RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 CCL19Q99731 98 aa0.42□□□□□ -2.34
USP44-207ENST00000552237 SLC35B3Q9H1N7 401 aa0.42□□□□□ -2.34
USP44-207ENST00000552237 MRPL40Q9NQ50 206 aaKnown RBP0.42□□□□□ -2.34
USP44-207ENST00000552237 BATF3Q9NR55 127 aa0.42□□□□□ -2.34
USP44-207ENST00000552237 MRPL35Q9NZE8 188 aaKnown RBP0.42□□□□□ -2.34
USP44-207ENST00000552237 SCP2D1Q9UJQ7 156 aa0.42□□□□□ -2.34
USP44-207ENST00000552237 ERG28Q9UKR5 140 aa0.42□□□□□ -2.34
USP44-207ENST00000552237 GINS2Q9Y248 185 aa0.42□□□□□ -2.34
USP44-207ENST00000552237 TCOF1Q13428 1488 aaKnown RBP0.41□□□□□ -2.34
USP44-207ENST00000552237 PARP14Q460N5 1801 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 XIRP1Q702N8 1843 aaKnown RBP0.41□□□□□ -2.34
USP44-207ENST00000552237 DOCK11Q5JSL3 2073 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 OVOS2A0A0G2JMS6 1433 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 USP54Q70EL1 1684 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 MYH6P13533 1939 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 TCHHQ07283 1943 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 TRAV12-2A0A075B6T6 113 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 TRAV17A0A0B4J275 112 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 LOC107984640A0A0U1RRK4 108 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 TCRBV3S1A0A5B6 114 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 RBAKDNA6NC62 111 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 ZNF670-ZNF695F2Z2N8 137 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 CCDC179H3BU77 68 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 M0QZK8 103 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 DEGS1O15121 323 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 IGLV1-51P01701 117 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 IL7P13232 177 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 POLR2HP52434 150 aaKnown RBP0.41□□□□□ -2.34
USP44-207ENST00000552237 FOXA3P55318 350 aaPredicted RBP0.41□□□□□ -2.34
USP44-207ENST00000552237 RPS28P62857 69 aaKnown RBP0.41□□□□□ -2.34
USP44-207ENST00000552237 IQCJQ1A5X6 159 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 Q8N6K4 173 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 CCL4L1Q8NHW4 92 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 TMEM141Q96I45 108 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 PSMG3Q9BT73 122 aaPredicted RBP0.41□□□□□ -2.34
USP44-207ENST00000552237 SAR1AQ9NR31 198 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 CBLN4Q9NTU7 201 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 BET1LQ9NYM9 111 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 MRPL36Q9P0J6 103 aaKnown RBP0.41□□□□□ -2.34
USP44-207ENST00000552237 METTL1Q9UBP6 276 aaKnown RBP0.41□□□□□ -2.34
USP44-207ENST00000552237 CDK5RAP2Q96SN8 1893 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 NAV2Q8IVL1 2488 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 MED13LQ71F56 2210 aa0.41□□□□□ -2.34
USP44-207ENST00000552237 CCDC171Q6TFL3 1326 aa0.4□□□□□ -2.34
USP44-207ENST00000552237 ABCA1O95477 2261 aa0.4□□□□□ -2.34
USP44-207ENST00000552237 USP24Q9UPU5 2620 aa0.4□□□□□ -2.34
USP44-207ENST00000552237 FGD6Q6ZV73 1430 aa0.4□□□□□ -2.34
USP44-207ENST00000552237 LOC285556D6RIA3 1793 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 RBBP6Q7Z6E9 1792 aaKnown RBP0.4□□□□□ -2.35
USP44-207ENST00000552237 KCPQ6ZWJ8 1503 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 TRAV36DV7A0A075B6V5 113 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 TRBV10-1A0A0K0K1A3 114 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 C9JAW5 83 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 J3QLW9 94 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 IGF2P01344 180 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 SCGB1A1P11684 91 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 SLC25A4P12235 298 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 ADCYAP1P18509 176 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 C10orf99Q6UWK7 81 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 CYP2G1PQ6ZSU1 146 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 AKAP14Q86UN6 197 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 NDUFA11Q86Y39 141 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 LINC00269Q8N2A0 174 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 COPS9Q8WXC6 57 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 PRR15LQ9BU68 103 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 BANF2Q9H503 90 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 FKBP11Q9NYL4 201 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 NOP16Q9Y3C1 178 aaKnown RBP0.4□□□□□ -2.35
USP44-207ENST00000552237 RFX7Q2KHR2 1363 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 MED23Q9ULK4 1368 aa0.4□□□□□ -2.35
USP44-207ENST00000552237 CDK12Q9NYV4 1490 aaPredicted RBP0.4□□□□□ -2.35
USP44-207ENST00000552237 PHRF1Q9P1Y6 1649 aaKnown RBP0.39□□□□□ -2.35
USP44-207ENST00000552237 KIF13AQ9H1H9 1805 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 A0A1B0GX51 115 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 A6NN06 94 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 M0R2Z0 102 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 CDC42EP2O14613 210 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 OR2H2O95918 312 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 IFNA17P01571 189 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 APODP05090 189 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 CCKP06307 115 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 SCTP09683 121 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 PIPP12273 146 aaPredicted RBP0.39□□□□□ -2.35
USP44-207ENST00000552237 AKR1D1P51857 326 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 KLKP1Q107X0 134 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 LYPD5Q6UWN5 251 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 ZCCHC23Q6ZST2 131 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 TAC4Q86UU9 113 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 SNX29P2Q8IUI4 249 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 ATP6V0E2Q8NHE4 81 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 OTOSQ8NHW6 89 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 NAT14Q8WUY8 206 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 TCEAL4Q96EI5 215 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 NABP2Q9BQ15 211 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 LIMD2Q9BT23 127 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 TMEM14BQ9NUH8 114 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 PLAC8Q9NZF1 115 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 COMMD3Q9UBI1 195 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 NDUFAF1Q9Y375 327 aa0.39□□□□□ -2.35
USP44-207ENST00000552237 UHRF1BP1LA0JNW5 1464 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms