RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 TYMSP04818 313 aa11.8□□□□□ -0.52
CHMP1A-205ENST00000548650 DNAH10OSP0CZ25 163 aa11.8□□□□□ -0.52
CHMP1A-205ENST00000548650 FUSP35637 526 aaKnown RBP eCLIP11.8□□□□□ -0.52
CHMP1A-205ENST00000548650 NFE4Q86UQ8 179 aa11.8□□□□□ -0.52
CHMP1A-205ENST00000548650 A0A1W2PPV4 95 aa11.79□□□□□ -0.52
CHMP1A-205ENST00000548650 C9JCJ5 164 aa11.79□□□□□ -0.52
CHMP1A-205ENST00000548650 M0R2P5 195 aa11.79□□□□□ -0.52
CHMP1A-205ENST00000548650 HMGB3O15347 200 aaKnown RBP11.79□□□□□ -0.52
CHMP1A-205ENST00000548650 GNRH2O43555 120 aa11.79□□□□□ -0.52
CHMP1A-205ENST00000548650 ARL14EPLP0DKL9 152 aa11.79□□□□□ -0.52
CHMP1A-205ENST00000548650 TREM1Q9NP99 234 aa11.79□□□□□ -0.52
CHMP1A-205ENST00000548650 LOC100131303A0A0U1RQF7 123 aa11.78□□□□□ -0.52
CHMP1A-205ENST00000548650 CDPF1Q6NVV7 123 aa11.78□□□□□ -0.52
CHMP1A-205ENST00000548650 OR4C5Q8NGB2 326 aa11.78□□□□□ -0.52
CHMP1A-205ENST00000548650 OR10G9Q8NGN4 311 aa11.78□□□□□ -0.52
CHMP1A-205ENST00000548650 OR10G7Q8NGN6 311 aa11.78□□□□□ -0.52
CHMP1A-205ENST00000548650 TXNDC17Q9BRA2 123 aa11.78□□□□□ -0.52
CHMP1A-205ENST00000548650 SDF2L1Q9HCN8 221 aa11.78□□□□□ -0.52
CHMP1A-205ENST00000548650 A0A087WTM6 91 aa11.77□□□□□ -0.53
CHMP1A-205ENST00000548650 K7EP13 123 aa11.77□□□□□ -0.53
CHMP1A-205ENST00000548650 EREGO14944 169 aa11.77□□□□□ -0.53
CHMP1A-205ENST00000548650 CDC34P49427 236 aaPredicted RBP11.77□□□□□ -0.53
CHMP1A-205ENST00000548650 OR2G3Q8NGZ4 309 aa11.77□□□□□ -0.53
CHMP1A-205ENST00000548650 PGPEP1Q9NXJ5 209 aa11.77□□□□□ -0.53
CHMP1A-205ENST00000548650 MSRB1Q9NZV6 116 aa11.77□□□□□ -0.53
CHMP1A-205ENST00000548650 TRAV9-2A0A087WT02 112 aa11.76□□□□□ -0.53
CHMP1A-205ENST00000548650 STAG3L2P0CL84 134 aa11.76□□□□□ -0.53
CHMP1A-205ENST00000548650 STAG3L3P0CL85 134 aa11.76□□□□□ -0.53
CHMP1A-205ENST00000548650 GATA1P15976 413 aaPredicted RBP11.76□□□□□ -0.53
CHMP1A-205ENST00000548650 KCNS1Q96KK3 526 aa11.76□□□□□ -0.53
CHMP1A-205ENST00000548650 EVI2AP22794 236 aa11.75□□□□□ -0.53
CHMP1A-205ENST00000548650 Q5BKY6 102 aa11.75□□□□□ -0.53
CHMP1A-205ENST00000548650 C5orf17Q8NAS9 161 aa11.75□□□□□ -0.53
CHMP1A-205ENST00000548650 HSD17B11Q8NBQ5 300 aa11.75□□□□□ -0.53
CHMP1A-205ENST00000548650 SUN5Q8TC36 379 aa11.75□□□□□ -0.53
CHMP1A-205ENST00000548650 ASB13Q8WXK3 278 aa11.75□□□□□ -0.53
CHMP1A-205ENST00000548650 SGK494Q96LW2 274 aa11.75□□□□□ -0.53
CHMP1A-205ENST00000548650 C11orf21Q9P2W6 132 aa11.75□□□□□ -0.53
CHMP1A-205ENST00000548650 SERTM2A0A1B0GWG4 89 aa11.74□□□□□ -0.53
CHMP1A-205ENST00000548650 TCRAP04437 139 aa11.74□□□□□ -0.53
CHMP1A-205ENST00000548650 GIPP09681 153 aaPredicted RBP11.74□□□□□ -0.53
CHMP1A-205ENST00000548650 ZNF80P51504 273 aaPredicted RBP11.74□□□□□ -0.53
CHMP1A-205ENST00000548650 TIRAPP58753 221 aa11.74□□□□□ -0.53
CHMP1A-205ENST00000548650 NDFIP1Q9BT67 221 aa11.74□□□□□ -0.53
CHMP1A-205ENST00000548650 PSMG3Q9BT73 122 aaPredicted RBP11.74□□□□□ -0.53
CHMP1A-205ENST00000548650 FBLL1A6NHQ2 334 aaKnown RBP11.73□□□□□ -0.53
CHMP1A-205ENST00000548650 GGTLC3B5MD39 225 aa11.73□□□□□ -0.53
CHMP1A-205ENST00000548650 CRYGDP07320 174 aa11.73□□□□□ -0.53
CHMP1A-205ENST00000548650 GCHFRP30047 84 aa11.73□□□□□ -0.53
CHMP1A-205ENST00000548650 SH2D6Q7Z4S9 175 aa11.73□□□□□ -0.53
CHMP1A-205ENST00000548650 NHLRC2Q8NBF2 726 aa11.73□□□□□ -0.53
CHMP1A-205ENST00000548650 RAB24Q969Q5 203 aa11.73□□□□□ -0.53
CHMP1A-205ENST00000548650 AQP10Q96PS8 301 aa11.73□□□□□ -0.53
CHMP1A-205ENST00000548650 IGLV2-11P01706 119 aa11.72□□□□□ -0.53
CHMP1A-205ENST00000548650 ATP6V0CP27449 155 aa11.72□□□□□ -0.53
CHMP1A-205ENST00000548650 XGP55808 180 aa11.72□□□□□ -0.53
CHMP1A-205ENST00000548650 DPPA3Q6W0C5 159 aa11.72□□□□□ -0.53
CHMP1A-205ENST00000548650 C10orf126Q8N4M7 172 aa11.72□□□□□ -0.53
CHMP1A-205ENST00000548650 TMEM75Q8N9X5 138 aa11.72□□□□□ -0.53
CHMP1A-205ENST00000548650 C9orf85Q96MD7 179 aa11.72□□□□□ -0.53
CHMP1A-205ENST00000548650 GCGP01275 180 aa11.71□□□□□ -0.53
CHMP1A-205ENST00000548650 PPT1P50897 306 aa11.71□□□□□ -0.53
CHMP1A-205ENST00000548650 KRTAP10-1P60331 282 aa11.71□□□□□ -0.53
CHMP1A-205ENST00000548650 ZNF876PQ49A33 203 aa11.71□□□□□ -0.53
CHMP1A-205ENST00000548650 CFAP126Q5VTH2 177 aa11.71□□□□□ -0.53
CHMP1A-205ENST00000548650 SLC25A29Q8N8R3 303 aa11.71□□□□□ -0.53
CHMP1A-205ENST00000548650 SH3BGRL3Q9H299 93 aa11.71□□□□□ -0.53
CHMP1A-205ENST00000548650 PSG8Q9UQ74 426 aa11.71□□□□□ -0.53
CHMP1A-205ENST00000548650 IGHV3-38A0A0C4DH36 116 aa11.7□□□□□ -0.54
CHMP1A-205ENST00000548650 EPM2AB3EWF7 344 aa11.7□□□□□ -0.54
CHMP1A-205ENST00000548650 RS1O15537 224 aa11.7□□□□□ -0.54
CHMP1A-205ENST00000548650 PFN1P07737 140 aaKnown RBP11.7□□□□□ -0.54
CHMP1A-205ENST00000548650 LINC01556Q5JQF7 62 aa11.7□□□□□ -0.54
CHMP1A-205ENST00000548650 K7EQM0 130 aa11.69□□□□□ -0.54
CHMP1A-205ENST00000548650 TAAR5O14804 337 aa11.69□□□□□ -0.54
CHMP1A-205ENST00000548650 FLI1Q01543 452 aaPredicted RBP11.69□□□□□ -0.54
CHMP1A-205ENST00000548650 RHOHQ15669 191 aa11.69□□□□□ -0.54
CHMP1A-205ENST00000548650 ZNF506Q5JVG8 444 aa11.69□□□□□ -0.54
CHMP1A-205ENST00000548650 CYB561D1Q8N8Q1 229 aa11.69□□□□□ -0.54
CHMP1A-205ENST00000548650 OR2T35Q8NGX2 323 aa11.69□□□□□ -0.54
CHMP1A-205ENST00000548650 TMEM167BQ9NRX6 74 aa11.69□□□□□ -0.54
CHMP1A-205ENST00000548650 FAT1Q14517 4588 aa11.69□□□□□ -0.54
CHMP1A-205ENST00000548650 FXYD6-FXYD2A0A087WZ82 144 aa11.68□□□□□ -0.54
CHMP1A-205ENST00000548650 TRBV6-4A0A1B0GX49 114 aa11.68□□□□□ -0.54
CHMP1A-205ENST00000548650 MBP02144 154 aa11.68□□□□□ -0.54
CHMP1A-205ENST00000548650 RNASE3P12724 160 aaKnown RBP11.68□□□□□ -0.54
CHMP1A-205ENST00000548650 SUMO1P63165 101 aaKnown RBP11.68□□□□□ -0.54
CHMP1A-205ENST00000548650 SERF2P84101 59 aa11.68□□□□□ -0.54
CHMP1A-205ENST00000548650 ZFP69Q49AA0 526 aa11.68□□□□□ -0.54
CHMP1A-205ENST00000548650 EPDR1Q9UM22 224 aa11.68□□□□□ -0.54
CHMP1A-205ENST00000548650 IGHV3-73A0A0B4J1V6 119 aa11.67□□□□□ -0.54
CHMP1A-205ENST00000548650 PGPEP1LA6NFU8 196 aa11.67□□□□□ -0.54
CHMP1A-205ENST00000548650 CIDEAO60543 219 aa11.67□□□□□ -0.54
CHMP1A-205ENST00000548650 CXorf1O96002 111 aa11.67□□□□□ -0.54
CHMP1A-205ENST00000548650 SMUG1Q53HV7 270 aa11.67□□□□□ -0.54
CHMP1A-205ENST00000548650 PRNTQ86SH4 94 aa11.67□□□□□ -0.54
CHMP1A-205ENST00000548650 INO80EQ8NBZ0 244 aaPredicted RBP11.67□□□□□ -0.54
CHMP1A-205ENST00000548650 PTH2Q96A98 100 aa11.67□□□□□ -0.54
CHMP1A-205ENST00000548650 PRADC1Q9BSG0 188 aa11.67□□□□□ -0.54
CHMP1A-205ENST00000548650 TNFSF18Q9UNG2 199 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms