RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 STAG3L2P0CL84 134 aa7.46□□□□□ -1.22
VTI1BP3-201ENST00000550220 STAG3L3P0CL85 134 aa7.46□□□□□ -1.22
VTI1BP3-201ENST00000550220 C5orf17Q8NAS9 161 aa7.46□□□□□ -1.22
VTI1BP3-201ENST00000550220 AQP10Q96PS8 301 aa7.46□□□□□ -1.22
VTI1BP3-201ENST00000550220 PGPEP1Q9NXJ5 209 aa7.46□□□□□ -1.22
VTI1BP3-201ENST00000550220 NAGKQ9UJ70 344 aa7.46□□□□□ -1.22
VTI1BP3-201ENST00000550220 RPH3ALQ9UNE2 315 aa7.46□□□□□ -1.22
VTI1BP3-201ENST00000550220 TNFSF18Q9UNG2 199 aa7.46□□□□□ -1.22
VTI1BP3-201ENST00000550220 LY96Q9Y6Y9 160 aa7.46□□□□□ -1.22
VTI1BP3-201ENST00000550220 IGHV3-16A0A0C4DH30 117 aa7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 K7EQD1 137 aa7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 TAAR5O14804 337 aa7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 CXorf1O96002 111 aa7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 ARL14EPLP0DKL9 152 aa7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 GYPEP15421 78 aa7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 EVI2AP22794 236 aa7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 LINC00315P59091 139 aa7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 SAPCD1Q5SSQ6 148 aa7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 HSD17B11Q8NBQ5 300 aa7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 INO80EQ8NBZ0 244 aaPredicted RBP7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 SUN5Q8TC36 379 aa7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 RAB24Q969Q5 203 aa7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 ZNF479Q96JC4 524 aa7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 ACTR3CQ9C0K3 210 aaPredicted RBP7.45□□□□□ -1.22
VTI1BP3-201ENST00000550220 BORCS7-ASMTA0A0B4J1R7 106 aa7.44□□□□□ -1.22
VTI1BP3-201ENST00000550220 GNRH2O43555 120 aa7.44□□□□□ -1.22
VTI1BP3-201ENST00000550220 TCRAP04437 139 aa7.44□□□□□ -1.22
VTI1BP3-201ENST00000550220 SFTA3P0C7M3 94 aa7.44□□□□□ -1.22
VTI1BP3-201ENST00000550220 GCHFRP30047 84 aa7.44□□□□□ -1.22
VTI1BP3-201ENST00000550220 ZFP69Q49AA0 526 aa7.44□□□□□ -1.22
VTI1BP3-201ENST00000550220 CDPF1Q6NVV7 123 aa7.44□□□□□ -1.22
VTI1BP3-201ENST00000550220 C10orf126Q8N4M7 172 aa7.44□□□□□ -1.22
VTI1BP3-201ENST00000550220 TRAV8-1A0A0A6YYK1 113 aa7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 HMGB3O15347 200 aaKnown RBP7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 EIF3GO75821 320 aaKnown RBP eCLIP7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 TYMSP04818 313 aa7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 PFN1P07737 140 aaKnown RBP7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 GIPP09681 153 aaPredicted RBP7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 ATP6V0CP27449 155 aa7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 TIRAPP58753 221 aa7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 ERVFC1-1P60608 527 aa7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 PTH2Q96A98 100 aa7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 TVP23CQ96ET8 276 aa7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 NKX6-2Q9C056 277 aaPredicted RBP7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 SH3BGRL3Q9H299 93 aa7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 EPDR1Q9UM22 224 aa7.43□□□□□ -1.22
VTI1BP3-201ENST00000550220 A0A1W2PRE2 83 aa7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 F6UZH7 168 aa7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 DNAH10OSP0CZ25 163 aa7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 SUMO1P63165 101 aaKnown RBP7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 GNG5P63218 68 aa7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 FLI1Q01543 452 aaPredicted RBP7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 ZNF876PQ49A33 203 aa7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 SMUG1Q53HV7 270 aa7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 Q6ZRN7 208 aaPredicted RBP7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 MAPKAPK5-AS1Q8N8E1 139 aa7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 CYB561D1Q8N8Q1 229 aa7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 TMEM75Q8N9X5 138 aa7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 PRADC1Q9BSG0 188 aa7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 PSG8Q9UQ74 426 aa7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 RYR1P21817 5038 aa7.42□□□□□ -1.22
VTI1BP3-201ENST00000550220 PCLOQ9Y6V0 5065 aa7.41□□□□□ -1.22
VTI1BP3-201ENST00000550220 TRBV6-4A0A1B0GX49 114 aa7.41□□□□□ -1.22
VTI1BP3-201ENST00000550220 GATA1P15976 413 aaPredicted RBP7.41□□□□□ -1.22
VTI1BP3-201ENST00000550220 PPT1P50897 306 aa7.41□□□□□ -1.22
VTI1BP3-201ENST00000550220 MSRB1Q9NZV6 116 aa7.41□□□□□ -1.22
VTI1BP3-201ENST00000550220 TRAV8-6A0A0B4J262 113 aa7.4□□□□□ -1.22
VTI1BP3-201ENST00000550220 GCGP01275 180 aa7.4□□□□□ -1.22
VTI1BP3-201ENST00000550220 KRTAP10-2P60368 255 aa7.4□□□□□ -1.22
VTI1BP3-201ENST00000550220 RHOHQ15669 191 aa7.4□□□□□ -1.22
VTI1BP3-201ENST00000550220 PIK3CD-AS1Q5SR53 167 aa7.4□□□□□ -1.22
VTI1BP3-201ENST00000550220 PRNTQ86SH4 94 aa7.4□□□□□ -1.22
VTI1BP3-201ENST00000550220 Q8N1X5 172 aa7.4□□□□□ -1.22
VTI1BP3-201ENST00000550220 NHLRC2Q8NBF2 726 aa7.4□□□□□ -1.22
VTI1BP3-201ENST00000550220 SGK494Q96LW2 274 aa7.4□□□□□ -1.22
VTI1BP3-201ENST00000550220 LRP1BQ9NZR2 4599 aa7.39□□□□□ -1.23
VTI1BP3-201ENST00000550220 CTXND1A0A1B0GTU2 59 aa7.39□□□□□ -1.23
VTI1BP3-201ENST00000550220 FABP5P3A8MUU1 101 aa7.39□□□□□ -1.23
VTI1BP3-201ENST00000550220 RS1O15537 224 aa7.39□□□□□ -1.23
VTI1BP3-201ENST00000550220 IFNA7P01567 189 aa7.39□□□□□ -1.23
VTI1BP3-201ENST00000550220 IGLV2-11P01706 119 aa7.39□□□□□ -1.23
VTI1BP3-201ENST00000550220 CRYGDP07320 174 aa7.39□□□□□ -1.23
VTI1BP3-201ENST00000550220 MGST1P10620 155 aaKnown RBP7.39□□□□□ -1.23
VTI1BP3-201ENST00000550220 AKR1C8PQ5T2L2 129 aa7.39□□□□□ -1.23
VTI1BP3-201ENST00000550220 CFAP126Q5VTH2 177 aa7.39□□□□□ -1.23
VTI1BP3-201ENST00000550220 WFDC10BQ8IUB3 73 aa7.39□□□□□ -1.23
VTI1BP3-201ENST00000550220 HIST1H2BAQ96A08 127 aa7.39□□□□□ -1.23
VTI1BP3-201ENST00000550220 C9orf85Q96MD7 179 aa7.39□□□□□ -1.23
VTI1BP3-201ENST00000550220 FXYD6-FXYD2A0A087WZ82 144 aa7.38□□□□□ -1.23
VTI1BP3-201ENST00000550220 IGHV3-38A0A0C4DH36 116 aa7.38□□□□□ -1.23
VTI1BP3-201ENST00000550220 A8MWV9 139 aa7.38□□□□□ -1.23
VTI1BP3-201ENST00000550220 GGTLC3B5MD39 225 aa7.38□□□□□ -1.23
VTI1BP3-201ENST00000550220 S100A4P26447 101 aaKnown RBP7.38□□□□□ -1.23
VTI1BP3-201ENST00000550220 ZNF80P51504 273 aaPredicted RBP7.38□□□□□ -1.23
VTI1BP3-201ENST00000550220 Q5BKY6 102 aa7.38□□□□□ -1.23
VTI1BP3-201ENST00000550220 RPL7L1Q6DKI1 246 aaKnown RBP7.38□□□□□ -1.23
VTI1BP3-201ENST00000550220 SLC25A29Q8N8R3 303 aa7.38□□□□□ -1.23
VTI1BP3-201ENST00000550220 OR2T35Q8NGX2 323 aa7.38□□□□□ -1.23
VTI1BP3-201ENST00000550220 TCEAL7Q9BRU2 100 aa7.38□□□□□ -1.23
VTI1BP3-201ENST00000550220 A0A087WTM6 91 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms