RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 ZNF439Q8NDP4 499 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 ZNF680Q8NEM1 530 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 OR10A6Q8NH74 314 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 ARL11Q969Q4 196 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 DGCR14Q96DF8 476 aaKnown RBP2.26□□□□□ -2.05
LIMA1-208ENST00000551691 OR52B2Q96RD2 323 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 PBOV1Q9GZY1 135 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 METTL1Q9UBP6 276 aaKnown RBP2.26□□□□□ -2.05
LIMA1-208ENST00000551691 PHLDA3Q9Y5J5 127 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 TMEM269A0A1B0GVZ9 245 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 UBE2L6O14933 153 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 SH2D1AO60880 128 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 GGCTO75223 188 aaKnown RBP2.25□□□□□ -2.05
LIMA1-208ENST00000551691 IGLV3-1P01715 115 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 TCRBP04435 133 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 CTSDP07339 412 aaPredicted RBP2.25□□□□□ -2.05
LIMA1-208ENST00000551691 MIFP14174 115 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 SPI1P17947 270 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 ALOX5APP20292 161 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 PPIBP23284 216 aaKnown RBP2.25□□□□□ -2.05
LIMA1-208ENST00000551691 CDC42P60953 191 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 GNG11P61952 73 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 RBX1P62877 108 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 FABP9Q0Z7S8 132 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 KRTAP13-3Q3SY46 172 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 LINC01590Q5TEZ4 76 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 GPHB5Q86YW7 130 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 FAM24BQ8N5W8 94 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 OR51T1Q8NGJ9 327 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 USMG5Q96IX5 58 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 MGLLQ99685 303 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 GNB1LQ9BYB4 327 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 TTTY10Q9BZA0 68 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 CYTL1Q9NRR1 136 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 CCDC167Q9P0B6 97 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 ZNF492Q9P255 531 aa2.25□□□□□ -2.05
LIMA1-208ENST00000551691 CARHSP1Q9Y2V2 147 aaKnown RBP2.25□□□□□ -2.05
LIMA1-208ENST00000551691 TRBV24-1A0A075B6N3 115 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 IGKV1-9A0A0C4DH69 117 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 H0YJX3 145 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 H3BMM0 161 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 H3BUA1 57 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 SLC25A20O43772 301 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 MT-CO2P00403 227 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 APOC1P02654 83 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 TTRP02766 147 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 CSN2P05814 226 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 PFN1P07737 140 aaKnown RBP2.24□□□□□ -2.05
LIMA1-208ENST00000551691 IDO1P14902 403 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 ZNF137PP52743 207 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 TAS2R45P59539 299 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 PSME3P61289 254 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 VBP1P61758 197 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 EIF4EBP1Q13541 118 aaPredicted RBP2.24□□□□□ -2.05
LIMA1-208ENST00000551691 OR2F1Q13607 317 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 RPL39P5Q59GN2 51 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 TMEM69Q5SWH9 247 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 Q6ZQT7 251 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 KRTAP11-1Q8IUC1 163 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 OR2T4Q8NH00 348 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 UBE2WQ96B02 151 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 TMEM70Q9BUB7 260 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 C6orf62Q9GZU0 229 aaPredicted RBP2.24□□□□□ -2.05
LIMA1-208ENST00000551691 V9GYS6 101 aa2.24□□□□□ -2.05
LIMA1-208ENST00000551691 KNCNA6PVL3 124 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 IGHV3-53P01767 116 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 IGKV1-16P04430 117 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 PRM2P04554 102 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 SPART-AS1P0CW21 52 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 GZMHP20718 246 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 OR10J1P30954 320 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 MAP2K4P45985 399 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 CCL18P55774 89 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 DEFB131AP59861 70 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 RAB5BP61020 215 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 SELENOWP63302 87 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 ESRGQ1W209 222 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 ZNF709Q8N972 641 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 OR2D3Q8NGH3 330 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 OR8D4Q8NGM9 314 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 ACOT12Q8WYK0 555 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 MRPS24Q96EL2 167 aaKnown RBP2.23□□□□□ -2.05
LIMA1-208ENST00000551691 BORCS8Q96FH0 119 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 TBX5Q99593 518 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 CGREF1Q99674 301 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 CMSS1Q9BQ75 279 aaKnown RBP2.23□□□□□ -2.05
LIMA1-208ENST00000551691 OR2D2Q9H210 308 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 MRPL27Q9P0M9 148 aaKnown RBP2.23□□□□□ -2.05
LIMA1-208ENST00000551691 DOK5Q9P104 306 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 PXMP4Q9Y6I8 212 aa2.23□□□□□ -2.05
LIMA1-208ENST00000551691 SYNE2Q8WXH0 6885 aaKnown RBP2.23□□□□□ -2.05
LIMA1-208ENST00000551691 OR4C46A6NHA9 309 aa2.22□□□□□ -2.05
LIMA1-208ENST00000551691 COLCA2A8K830 154 aa2.22□□□□□ -2.05
LIMA1-208ENST00000551691 A8MWP4 228 aa2.22□□□□□ -2.05
LIMA1-208ENST00000551691 A8MWP6 167 aa2.22□□□□□ -2.05
LIMA1-208ENST00000551691 SLC22A1O15245 554 aa2.22□□□□□ -2.05
LIMA1-208ENST00000551691 SAA2P0DJI9 122 aaPredicted RBP2.22□□□□□ -2.05
LIMA1-208ENST00000551691 PMAIP1Q13794 54 aa2.22□□□□□ -2.05
LIMA1-208ENST00000551691 GUK1Q16774 197 aa2.22□□□□□ -2.05
LIMA1-208ENST00000551691 PIGYQ3MUY2 71 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms