RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 TRAV21A0A0B4J279 112 aa8.63□□□□□ -1.03
PTCH1-221ENST00000550914 IGHV3-16A0A0C4DH30 117 aa8.63□□□□□ -1.03
PTCH1-221ENST00000550914 H0YIZ8 118 aa8.63□□□□□ -1.03
PTCH1-221ENST00000550914 PSCAO43653 123 aa8.63□□□□□ -1.03
PTCH1-221ENST00000550914 CIDEAO60543 219 aa8.63□□□□□ -1.03
PTCH1-221ENST00000550914 FFAR4Q5NUL3 377 aa8.63□□□□□ -1.03
PTCH1-221ENST00000550914 FAM74A1Q5RGS3 127 aa8.63□□□□□ -1.03
PTCH1-221ENST00000550914 CMTM2Q8TAZ6 248 aa8.63□□□□□ -1.03
PTCH1-221ENST00000550914 KCNS1Q96KK3 526 aa8.63□□□□□ -1.03
PTCH1-221ENST00000550914 IBA57-AS1B1ANH7 110 aa8.62□□□□□ -1.03
PTCH1-221ENST00000550914 GNRH2O43555 120 aa8.62□□□□□ -1.03
PTCH1-221ENST00000550914 SIX6O95475 246 aa8.62□□□□□ -1.03
PTCH1-221ENST00000550914 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
PTCH1-221ENST00000550914 PFN1P07737 140 aaKnown RBP8.62□□□□□ -1.03
PTCH1-221ENST00000550914 PPT1P50897 306 aa8.62□□□□□ -1.03
PTCH1-221ENST00000550914 LRRC37A5PQ49AS3 106 aa8.62□□□□□ -1.03
PTCH1-221ENST00000550914 Q6ZSN1 163 aa8.62□□□□□ -1.03
PTCH1-221ENST00000550914 NHLRC2Q8NBF2 726 aa8.62□□□□□ -1.03
PTCH1-221ENST00000550914 SDF2L1Q9HCN8 221 aa8.62□□□□□ -1.03
PTCH1-221ENST00000550914 NAGKQ9UJ70 344 aa8.62□□□□□ -1.03
PTCH1-221ENST00000550914 TRAV8-6A0A0B4J262 113 aa8.61□□□□□ -1.03
PTCH1-221ENST00000550914 LOC100131303A0A0U1RQF7 123 aa8.61□□□□□ -1.03
PTCH1-221ENST00000550914 PGPA6NDG6 321 aa8.61□□□□□ -1.03
PTCH1-221ENST00000550914 C1QBP02746 253 aa8.61□□□□□ -1.03
PTCH1-221ENST00000550914 PQLC2Q6ZP29 291 aa8.61□□□□□ -1.03
PTCH1-221ENST00000550914 Q8N814 137 aa8.61□□□□□ -1.03
PTCH1-221ENST00000550914 HYLS1Q96M11 299 aa8.61□□□□□ -1.03
PTCH1-221ENST00000550914 MBD2Q9UBB5 411 aa8.61□□□□□ -1.03
PTCH1-221ENST00000550914 HSPB11Q9Y547 144 aa8.61□□□□□ -1.03
PTCH1-221ENST00000550914 FBLL1A6NHQ2 334 aaKnown RBP8.6□□□□□ -1.03
PTCH1-221ENST00000550914 TYMSP04818 313 aa8.6□□□□□ -1.03
PTCH1-221ENST00000550914 PET100P0DJ07 73 aa8.6□□□□□ -1.03
PTCH1-221ENST00000550914 LAGE3Q14657 143 aa8.6□□□□□ -1.03
PTCH1-221ENST00000550914 GOLT1AQ6ZVE7 132 aa8.6□□□□□ -1.03
PTCH1-221ENST00000550914 ENKURQ8TC29 256 aa8.6□□□□□ -1.03
PTCH1-221ENST00000550914 SCGB1C1Q8TD33 95 aa8.6□□□□□ -1.03
PTCH1-221ENST00000550914 PPP1R1CQ8WVI7 109 aa8.6□□□□□ -1.03
PTCH1-221ENST00000550914 S100ZQ8WXG8 99 aa8.6□□□□□ -1.03
PTCH1-221ENST00000550914 ASB13Q8WXK3 278 aa8.6□□□□□ -1.03
PTCH1-221ENST00000550914 TREM1Q9NP99 234 aa8.6□□□□□ -1.03
PTCH1-221ENST00000550914 DNAH8Q96JB1 4490 aa8.59□□□□□ -1.03
PTCH1-221ENST00000550914 TRBV6-4A0A1B0GX49 114 aa8.59□□□□□ -1.03
PTCH1-221ENST00000550914 RHOHQ15669 191 aa8.59□□□□□ -1.03
PTCH1-221ENST00000550914 SLC25A29Q8N8R3 303 aa8.59□□□□□ -1.03
PTCH1-221ENST00000550914 TVP23CQ96ET8 276 aa8.59□□□□□ -1.03
PTCH1-221ENST00000550914 PRADC1Q9BSG0 188 aa8.59□□□□□ -1.03
PTCH1-221ENST00000550914 SERTM2A0A1B0GWG4 89 aa8.58□□□□□ -1.04
PTCH1-221ENST00000550914 RS1O15537 224 aa8.58□□□□□ -1.04
PTCH1-221ENST00000550914 MPC2O95563 127 aa8.58□□□□□ -1.04
PTCH1-221ENST00000550914 H2BFSP57053 126 aa8.58□□□□□ -1.04
PTCH1-221ENST00000550914 ACOT6Q3I5F7 207 aaPredicted RBP8.58□□□□□ -1.04
PTCH1-221ENST00000550914 ZNF876PQ49A33 203 aa8.58□□□□□ -1.04
PTCH1-221ENST00000550914 OR10J3Q5JRS4 329 aa8.58□□□□□ -1.04
PTCH1-221ENST00000550914 LELP1Q5T871 98 aa8.58□□□□□ -1.04
PTCH1-221ENST00000550914 CFAP126Q5VTH2 177 aa8.58□□□□□ -1.04
PTCH1-221ENST00000550914 PTH2Q96A98 100 aa8.58□□□□□ -1.04
PTCH1-221ENST00000550914 SH3BGRL3Q9H299 93 aa8.58□□□□□ -1.04
PTCH1-221ENST00000550914 RPH3ALQ9UNE2 315 aa8.58□□□□□ -1.04
PTCH1-221ENST00000550914 TRAV8-1A0A0A6YYK1 113 aa8.57□□□□□ -1.04
PTCH1-221ENST00000550914 A0A1W2PPV4 95 aa8.57□□□□□ -1.04
PTCH1-221ENST00000550914 F6UZH7 168 aa8.57□□□□□ -1.04
PTCH1-221ENST00000550914 RPL12P30050 165 aaKnown RBP8.57□□□□□ -1.04
PTCH1-221ENST00000550914 NDFIP1Q9BT67 221 aa8.57□□□□□ -1.04
PTCH1-221ENST00000550914 TM2D2Q9BX73 214 aa8.57□□□□□ -1.04
PTCH1-221ENST00000550914 GTSF1LQ9H1H1 148 aa8.57□□□□□ -1.04
PTCH1-221ENST00000550914 Q9HAA7 133 aa8.57□□□□□ -1.04
PTCH1-221ENST00000550914 INMT-MINDY4F8WBC2 141 aa8.56□□□□□ -1.04
PTCH1-221ENST00000550914 TAAR5O14804 337 aa8.56□□□□□ -1.04
PTCH1-221ENST00000550914 MGST1P10620 155 aaKnown RBP8.56□□□□□ -1.04
PTCH1-221ENST00000550914 HAMPP81172 84 aa8.56□□□□□ -1.04
PTCH1-221ENST00000550914 C9orf85Q96MD7 179 aa8.56□□□□□ -1.04
PTCH1-221ENST00000550914 UPK1BO75841 260 aa8.55□□□□□ -1.04
PTCH1-221ENST00000550914 DPPA3Q6W0C5 159 aa8.55□□□□□ -1.04
PTCH1-221ENST00000550914 Q6ZSA8 131 aa8.55□□□□□ -1.04
PTCH1-221ENST00000550914 ATP6V0E2Q8NHE4 81 aa8.55□□□□□ -1.04
PTCH1-221ENST00000550914 MARVELD1Q9BSK0 173 aa8.55□□□□□ -1.04
PTCH1-221ENST00000550914 SMIM3Q9BZL3 60 aa8.55□□□□□ -1.04
PTCH1-221ENST00000550914 K7EQM0 130 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 IGHV3-30P01768 117 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 IGHV3-33P01772 117 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 IGHV3-30-3P0DP02 117 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 IGHV3-30-5P0DP03 117 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 RAB2AP61019 212 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 GNG5P63218 68 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 PIK3CD-AS1Q5SR53 167 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 C5orf17Q8NAS9 161 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 OR10G9Q8NGN4 311 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 OR10G7Q8NGN6 311 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 SUN5Q8TC36 379 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 FAM30AQ9NZY2 134 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 C11orf21Q9P2W6 132 aa8.54□□□□□ -1.04
PTCH1-221ENST00000550914 TRAV8-3A0A0A6YYJ7 113 aa8.53□□□□□ -1.04
PTCH1-221ENST00000550914 J3QL48 77 aa8.53□□□□□ -1.04
PTCH1-221ENST00000550914 SSNA1O43805 119 aa8.53□□□□□ -1.04
PTCH1-221ENST00000550914 EIF3GO75821 320 aaKnown RBP eCLIP8.53□□□□□ -1.04
PTCH1-221ENST00000550914 GCGP01275 180 aa8.53□□□□□ -1.04
PTCH1-221ENST00000550914 PLA2G1BP04054 148 aaKnown RBP8.53□□□□□ -1.04
PTCH1-221ENST00000550914 TCRAP04437 139 aa8.53□□□□□ -1.04
PTCH1-221ENST00000550914 ARL14EPLP0DKL9 152 aa8.53□□□□□ -1.04
PTCH1-221ENST00000550914 ZNF80P51504 273 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms