RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 IL7P13232 177 aa9.43□□□□□ -0.9
CHMP1A-210ENST00000551981 RAB32Q13637 225 aa9.43□□□□□ -0.9
CHMP1A-210ENST00000551981 TMED6Q8WW62 240 aa9.43□□□□□ -0.9
CHMP1A-210ENST00000551981 PRADC1Q9BSG0 188 aa9.43□□□□□ -0.9
CHMP1A-210ENST00000551981 TRAV6A0A075B6T7 132 aa9.42□□□□□ -0.9
CHMP1A-210ENST00000551981 DIRC3C9JPN6 131 aa9.42□□□□□ -0.9
CHMP1A-210ENST00000551981 GNRH2O43555 120 aa9.42□□□□□ -0.9
CHMP1A-210ENST00000551981 UBE2L3P68036 154 aaKnown RBP9.42□□□□□ -0.9
CHMP1A-210ENST00000551981 RHOHQ15669 191 aa9.42□□□□□ -0.9
CHMP1A-210ENST00000551981 LELP1Q5T871 98 aa9.42□□□□□ -0.9
CHMP1A-210ENST00000551981 OR5C1Q8NGR4 320 aa9.42□□□□□ -0.9
CHMP1A-210ENST00000551981 SDHCQ99643 169 aaPredicted RBP9.42□□□□□ -0.9
CHMP1A-210ENST00000551981 SEC22CQ9BRL7 303 aa9.42□□□□□ -0.9
CHMP1A-210ENST00000551981 SDF2L1Q9HCN8 221 aa9.42□□□□□ -0.9
CHMP1A-210ENST00000551981 FAT3Q8TDW7 4589 aa9.41□□□□□ -0.9
CHMP1A-210ENST00000551981 TRAV21A0A0B4J279 112 aa9.41□□□□□ -0.9
CHMP1A-210ENST00000551981 C17orf112F2Z3M2 114 aa9.41□□□□□ -0.9
CHMP1A-210ENST00000551981 CIDEAO60543 219 aa9.41□□□□□ -0.9
CHMP1A-210ENST00000551981 TCRBP04435 133 aa9.41□□□□□ -0.9
CHMP1A-210ENST00000551981 SLC25A29Q8N8R3 303 aa9.41□□□□□ -0.9
CHMP1A-210ENST00000551981 KCNS1Q96KK3 526 aa9.41□□□□□ -0.9
CHMP1A-210ENST00000551981 SH3BGRL3Q9H299 93 aa9.41□□□□□ -0.9
CHMP1A-210ENST00000551981 NUDT15Q9NV35 164 aa9.41□□□□□ -0.9
CHMP1A-210ENST00000551981 TRAV8-3A0A0A6YYJ7 113 aa9.4□□□□□ -0.9
CHMP1A-210ENST00000551981 TRBV6-4A0A1B0GX49 114 aa9.4□□□□□ -0.9
CHMP1A-210ENST00000551981 LYRM1O43325 122 aa9.4□□□□□ -0.9
CHMP1A-210ENST00000551981 TYMSP04818 313 aa9.4□□□□□ -0.9
CHMP1A-210ENST00000551981 NHLH2Q02577 135 aa9.4□□□□□ -0.9
CHMP1A-210ENST00000551981 IL15RAQ13261 267 aa9.4□□□□□ -0.9
CHMP1A-210ENST00000551981 CMTM2Q8TAZ6 248 aa9.4□□□□□ -0.9
CHMP1A-210ENST00000551981 HYLS1Q96M11 299 aa9.4□□□□□ -0.9
CHMP1A-210ENST00000551981 GTSF1LQ9H1H1 148 aa9.4□□□□□ -0.9
CHMP1A-210ENST00000551981 WFDC2Q14508 124 aa9.39□□□□□ -0.91
CHMP1A-210ENST00000551981 ZNF876PQ49A33 203 aa9.39□□□□□ -0.91
CHMP1A-210ENST00000551981 KHDC3LQ587J8 217 aa9.39□□□□□ -0.91
CHMP1A-210ENST00000551981 TOR2AQ5JU69 321 aa9.39□□□□□ -0.91
CHMP1A-210ENST00000551981 FAM74A1Q5RGS3 127 aa9.39□□□□□ -0.91
CHMP1A-210ENST00000551981 ASB13Q8WXK3 278 aa9.39□□□□□ -0.91
CHMP1A-210ENST00000551981 WDR61Q9GZS3 305 aaKnown RBP9.39□□□□□ -0.91
CHMP1A-210ENST00000551981 OTORQ9NRC9 128 aa9.39□□□□□ -0.91
CHMP1A-210ENST00000551981 RPH3ALQ9UNE2 315 aa9.39□□□□□ -0.91
CHMP1A-210ENST00000551981 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.38□□□□□ -0.91
CHMP1A-210ENST00000551981 LECT2O14960 151 aa9.38□□□□□ -0.91
CHMP1A-210ENST00000551981 PLA2G10O15496 165 aa9.38□□□□□ -0.91
CHMP1A-210ENST00000551981 TAS2R45P59539 299 aa9.38□□□□□ -0.91
CHMP1A-210ENST00000551981 ASAH1Q13510 395 aa9.38□□□□□ -0.91
CHMP1A-210ENST00000551981 CFAP126Q5VTH2 177 aa9.38□□□□□ -0.91
CHMP1A-210ENST00000551981 ATP6V0E2Q8NHE4 81 aa9.38□□□□□ -0.91
CHMP1A-210ENST00000551981 NMES1Q9C002 83 aa9.38□□□□□ -0.91
CHMP1A-210ENST00000551981 COX11Q9Y6N1 276 aa9.38□□□□□ -0.91
CHMP1A-210ENST00000551981 F6UZH7 168 aa9.37□□□□□ -0.91
CHMP1A-210ENST00000551981 RS1O15537 224 aa9.37□□□□□ -0.91
CHMP1A-210ENST00000551981 OXTP01178 125 aa9.37□□□□□ -0.91
CHMP1A-210ENST00000551981 SCXQ7RTU7 201 aa9.37□□□□□ -0.91
CHMP1A-210ENST00000551981 RBM38Q9H0Z9 239 aaKnown RBP9.37□□□□□ -0.91
CHMP1A-210ENST00000551981 TREM1Q9NP99 234 aa9.37□□□□□ -0.91
CHMP1A-210ENST00000551981 PLA2G2DQ9UNK4 145 aa9.37□□□□□ -0.91
CHMP1A-210ENST00000551981 IGHV3-73A0A0B4J1V6 119 aa9.36□□□□□ -0.91
CHMP1A-210ENST00000551981 H2AFB2P0C5Z0 115 aa9.36□□□□□ -0.91
CHMP1A-210ENST00000551981 MGST1P10620 155 aaKnown RBP9.36□□□□□ -0.91
CHMP1A-210ENST00000551981 GOLT1AQ6ZVE7 132 aa9.36□□□□□ -0.91
CHMP1A-210ENST00000551981 PGPA6NDG6 321 aa9.35□□□□□ -0.91
CHMP1A-210ENST00000551981 RBFOX3A6NFN3 312 aa9.35□□□□□ -0.91
CHMP1A-210ENST00000551981 GGTLC3B5MD39 225 aa9.35□□□□□ -0.91
CHMP1A-210ENST00000551981 FFAR4Q5NUL3 377 aa9.35□□□□□ -0.91
CHMP1A-210ENST00000551981 ARL6IP6Q8N6S5 226 aa9.35□□□□□ -0.91
CHMP1A-210ENST00000551981 RMI2Q96E14 147 aa9.35□□□□□ -0.91
CHMP1A-210ENST00000551981 NDFIP1Q9BT67 221 aa9.35□□□□□ -0.91
CHMP1A-210ENST00000551981 CHAC1Q9BUX1 264 aa9.35□□□□□ -0.91
CHMP1A-210ENST00000551981 MBD2Q9UBB5 411 aa9.35□□□□□ -0.91
CHMP1A-210ENST00000551981 ACOT6Q3I5F7 207 aaPredicted RBP9.34□□□□□ -0.91
CHMP1A-210ENST00000551981 LINC01620Q4KN68 170 aa9.34□□□□□ -0.91
CHMP1A-210ENST00000551981 DPPA3Q6W0C5 159 aa9.34□□□□□ -0.91
CHMP1A-210ENST00000551981 Q8N976 141 aa9.34□□□□□ -0.91
CHMP1A-210ENST00000551981 BAALCQ8WXS3 180 aa9.34□□□□□ -0.91
CHMP1A-210ENST00000551981 TRAV8-1A0A0A6YYK1 113 aa9.33□□□□□ -0.92
CHMP1A-210ENST00000551981 DAZ4Q86SG3 579 aaKnown RBP9.33□□□□□ -0.92
CHMP1A-210ENST00000551981 Q8N3U1 123 aa9.33□□□□□ -0.92
CHMP1A-210ENST00000551981 TVP23CQ96ET8 276 aa9.33□□□□□ -0.92
CHMP1A-210ENST00000551981 DAZ3Q9NR90 486 aaKnown RBP9.33□□□□□ -0.92
CHMP1A-210ENST00000551981 OR5AC2Q9NZP5 309 aa9.33□□□□□ -0.92
CHMP1A-210ENST00000551981 A0A087WWC5 75 aa9.32□□□□□ -0.92
CHMP1A-210ENST00000551981 FAM240BA0A1B0GVZ2 78 aa9.32□□□□□ -0.92
CHMP1A-210ENST00000551981 TAAR5O14804 337 aa9.32□□□□□ -0.92
CHMP1A-210ENST00000551981 SEC11BP0C7V7 166 aa9.32□□□□□ -0.92
CHMP1A-210ENST00000551981 KRTAP10-4P60372 401 aaPredicted RBP9.32□□□□□ -0.92
CHMP1A-210ENST00000551981 LRRC37A5PQ49AS3 106 aa9.32□□□□□ -0.92
CHMP1A-210ENST00000551981 ZNF506Q5JVG8 444 aa9.32□□□□□ -0.92
CHMP1A-210ENST00000551981 SCGB1C1Q8TD33 95 aa9.32□□□□□ -0.92
CHMP1A-210ENST00000551981 PTH2Q96A98 100 aa9.32□□□□□ -0.92
CHMP1A-210ENST00000551981 C9orf85Q96MD7 179 aa9.32□□□□□ -0.92
CHMP1A-210ENST00000551981 URGCP-MRPS24S4R325 110 aa9.32□□□□□ -0.92
CHMP1A-210ENST00000551981 SERTM2A0A1B0GWG4 89 aa9.31□□□□□ -0.92
CHMP1A-210ENST00000551981 GAGE12JA6NER3 117 aa9.31□□□□□ -0.92
CHMP1A-210ENST00000551981 GAGE1Q13065 139 aa9.31□□□□□ -0.92
CHMP1A-210ENST00000551981 GAGE4Q13068 117 aa9.31□□□□□ -0.92
CHMP1A-210ENST00000551981 GAGE5Q13069 117 aa9.31□□□□□ -0.92
CHMP1A-210ENST00000551981 GAGE13Q4V321 117 aa9.31□□□□□ -0.92
CHMP1A-210ENST00000551981 PQLC2Q6ZP29 291 aa9.31□□□□□ -0.92
CHMP1A-210ENST00000551981 CIRBP-AS1Q8TBR5 109 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms