RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 CCL20P78556 96 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 PSMG4Q5JS54 123 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 LINC00322Q6ZN03 302 aaPredicted RBP4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 FOXI2Q6ZQN5 318 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 IQCF2Q8IXL9 164 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 EXOC3-AS1Q8N2X6 119 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 RNF182Q8N6D2 247 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 RXFP4Q8TDU9 374 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 LINC00052Q96N35 136 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 TXNDC17Q9BRA2 123 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 TCEAL7Q9BRU2 100 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 SAV1Q9H4B6 383 aaPredicted RBP4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 MANBALQ9NQG1 85 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 A0A0J9YX75 114 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 SERTM2A0A1B0GWG4 89 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 RBAKDNA6NC62 111 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 PGPA6NDG6 321 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 A8MTW9 85 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 EPM2AB3EWF7 344 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 GGTLC3B5MD39 225 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 M0R3E3 92 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 PAGE4O60829 102 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 SLC25A5P05141 298 aaKnown RBP4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 HLA-DRB4P13762 266 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 HLA-DMBP28068 263 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 CSN1S1P47710 185 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 APRG1Q8IVJ8 170 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 C5orf17Q8NAS9 161 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 ZNF738Q8NE65 137 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 OR8A1Q8NGG7 326 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 RPUSD4Q96CM3 377 aaKnown RBP4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 GNG13Q9P2W3 67 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 YTHDF2Q9Y5A9 579 aaKnown RBP4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 HLA-DRB4X5D2U9 266 aa4.64□□□□□ -1.67
DEPDC4-210ENST00000551642 A0A1B0GV50 99 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 ZNF705FA8MVS1 300 aaPredicted RBP4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 C16orf90A8MZG2 172 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 PRAC2D3DTV9 90 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 H3BMM0 161 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 NDUFS6O75380 124 aaKnown RBP4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 DUSP14O95147 198 aaKnown RBP4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 IFNA1P01562 189 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 BCL2P10415 239 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 UBE2G2P60604 165 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 RAB14P61106 215 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 MEF2BQ02080 365 aaPredicted RBP4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 CLLU1Q5K131 121 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 GDF5OSQ5U4N7 250 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 CST9LP1Q5W188 147 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 EBLN2Q6P2I7 272 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 TRPT1Q86TN4 253 aaKnown RBP4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 STHQ8IWL8 128 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 DEFB125Q8N687 156 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 OR10J6PQ8NGY7 276 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 CMTM2Q8TAZ6 248 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 HIST1H2BAQ96A08 127 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 WFDC10AQ9H1F0 79 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 PPP1R14DQ9NXH3 145 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 VAX2Q9UIW0 290 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 EPDR1Q9UM22 224 aa4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 KLK5Q9Y337 293 aaPredicted RBP4.63□□□□□ -1.67
DEPDC4-210ENST00000551642 RBFOX3A6NFN3 312 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 FBLL1A6NHQ2 334 aaKnown RBP4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 KNCNA6PVL3 124 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 C11orf94C9JXX5 98 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 F6UB75 175 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 F6UZH7 168 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 K7EQM0 130 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 PDE6DO43924 150 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 TCRAP04437 139 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 ATP5G3P48201 142 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 CNN1P51911 297 aaKnown RBP4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 ZNF506Q5JVG8 444 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 ACTL10Q5JWF8 245 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 MORN3Q6PF18 240 aaPredicted RBP4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 CYB561D1Q8N8Q1 229 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 C11orf52Q96A22 123 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 LINC00477Q96M19 166 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 FAM210AQ96ND0 272 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 ODF3Q96PU9 254 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 ATG101Q9BSB4 218 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 TUBA4BQ9H853 241 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 SRD5A3Q9H8P0 318 aa4.62□□□□□ -1.67
DEPDC4-210ENST00000551642 IGKV2-40A0A087WW87 121 aaPredicted RBP4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 LOC102724200A0A096LPH7 203 aaPredicted RBP4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 KIR2DL5BA0A0G2JN68 375 aa4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 KIR2DL5BA0A0G2JPC4 375 aa4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 TRBV7-9A0A0J9YWB2 115 aa4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 PEX7O00628 323 aa4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 IGKV2D-40P01614 121 aaPredicted RBP4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 S100A9P06702 114 aaKnown RBP4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 ZNF705DP0CH99 300 aaPredicted RBP4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 ZNF705BP0CI00 300 aaPredicted RBP4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 DEFB1P60022 68 aa4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 NUTF2P61970 127 aaKnown RBP4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 GNG5P63218 68 aa4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 HIST1H1AQ02539 215 aaPredicted RBP4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 TMEM78Q5T7P6 136 aa4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 SERTAD4-AS1Q5TG53 156 aa4.61□□□□□ -1.67
DEPDC4-210ENST00000551642 AMTNQ6UX39 209 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms