RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 IGKV2-24A0A0C4DH68 120 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 INS-IGF2F8WCM5 200 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 GNGT2O14610 69 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 EDF1O60869 148 aaKnown RBP1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 MED6O75586 246 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 IFNA7P01567 189 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 CTXN2P0C2S0 81 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 OR10J4P0C629 311 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 SEC11BP0C7V7 166 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 PSMA1P25786 263 aaKnown RBP1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 PSMB9P28065 219 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 HRH1P35367 487 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 G6PCP35575 357 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 SNCAP37840 140 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 LPAR6P43657 344 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 GALR1P47211 349 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 DAPP51397 102 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 UBE2D1P51668 147 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 KRTAP12-4P60329 112 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 HSPE1P61604 102 aaKnown RBP1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 FLOT2Q14254 428 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 RAB11BQ15907 218 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 CCDC58Q4VC31 144 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 HSP90B2PQ58FF3 399 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 IDNKQ5T6J7 187 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 HACD4Q5VWC8 232 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 PRSS54Q6PEW0 395 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 Q6ZQT7 251 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 CROCCP2Q86T23 111 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 NIT1Q86X76 327 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 EIF4E3Q8N5X7 224 aaKnown RBP1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 OR10P1Q8NGE3 313 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 OR10G9Q8NGN4 311 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 OR51H1Q8NH63 302 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 SMIM19Q96E16 107 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 TSC22D3Q99576 134 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 GTSF1LQ9H1H1 148 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 OR51M1Q9H341 326 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 NUDT15Q9NV35 164 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 FGFR1OP2Q9NVK5 253 aa1.18□□□□□ -2.22
DEPDC4-204ENST00000547823 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 TRAV4A0A0B4J268 109 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 PNMA8CA0A1B0GUJ8 204 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 FABP12A6NFH5 140 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 NDUFS6O75380 124 aaKnown RBP1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 HLA-DQA1P01909 254 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 SLC25A4P12235 298 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 PTHLHP12272 177 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 TBPP20226 339 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 DTYMKP23919 212 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 F2RP25116 425 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 TALDO1P37837 337 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 NMUP48645 174 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 ZNF138P52744 262 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 SUB1P53999 127 aaKnown RBP eCLIP1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 OR10A3P58181 314 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 ARPC4P59998 168 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 TSPAN5P62079 268 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 POLR2GP62487 172 aaKnown RBP eCLIP1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 COX6A2Q02221 97 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 Q0VG73 95 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 SS18Q15532 418 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 TRIM16LQ309B1 348 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 DEFB116Q30KQ4 102 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 BSXQ3C1V8 233 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 KRTAP19-6Q3LI70 58 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 HSD17B12Q53GQ0 312 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 AADACL3Q5VUY0 350 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 ENHOQ6UWT2 76 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 ZNF818PQ6ZRF7 136 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 ARRDC1Q8N5I2 433 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 DHRSXQ8N5I4 330 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 LINC00337Q8N6G1 96 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 SLC35G3Q8N808 338 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 BPIFCQ8NFQ6 507 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 SUN5Q8TC36 379 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 ZNF431Q8TF32 576 aaPredicted RBP1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 ACY3Q96HD9 319 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 TMEM222Q9H0R3 208 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 CARHSP1Q9Y2V2 147 aaKnown RBP1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 TMEM56-RWDD3S4R434 201 aa1.17□□□□□ -2.22
DEPDC4-204ENST00000547823 IGLV10-54A0A075B6I4 117 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 A0A096LNI7 61 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 LINC00854A0A1B0GVQ3 168 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 C7orf71A4D174 169 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 PGPA6NDG6 321 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 CRYM-AS1A6NIL9 109 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 AGPAT2O15120 278 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 MPDU1O75352 247 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 PGLYRP1O75594 196 aaPredicted RBP1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 PPYP01298 95 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 CRPP02741 224 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 MT-ND6P03923 174 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 IGLV7-43P04211 117 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 SLC25A5P05141 298 aaKnown RBP1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 LIMS3P0CW19 117 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 LIMS4P0CW20 117 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 HIST1H1DP16402 221 aaKnown RBP1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 CXCL3P19876 107 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 HLA-DMAP28067 261 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms