RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 SCN10AQ9Y5Y9 1956 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 AKAP6Q13023 2319 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 TANC1Q9C0D5 1861 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 PKDREJQ9NTG1 2253 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 MUC4Q99102 2169 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 ROBO3Q96MS0 1386 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 J3QRK9 145 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 NUPR1O60356 82 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 ZNF682O95780 498 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 IGLV3-1P01715 115 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 SERPINE1P05121 402 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 OMPP47874 163 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 AP3S2P59780 193 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 EIF5AP63241 154 aaKnown RBP0.22□□□□□ -2.37
CCDC38-206ENST00000548771 PLPP5Q8NEB5 264 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 DEFB124Q8NES8 71 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 SLC30A7Q8NEW0 376 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 SLC25A40Q8TBP6 338 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 ADAT3Q96EY9 351 aaPredicted RBP0.22□□□□□ -2.37
CCDC38-206ENST00000548771 PRADC1Q9BSG0 188 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 TVP23BQ9NYZ1 205 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 ORMDL1Q9P0S3 153 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 TNFSF18Q9UNG2 199 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 CHCHD2Q9Y6H1 151 aaPredicted RBP0.22□□□□□ -2.37
CCDC38-206ENST00000548771 CDK5RAP2Q96SN8 1893 aa0.22□□□□□ -2.37
CCDC38-206ENST00000548771 ZNF106Q9H2Y7 1883 aaKnown RBP0.22□□□□□ -2.37
CCDC38-206ENST00000548771 FLGP20930 4061 aaPredicted RBP0.22□□□□□ -2.37
CCDC38-206ENST00000548771 KNL1Q8NG31 2342 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 ROCK1Q13464 1354 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 CCNB3Q8WWL7 1395 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 HELZP42694 1942 aaKnown RBP0.21□□□□□ -2.38
CCDC38-206ENST00000548771 hADV38S2A0JD32 116 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 CYBAP13498 195 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 SRP14P37108 136 aaKnown RBP0.21□□□□□ -2.38
CCDC38-206ENST00000548771 DEFA3P59666 94 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 DYNLT1P63172 113 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 IAH1Q2TAA2 248 aaPredicted RBP0.21□□□□□ -2.38
CCDC38-206ENST00000548771 C12orf74Q32Q52 190 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 SPINK9Q5DT21 86 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 KRTAP26-1Q6PEX3 210 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 Q6Q795 121 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 C2orf82Q6UX34 121 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 TRAPPC5Q8IUR0 188 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 OR11H6Q8NGC7 330 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 OR52L1Q8NGH7 329 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 CCDC42Q96M95 316 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 TP53RKQ96S44 253 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 UQCC1Q9NVA1 299 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 PSME4Q14997 1843 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 SIPA1L3O60292 1781 aaPredicted RBP0.21□□□□□ -2.38
CCDC38-206ENST00000548771 ABCA4P78363 2273 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 DAPK1P53355 1430 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 PTPRFP10586 1907 aa0.21□□□□□ -2.38
CCDC38-206ENST00000548771 PLCE1Q9P212 2302 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 ABCA1O95477 2261 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 GOLGA4Q13439 2230 aaKnown RBP0.2□□□□□ -2.38
CCDC38-206ENST00000548771 A0A087WUJ7 227 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 IGLV3-32A0A0A0MS00 114 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 LCE6AA0A183 80 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 TIMM17BO60830 172 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 CD2P06729 351 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 C8GP07360 202 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 IMPG1Q17R60 797 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 LYRM7Q5U5X0 104 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 Q8IYB0 196 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 C12orf45Q8N5I9 185 aaPredicted RBP0.2□□□□□ -2.38
CCDC38-206ENST00000548771 RNASE7Q9H1E1 156 aaKnown RBP0.2□□□□□ -2.38
CCDC38-206ENST00000548771 PSTPIP2Q9H939 334 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 NOSIPQ9Y314 301 aaKnown RBP0.2□□□□□ -2.38
CCDC38-206ENST00000548771 ZGRF1Q86YA3 2104 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 NUP98P52948 1817 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 DOCK2Q92608 1830 aa0.2□□□□□ -2.38
CCDC38-206ENST00000548771 ANKRD30AQ9BXX3 1397 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 UBR2Q8IWV8 1755 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 KIAA1549Q9HCM3 1950 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 PLXND1Q9Y4D7 1925 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 OBSL1O75147 1896 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 M0R378 163 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 PDE6DO43924 150 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 KRTAP2-3P0C7H8 128 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 ASIPP42127 132 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 HAGHLQ6PII5 290 aaPredicted RBP0.19□□□□□ -2.38
CCDC38-206ENST00000548771 LINC00575Q6W349 94 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 TEN1Q86WV5 123 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 LINC00052Q96N35 136 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 KRTAP2-4Q9BYR9 128 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 F5P12259 2224 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 USF3Q68DE3 2245 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 CHD3Q12873 2000 aaKnown RBP0.19□□□□□ -2.38
CCDC38-206ENST00000548771 ZNF236Q9UL36 1845 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 PTPRDP23468 1912 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 MYLKQ15746 1914 aa0.19□□□□□ -2.38
CCDC38-206ENST00000548771 WNK2Q9Y3S1 2297 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 KNTC1P50748 2209 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 CACNA1CQ13936 2221 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 PARP14Q460N5 1801 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 TRGV10A0A0A0MS01 117 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 C5orf67F2Z3F1 127 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 F8W1H4 67 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 H3BRM9 83 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms