RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 Q8NDZ9 215 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 OR4X2Q8NGF9 303 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 SLC25A21Q9BQT8 299 aaPredicted RBP2.33□□□□□ -2.04
SCAF11-210ENST00000547654 ADAT1Q9BUB4 502 aaKnown RBP2.33□□□□□ -2.04
SCAF11-210ENST00000547654 MRPL32Q9BYC8 188 aaKnown RBP2.33□□□□□ -2.04
SCAF11-210ENST00000547654 TCEAL2Q9H3H9 227 aaPredicted RBP2.33□□□□□ -2.04
SCAF11-210ENST00000547654 POPDC3Q9HBV1 291 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 NHP2Q9NX24 153 aaKnown RBP2.33□□□□□ -2.04
SCAF11-210ENST00000547654 NAT8BQ9UHF3 227 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 MED31Q9Y3C7 131 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 COL1A2P08123 1366 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 ZNF407Q9C0G0 2248 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 PRR14LQ5THK1 2151 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 IGKV1-9A0A0C4DH69 117 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 TRDV1A0A1B0GX56 115 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 MEIS3P1A6NDR6 274 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 RFPL4AA6NLU0 287 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 ODF3BA8MYP8 253 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 RFPL4AL1F8VTS6 287 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 C3orf84H3BNL1 204 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 NDUFB3O43676 98 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 LYZL6O75951 148 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 DYNLT3P51808 116 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 CKS1BP61024 79 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 RELAQ04206 551 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 FAM27BQ5VT28 67 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 LCN15Q6UWW0 184 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 TMEM229BQ8NBD8 167 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 OR2T10Q8NGZ9 312 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 CARD19Q96LW7 228 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 ZNF714Q96N38 554 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 PRADC1Q9BSG0 188 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 NPCDR1Q9BY65 106 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 MYH4Q9Y623 1939 aa2.32□□□□□ -2.04
SCAF11-210ENST00000547654 ANK3Q12955 4377 aaKnown RBP2.32□□□□□ -2.04
SCAF11-210ENST00000547654 ZFC3H1O60293 1989 aaKnown RBP2.31□□□□□ -2.04
SCAF11-210ENST00000547654 TRAV36DV7A0A075B6V5 113 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 ODAMA1E959 279 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 TMEM189A5PLL7 270 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 OVOL1O14753 267 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 IGLV3-19P01714 112 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 TRGC1P0CF51 173 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 COX6A1P12074 109 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 HLA-EP13747 358 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 CMPK1P30085 196 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 RNASE4P34096 147 aaKnown RBP2.31□□□□□ -2.04
SCAF11-210ENST00000547654 AKR1C3P42330 323 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 SRP9P49458 86 aaKnown RBP2.31□□□□□ -2.04
SCAF11-210ENST00000547654 RHOGP84095 191 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 PRR15Q8IV56 129 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 PDZD9Q8IXQ8 264 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 LINC00471Q8N535 108 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 TSC22D3Q99576 134 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 LXNQ9BS40 222 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 OTORQ9NRC9 128 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 BAIAP2Q9UQB8 552 aa2.31□□□□□ -2.04
SCAF11-210ENST00000547654 SHANK1Q9Y566 2161 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 IGLV10-54A0A075B6I4 117 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 A0A087WX48 190 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 A0A1B0GX51 115 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 ARRDC5A6NEK1 342 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 HMSDA8MTL9 139 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 FNDC10F2Z333 226 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 GABARAPH6UMI1 98 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 CXCL1P09341 107 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 RPS3P23396 243 aaKnown RBP eCLIP2.3□□□□□ -2.04
SCAF11-210ENST00000547654 FKBP2P26885 142 aaKnown RBP2.3□□□□□ -2.04
SCAF11-210ENST00000547654 SDC2P34741 201 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 OR8B8Q15620 311 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 MSMO1Q15800 293 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 HRCT1Q6UXD1 115 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 SLC30A7Q8NEW0 376 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 CACYBPQ9HB71 228 aaKnown RBP2.3□□□□□ -2.04
SCAF11-210ENST00000547654 ANK1P16157 1881 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 SEC16AO15027 2179 aa2.3□□□□□ -2.04
SCAF11-210ENST00000547654 BAZ2BQ9UIF8 2168 aaKnown RBP2.3□□□□□ -2.04
SCAF11-210ENST00000547654 MYH7P12883 1935 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 OBSL1O75147 1896 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 TRAV5A0A0B4J249 113 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 MUC21A0A0G2JKD1 596 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 MUC21A0A140T8X8 626 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 A0A1B0GVG6 124 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 H7BYZ3 331 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 NAPSAO96009 420 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 PMP2P02689 132 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 IFNA4P05014 189 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 CRYGAP11844 174 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 FABP2P12104 132 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 FUSP35637 526 aaKnown RBP eCLIP2.29□□□□□ -2.04
SCAF11-210ENST00000547654 ARPP19P56211 112 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 HBBP68871 147 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 PSPHP78330 225 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 PSG9Q00887 426 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 OR8I2Q8N0Y5 310 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 OR4K15Q8NH41 348 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 AQP3Q92482 292 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 Q9BRP9 147 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 OR2H1Q9GZK4 316 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 HS3ST2Q9Y278 367 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 RNF11Q9Y3C5 154 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms