RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 NDUFS6O75380 124 aaKnown RBP1.3□□□□□ -2.2
PTCH1-223ENST00000551623 CDS2O95674 445 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 OR4E1P0C645 316 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 IGLC2P0DOY2 106 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 S100GP29377 79 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 INPP1P49441 399 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 TSPAN5P62079 268 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 OPCMLQ14982 345 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 SPHARQ15513 63 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 KRTAP20-1Q3LI63 56 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 Q6AWC8 147 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 LAIR2Q6ISS4 152 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 ZFP2Q6ZN57 461 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 PRSS48Q7RTY5 328 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 S100A7AQ86SG5 101 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 ZNF546Q86UE3 836 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 TMEM75Q8N9X5 138 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 Q8NBF4 154 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 INO80EQ8NBZ0 244 aaPredicted RBP1.3□□□□□ -2.2
PTCH1-223ENST00000551623 OR1S1Q8NH92 325 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 GTSF1Q8WW33 167 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 DIRC1Q969H9 104 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 UBE2WQ96B02 151 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 ZNF486Q96H40 463 aaPredicted RBP1.3□□□□□ -2.2
PTCH1-223ENST00000551623 LINC00477Q96M19 166 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 TP53RKQ96S44 253 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 PRADC1Q9BSG0 188 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 ZNF2Q9BSG1 426 aaPredicted RBP1.3□□□□□ -2.2
PTCH1-223ENST00000551623 PDCD10Q9BUL8 212 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 SAMD10Q9BYL1 202 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 CCDC90BQ9GZT6 254 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 ATG5Q9H1Y0 275 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 AUNIPQ9H7T9 357 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 SLC25A22Q9H936 323 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 ENY2Q9NPA8 101 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 ACOT13Q9NPJ3 140 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.3□□□□□ -2.2
PTCH1-223ENST00000551623 KLK12Q9UKR0 248 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 ORC6Q9Y5N6 252 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 PXMP4Q9Y6I8 212 aa1.3□□□□□ -2.2
PTCH1-223ENST00000551623 GABARAPH6UMI1 98 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 M0R2P5 195 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 SLC17A3O00476 420 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 PDCD5O14737 125 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 MYL12BO14950 172 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 CTDSPLO15194 276 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 GABARAPO95166 117 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 GZMBP10144 247 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 ZNF138P52744 262 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 AKR1C2P52895 323 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 TAS2R46P59540 309 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 SELENOTP62341 195 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 FABP5Q01469 135 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 BTN1A1Q13410 526 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 RAB31Q13636 194 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 ZNF266Q14584 549 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 DNAL1Q4LDG9 190 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 PRR9Q5T870 116 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 CFAP126Q5VTH2 177 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 TMEM182Q6ZP80 229 aaPredicted RBP1.29□□□□□ -2.2
PTCH1-223ENST00000551623 OR4C5Q8NGB2 326 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 OR10G7Q8NGN6 311 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 LINC00167Q96N53 147 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 TMEM147Q9BVK8 224 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 MND1Q9BWT6 205 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 SRRQ9GZT4 340 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 AGPAT4-IT1Q9H0P7 198 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 MIXL1Q9H2W2 232 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 MED4Q9NPJ6 270 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 SLC39A9Q9NUM3 307 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 RHBDL2Q9NX52 303 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 EHFQ9NZC4 300 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 SSR3Q9UNL2 185 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 PKIGQ9Y2B9 76 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 LENEPQ9Y5L5 61 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 URGCP-MRPS24S4R325 110 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 USH2AO75445 5202 aa1.29□□□□□ -2.2
PTCH1-223ENST00000551623 A0A087WX48 190 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 A0A096LNI7 61 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 IGHV3-16A0A0C4DH30 117 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 C3orf85A0A1B0GTC6 90 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 PGPA6NDG6 321 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 CRYM-AS1A6NIL9 109 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 FNDC10F2Z333 226 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 H3BQ15 152 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 IFNA7P01567 189 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 HLA-DQA1P01909 254 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 IGLV7-43P04211 117 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 GPX1P07203 203 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 ORM2P19652 201 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 RAB3BP20337 219 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 HLA-DMAP28067 261 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 RPS10P46783 165 aaKnown RBP1.28□□□□□ -2.2
PTCH1-223ENST00000551623 FGF8P55075 233 aaPredicted RBP1.28□□□□□ -2.2
PTCH1-223ENST00000551623 UBE2MP61081 183 aaKnown RBP1.28□□□□□ -2.2
PTCH1-223ENST00000551623 PKIAP61925 76 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 COX6A2Q02221 97 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 MLLT11Q13015 90 aaPredicted RBP1.28□□□□□ -2.2
PTCH1-223ENST00000551623 PDE6HQ13956 83 aa1.28□□□□□ -2.2
PTCH1-223ENST00000551623 TMEM183BQ1AE95 376 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms