RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 OR5C1Q8NGR4 320 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 Q8TAT8 98 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 S100ZQ8WXG8 99 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 NARS2Q96I59 477 aaKnown RBP3.32□□□□□ -1.88
SCAF11-214ENST00000550893 GPR82Q96P67 336 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 ODF3Q96PU9 254 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 AGPAT4-IT1Q9H0P7 198 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 TP53TG3Q9ULZ0 132 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 HSPB11Q9Y547 144 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 IGHV3OR16-12A0A075B7B8 117 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 PIGBOS1A0A0B4J2F0 54 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 C5orf51A6NDU8 294 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 SMIM9A6NGZ8 99 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 CENPXA8MT69 81 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 C11orf94C9JXX5 98 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 COX7A2P2O60397 106 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 SCGB2A1O75556 95 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 INSP01308 110 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 FABP1P07148 127 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 EMP1P54849 157 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 RAB2AP61019 212 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 RIGQ13278 110 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 CLINT1Q14677 625 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 ZNF726P1Q15940 193 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 LRRC37A5PQ49AS3 106 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 C10orf113Q5VZT2 155 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 Q6ZRN7 208 aaPredicted RBP3.31□□□□□ -1.88
SCAF11-214ENST00000550893 POM121L12Q8N7R1 296 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 ZNRF2Q8NHG8 242 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 SUN5Q8TC36 379 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 VSIG2Q96IQ7 327 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 SLC50A1Q9BRV3 221 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 NIPSNAP3BQ9BS92 247 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 GPN1Q9HCN4 374 aaPredicted RBP3.31□□□□□ -1.88
SCAF11-214ENST00000550893 DNAJC4Q9NNZ3 241 aa3.31□□□□□ -1.88
SCAF11-214ENST00000550893 LRP1Q07954 4544 aaKnown RBP3.31□□□□□ -1.88
SCAF11-214ENST00000550893 PRAF2O60831 178 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 OR10J4P0C629 311 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 HIST1H1EP10412 219 aaKnown RBP3.3□□□□□ -1.88
SCAF11-214ENST00000550893 S100A11P31949 105 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 ID1P41134 155 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 CDKN1BP46527 198 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 INPP1P49441 399 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 TCTAP57738 103 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 BAXQ07812 192 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 FGL1Q08830 312 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 PDE6HQ13956 83 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 Q6ZTI0 123 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 BPIFA4PQ86YQ2 179 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 ENKURQ8TC29 256 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 TMEM263Q8WUH6 116 aaKnown RBP3.3□□□□□ -1.88
SCAF11-214ENST00000550893 RASL10AQ92737 203 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 PPP1R14BQ96C90 147 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 MRPL53Q96EL3 112 aaKnown RBP3.3□□□□□ -1.88
SCAF11-214ENST00000550893 ATP5SQ99766 215 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 LINC00467Q9BRT7 94 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 SMIM3Q9BZL3 60 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 SH3BGRL3Q9H299 93 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 LINC00588Q9Y4M8 146 aa3.3□□□□□ -1.88
SCAF11-214ENST00000550893 TRAV8-1A0A0A6YYK1 113 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 TRAV12-3A0A0B4J271 114 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 LYRM9A8MSI8 78 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 SNURFLB1AK76 121 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 GGTLC3B5MD39 225 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 E5RGE8 158 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 L7N2F9 121 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 DUSP14O95147 198 aaKnown RBP3.29□□□□□ -1.88
SCAF11-214ENST00000550893 HBE1P02100 147 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 SPART-AS1P0CW21 52 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 ZNF80P51504 273 aaPredicted RBP3.29□□□□□ -1.88
SCAF11-214ENST00000550893 BCAP31P51572 246 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 XGP55808 180 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 TAS2R60P59551 318 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 RRN3P1Q2M238 152 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 SAMD13Q5VXD3 122 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 EBLN2Q6P2I7 272 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 C18orf15Q96N68 181 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 AQP10Q96PS8 301 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 CYTL1Q9NRR1 136 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 ZNF492Q9P255 531 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 FUT9Q9Y231 359 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 GOLT1BQ9Y3E0 138 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 KLF12Q9Y4X4 402 aa3.29□□□□□ -1.88
SCAF11-214ENST00000550893 SRRM2Q9UQ35 2752 aaKnown RBP3.29□□□□□ -1.88
SCAF11-214ENST00000550893 IGLV2-18A0A075B6J9 118 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 A0A096LPF7 62 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 A0A1W2PPQ1 181 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 C7orf71A4D174 169 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 TMEM189A5PLL7 270 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 SPINK4O60575 86 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 MPDU1O75352 247 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 PTTG1O95997 202 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 RPL12P30050 165 aaKnown RBP3.28□□□□□ -1.88
SCAF11-214ENST00000550893 TCL1AP56279 114 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 NUTF2P61970 127 aaKnown RBP3.28□□□□□ -1.88
SCAF11-214ENST00000550893 GNG5P63218 68 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 DAZ2Q13117 558 aaKnown RBP3.28□□□□□ -1.88
SCAF11-214ENST00000550893 ATP6V1FQ16864 119 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms