RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 LINC00205P59089 165 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 ZFP82Q8N141 532 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 Q8NAQ8 132 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 IGKV3D-20A0A0C4DH25 116 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 LOC105371267A0A1B0GV96 52 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 A8MWV9 139 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 SLC17A3O00476 420 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 TIMM17BO60830 172 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 C10orf55Q5SWW7 151 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 ZC2HC1AQ96GY0 325 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 AGPAT4-IT1Q9H0P7 198 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 MDFICQ9P1T7 246 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 TNXBP22105 4242 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 AGRNO00468 2067 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 SRIP30626 198 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 S100A10P60903 97 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 BLCAPP62952 87 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 POLEQ07864 2286 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 FOXI1Q12951 378 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 LAGE3Q14657 143 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 UNQ9165/PRO28630Q6UXU0 137 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 Q8N976 141 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 GTSF1Q8WW33 167 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 VPS13AQ96RL7 3174 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 SEC16AO15027 2179 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 C7orf77A4D0Y5 90 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 GATA1P15976 413 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-212ENST00000549162 OR8I2Q8N0Y5 310 aa3.48□□□□□ -1.85
SCAF11-212ENST00000549162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.48□□□□□ -1.85
SCAF11-212ENST00000549162 GVINP1Q7Z2Y8 2422 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 F8W036 122 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 FAM104BQ5XKR9 115 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 LGALS9CQ6DKI2 356 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 B9D2Q9BPU9 175 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 CSTL1Q9H114 145 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 NACAE9PAV3 2078 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 FAT3Q8TDW7 4589 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 SNURFLB1AK76 121 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 CST7O76096 145 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 COX7A1P24310 79 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 EMP1P54849 157 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 KRTAP24-1Q3LI83 254 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 OR2B11Q5JQS5 317 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 RHPN1-AS1Q9BWJ2 59 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 C11orf21Q9P2W6 132 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 CEP290O15078 2479 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 RPEL1Q2QD12 228 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 CENPWQ5EE01 88 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 FAM78BQ5VT40 261 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 URB1-AS1Q96HZ7 61 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 TMEM141Q96I45 108 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 MAP1LC3CQ9BXW4 147 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 PRR34Q9NV39 138 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 DNAJC13O75165 2243 aa3.47□□□□□ -1.85
SCAF11-212ENST00000549162 CFAP47Q6ZTR5 3102 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 IGLV5-37A0A075B6J1 123 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 LOC102724200A0A096LPH7 203 aaPredicted RBP3.46□□□□□ -1.86
SCAF11-212ENST00000549162 IGHV3-66A0A0C4DH42 116 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 IL4P05112 153 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 GZMBP10144 247 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 SNRPD3P62318 126 aaKnown RBP3.46□□□□□ -1.86
SCAF11-212ENST00000549162 UBE2L3P68036 154 aaKnown RBP3.46□□□□□ -1.86
SCAF11-212ENST00000549162 AKR1C1Q04828 323 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 SMAGPQ0VAQ4 97 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 C1orf158Q8N1D5 194 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 SCO2A0A1W2PP80 73 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 RAB5AP20339 215 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 TMEM219Q86XT9 240 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 Q8N8P6 123 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 TOMM6Q96B49 74 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 ZNF469Q96JG9 3925 aaPredicted RBP3.46□□□□□ -1.86
SCAF11-212ENST00000549162 SH2D1AO60880 128 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 ATP5LO75964 103 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 LY6HO94772 140 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 CRYGDP07320 174 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 CD28P10747 220 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 ATP5G3P48201 142 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 APOC4P55056 127 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 FGF8P55075 233 aaPredicted RBP3.46□□□□□ -1.86
SCAF11-212ENST00000549162 UBE2G1P62253 170 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 VAMP3Q15836 100 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 IQCJQ1A5X6 159 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 PRNTQ86SH4 94 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 HSD17B11Q8NBQ5 300 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 SPEGQ15772 3267 aa3.46□□□□□ -1.86
SCAF11-212ENST00000549162 IGHV4-28A0A0C4DH34 117 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 M0R2P5 195 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 TLX1NBP0CAT3 122 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 IGLC3P0DOY3 106 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 AKR1C3P42330 323 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 XGP55808 180 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 KRTAP26-1Q6PEX3 210 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 ALKAL2Q6UX46 152 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 TEX43Q6ZNM6 134 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 OR5A1Q8NGJ0 315 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 FAM213BQ8TBF2 198 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 G3V318 75 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 CSN1S1P47710 185 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 GNG4P50150 75 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 DLX1P56177 255 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms