.7
SHMT2-204ENST00000553324 Q6ZR54 194 aa10.65□□□□□ -0.7
SHMT2-204ENST00000553324 Q86TA4 180 aa10.65□□□□□ -0.7
SHMT2-204ENST00000553324 PTH2Q96A98 100 aa10.65□□□□□ -0.7
SHMT2-204ENST00000553324 C11orf21Q9P2W6 132 aa10.65□□□□□ -0.7
SHMT2-204ENST00000553324 DNAH2Q9P225 4427 aa10.64□□□□□ -0.71
SHMT2-204ENST00000553324 TRAV1-1A0A0B4J248 108 aa10.64□□□□□ -0.71
SHMT2-204ENST00000553324 ORM1P02763 201 aa10.64□□□□□ -0.71
SHMT2-204ENST00000553324 S100A4P26447 101 aaKnown RBP10.64□□□□□ -0.71
SHMT2-204ENST00000553324 AKR1C3P42330 323 aa10.64□□□□□ -0.71
SHMT2-204ENST00000553324 ESRGQ1W209 222 aa10.64□□□□□ -0.71
SHMT2-204ENST00000553324 ZNF876PQ49A33 203 aa10.64□□□□□ -0.71
SHMT2-204ENST00000553324 ZNF479Q96JC4 524 aa10.64□□□□□ -0.71
SHMT2-204ENST00000553324 UPK3BQ9BT76 320 aa10.64□□□□□ -0.71
SHMT2-204ENST00000553324 Q9H8V8 135 aa10.64□□□□□ -0.71
SHMT2-204ENST00000553324 A0A1B0GV50 99 aa10.63□□□□□ -0.71
SHMT2-204ENST00000553324 LTAP01374 205 aa10.63□□□□□ -0.71
SHMT2-204ENST00000553324 SULT1A2P50226 295 aa10.63□□□□□ -0.71
SHMT2-204ENST00000553324 FAM162BQ5T6X4 162 aa10.63□□□□□ -0.71
SHMT2-204ENST00000553324 TXNDC17Q9BRA2 123 aa10.63□□□□□ -0.71
SHMT2-204ENST00000553324 MANBALQ9NQG1 85 aa10.63□□□□□ -0.71
SHMT2-204ENST00000553324 MUC4Q99102 2169 aa10.62□□□□□ -0.71
SHMT2-204ENST00000553324 IGKV3D-20A0A0C4DH25 116 aa10.62□□□□□ -0.71
SHMT2-204ENST00000553324 NBDYA0A0U1RRE5 68 aa10.62□□□□□ -0.71
SHMT2-204ENST00000553324 C9JCJ5 164 aa10.62□□□□□ -0.71
SHMT2-204ENST00000553324 SFTA3P0C7M3 94 aa10.62□□□□□ -0.71
SHMT2-204ENST00000553324 PIK3CD-AS1Q5SR53 167 aa10.62□□□□□ -0.71
SHMT2-204ENST00000553324 C1orf134Q5TEV5 83 aa10.62□□□□□ -0.71
SHMT2-204ENST00000553324 PCNPQ8WW12 178 aaKnown RBP10.62□□□□□ -0.71
SHMT2-204ENST00000553324 C9orf85Q96MD7 179 aa10.62□□□□□ -0.71
SHMT2-204ENST00000553324 MRPS16Q9Y3D3 137 aaKnown RBP10.62□□□□□ -0.71
SHMT2-204ENST00000553324 B4DEV8 164 aa10.61□□□□□ -0.71
SHMT2-204ENST00000553324 RNASE3P12724 160 aaKnown RBP10.61□□□□□ -0.71
SHMT2-204ENST00000553324 ASIPP42127 132 aa10.61□□□□□ -0.71
SHMT2-204ENST00000553324 CRIP1P50238 77 aa10.61□□□□□ -0.71
SHMT2-204ENST00000553324 ZNF674Q2M3X9 581 aa10.61□□□□□ -0.71
SHMT2-204ENST00000553324 TTC32Q5I0X7 151 aa10.61□□□□□ -0.71
SHMT2-204ENST00000553324 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
SHMT2-204ENST00000553324 SH2D6Q7Z4S9 175 aa10.61□□□□□ -0.71
SHMT2-204ENST00000553324 ZC2HC1AQ96GY0 325 aa10.61□□□□□ -0.71
SHMT2-204ENST00000553324 BIRC6Q9NR09 4857 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms