RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 PEMTQ9UBM1 199 aa6.75□□□□□ -1.33
TMEM116-209ENST00000550020 ASPMQ8IZT6 3477 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 ADGRG4Q8IZF6 3080 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 SPENQ96T58 3664 aaKnown RBP6.74□□□□□ -1.33
TMEM116-209ENST00000550020 IGKV3-7A0A075B6H7 116 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.74□□□□□ -1.33
TMEM116-209ENST00000550020 J3KRW8 73 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 K7EQG2 157 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 HOXA3O43365 443 aaPredicted RBP6.74□□□□□ -1.33
TMEM116-209ENST00000550020 DPM2O94777 84 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 NXPH4O95158 308 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 PRB1P04280 392 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 RPL32P62910 135 aaKnown RBP6.74□□□□□ -1.33
TMEM116-209ENST00000550020 SEC11AP67812 179 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 KIR3DS1Q14943 382 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 PRR9Q5T870 116 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 LCNL1Q6ZST4 164 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 NRACQ8N912 160 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 WFDC12Q8WWY7 111 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 TMEM158Q8WZ71 300 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 TMEM208Q9BTX3 173 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 ATRXP46100 2492 aa6.74□□□□□ -1.33
TMEM116-209ENST00000550020 IGLV2-18A0A075B6J9 118 aa6.73□□□□□ -1.33
TMEM116-209ENST00000550020 A0A0J9YX75 114 aa6.73□□□□□ -1.33
TMEM116-209ENST00000550020 NUDT3O95989 172 aa6.73□□□□□ -1.33
TMEM116-209ENST00000550020 IGKCP01834 107 aa6.73□□□□□ -1.33
TMEM116-209ENST00000550020 HLA-DRB4P13762 266 aa6.73□□□□□ -1.33
TMEM116-209ENST00000550020 PLNP26678 52 aa6.73□□□□□ -1.33
TMEM116-209ENST00000550020 SUMO2P61956 95 aaKnown RBP6.73□□□□□ -1.33
TMEM116-209ENST00000550020 SCGB2A2Q13296 93 aa6.73□□□□□ -1.33
TMEM116-209ENST00000550020 TMEM95Q3KNT9 176 aa6.73□□□□□ -1.33
TMEM116-209ENST00000550020 TMEM97Q5BJF2 176 aa6.73□□□□□ -1.33
TMEM116-209ENST00000550020 FOXI2Q6ZQN5 318 aa6.73□□□□□ -1.33
TMEM116-209ENST00000550020 WFDC3Q8IUB2 231 aa6.73□□□□□ -1.33
TMEM116-209ENST00000550020 STPG4Q8N801 248 aa6.73□□□□□ -1.33
TMEM116-209ENST00000550020 HLA-DRB4X5D2U9 266 aa6.73□□□□□ -1.33
TMEM116-209ENST00000550020 TRGV11A0A075B6L2 103 aa6.72□□□□□ -1.33
TMEM116-209ENST00000550020 TRAV12-1A0A0B4J245 112 aa6.72□□□□□ -1.33
TMEM116-209ENST00000550020 A6NDN8 102 aa6.72□□□□□ -1.33
TMEM116-209ENST00000550020 F6UB75 175 aa6.72□□□□□ -1.33
TMEM116-209ENST00000550020 LINC01619G3V211 115 aa6.72□□□□□ -1.33
TMEM116-209ENST00000550020 CD5LO43866 347 aa6.72□□□□□ -1.33
TMEM116-209ENST00000550020 MGPP08493 103 aa6.72□□□□□ -1.33
TMEM116-209ENST00000550020 HOXD3P31249 432 aaPredicted RBP6.72□□□□□ -1.33
TMEM116-209ENST00000550020 CDKN1BP46527 198 aa6.72□□□□□ -1.33
TMEM116-209ENST00000550020 SYNJ2BPP57105 145 aa6.72□□□□□ -1.33
TMEM116-209ENST00000550020 POM121L12Q8N7R1 296 aa6.72□□□□□ -1.33
TMEM116-209ENST00000550020 Q96MF0 132 aa6.72□□□□□ -1.33
TMEM116-209ENST00000550020 C18orf15Q96N68 181 aa6.72□□□□□ -1.33
TMEM116-209ENST00000550020 BBC3Q96PG8 261 aaPredicted RBP6.72□□□□□ -1.33
TMEM116-209ENST00000550020 COX11Q9Y6N1 276 aa6.72□□□□□ -1.33
TMEM116-209ENST00000550020 IGHV4OR15-8A0A075B7B6 117 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 A0A087WW49 117 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 CD7P09564 240 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 ZNF688P0C7X2 276 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 RNASE3P12724 160 aaKnown RBP6.71□□□□□ -1.34
TMEM116-209ENST00000550020 SRD5A1P18405 259 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 HSD52Q0P140 79 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 ODF1Q14990 250 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 MPV17L2Q567V2 206 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 BVES-AS1Q5T3Y7 98 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 BOD1L2Q8IYS8 172 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 C14orf178Q8N769 122 aaPredicted RBP6.71□□□□□ -1.34
TMEM116-209ENST00000550020 C4orf3Q8WVX3 66 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 FOXC2Q99958 501 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 MCRIP2Q9BUT9 160 aaKnown RBP6.71□□□□□ -1.34
TMEM116-209ENST00000550020 ZMAT4Q9H898 229 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 NCOR2Q9Y618 2525 aa6.71□□□□□ -1.34
TMEM116-209ENST00000550020 BSNQ9UPA5 3926 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 IGHV1OR15-1A0A075B7D0 117 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 A0A087WX48 190 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 TRAV12-3A0A0B4J271 114 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 H7C1H1 209 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 VCYO14598 125 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 GNRH2O43555 120 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 GATA1P15976 413 aaPredicted RBP6.7□□□□□ -1.34
TMEM116-209ENST00000550020 TFPI2P48307 235 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 TCTEX1D4Q5JR98 221 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 PAPPA-AS1Q5QFB9 102 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 TOMM6Q96B49 74 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 DUX5Q96PT3 197 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 SCGB3A1Q96QR1 104 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 KIR2DL4Q99706 377 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 ABCA1O95477 2261 aa6.7□□□□□ -1.34
TMEM116-209ENST00000550020 DCHS1Q96JQ0 3298 aa6.69□□□□□ -1.34
TMEM116-209ENST00000550020 TRAV26-2A0A0B4J265 109 aa6.69□□□□□ -1.34
TMEM116-209ENST00000550020 KALRNO60229 2985 aa6.69□□□□□ -1.34
TMEM116-209ENST00000550020 NMUP48645 174 aa6.69□□□□□ -1.34
TMEM116-209ENST00000550020 FXYD7P58549 80 aa6.69□□□□□ -1.34
TMEM116-209ENST00000550020 ANKRD39Q53RE8 183 aa6.69□□□□□ -1.34
TMEM116-209ENST00000550020 MAPK1IP1LQ8NDC0 245 aa6.69□□□□□ -1.34
TMEM116-209ENST00000550020 DYNLRB2Q8TF09 96 aa6.69□□□□□ -1.34
TMEM116-209ENST00000550020 RASL10AQ92737 203 aa6.69□□□□□ -1.34
TMEM116-209ENST00000550020 C9orf85Q96MD7 179 aa6.69□□□□□ -1.34
TMEM116-209ENST00000550020 HIGD1BQ9P298 99 aa6.69□□□□□ -1.34
TMEM116-209ENST00000550020 SPTBN1Q01082 2364 aaKnown RBP6.69□□□□□ -1.34
TMEM116-209ENST00000550020 HRNRQ86YZ3 2850 aaPredicted RBP6.69□□□□□ -1.34
TMEM116-209ENST00000550020 CACNA1AO00555 2505 aa6.69□□□□□ -1.34
TMEM116-209ENST00000550020 NBASA2RRP1 2371 aa6.68□□□□□ -1.34
TMEM116-209ENST00000550020 TRAV25A0A0B4J276 109 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms