RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 M0R2P5 195 aa9.06□□□□□ -0.96
CPSF6-204ENST00000547486 TYMSP04818 313 aa9.06□□□□□ -0.96
CPSF6-204ENST00000547486 STAG3L2P0CL84 134 aa9.06□□□□□ -0.96
CPSF6-204ENST00000547486 STAG3L3P0CL85 134 aa9.06□□□□□ -0.96
CPSF6-204ENST00000547486 ARL14EPLP0DKL9 152 aa9.06□□□□□ -0.96
CPSF6-204ENST00000547486 SRIP30626 198 aa9.06□□□□□ -0.96
CPSF6-204ENST00000547486 ZNF80P51504 273 aaPredicted RBP9.06□□□□□ -0.96
CPSF6-204ENST00000547486 WFDC10BQ8IUB3 73 aa9.06□□□□□ -0.96
CPSF6-204ENST00000547486 HSD17B11Q8NBQ5 300 aa9.06□□□□□ -0.96
CPSF6-204ENST00000547486 OR4C5Q8NGB2 326 aa9.06□□□□□ -0.96
CPSF6-204ENST00000547486 SUN5Q8TC36 379 aa9.06□□□□□ -0.96
CPSF6-204ENST00000547486 C11orf21Q9P2W6 132 aa9.06□□□□□ -0.96
CPSF6-204ENST00000547486 TRAV4A0A0B4J268 109 aa9.05□□□□□ -0.96
CPSF6-204ENST00000547486 Q8N1X5 172 aa9.05□□□□□ -0.96
CPSF6-204ENST00000547486 OR2G3Q8NGZ4 309 aa9.05□□□□□ -0.96
CPSF6-204ENST00000547486 RAB24Q969Q5 203 aa9.05□□□□□ -0.96
CPSF6-204ENST00000547486 ORM1P02763 201 aa9.04□□□□□ -0.96
CPSF6-204ENST00000547486 TCRAP04437 139 aa9.04□□□□□ -0.96
CPSF6-204ENST00000547486 ATP6V0CP27449 155 aa9.04□□□□□ -0.96
CPSF6-204ENST00000547486 GCHFRP30047 84 aa9.04□□□□□ -0.96
CPSF6-204ENST00000547486 CDC34P49427 236 aaPredicted RBP9.04□□□□□ -0.96
CPSF6-204ENST00000547486 AQP10Q96PS8 301 aa9.04□□□□□ -0.96
CPSF6-204ENST00000547486 SH3BGRL3Q9H299 93 aa9.04□□□□□ -0.96
CPSF6-204ENST00000547486 SDF2L1Q9HCN8 221 aa9.04□□□□□ -0.96
CPSF6-204ENST00000547486 SCRT2Q9NQ03 307 aa9.04□□□□□ -0.96
CPSF6-204ENST00000547486 LY96Q9Y6Y9 160 aa9.04□□□□□ -0.96
CPSF6-204ENST00000547486 TRAV9-2A0A087WT02 112 aa9.03□□□□□ -0.96
CPSF6-204ENST00000547486 IGLV2-11P01706 119 aa9.03□□□□□ -0.96
CPSF6-204ENST00000547486 DNAH10OSP0CZ25 163 aa9.03□□□□□ -0.96
CPSF6-204ENST00000547486 DPPA3Q6W0C5 159 aa9.03□□□□□ -0.96
CPSF6-204ENST00000547486 PCNPQ8WW12 178 aaKnown RBP9.03□□□□□ -0.96
CPSF6-204ENST00000547486 ASB13Q8WXK3 278 aa9.03□□□□□ -0.96
CPSF6-204ENST00000547486 PSMG3Q9BT73 122 aaPredicted RBP9.03□□□□□ -0.96
CPSF6-204ENST00000547486 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
CPSF6-204ENST00000547486 GGTLC3B5MD39 225 aa9.02□□□□□ -0.97
CPSF6-204ENST00000547486 C9JCJ5 164 aa9.02□□□□□ -0.97
CPSF6-204ENST00000547486 GATA1P15976 413 aaPredicted RBP9.02□□□□□ -0.97
CPSF6-204ENST00000547486 SUMO1P63165 101 aaKnown RBP9.02□□□□□ -0.97
CPSF6-204ENST00000547486 TMEM75Q8N9X5 138 aa9.02□□□□□ -0.97
CPSF6-204ENST00000547486 C5orf17Q8NAS9 161 aa9.02□□□□□ -0.97
CPSF6-204ENST00000547486 KCNS1Q96KK3 526 aa9.02□□□□□ -0.97
CPSF6-204ENST00000547486 MED28Q9H204 178 aa9.02□□□□□ -0.97
CPSF6-204ENST00000547486 BATF3Q9NR55 127 aa9.02□□□□□ -0.97
CPSF6-204ENST00000547486 MSRB1Q9NZV6 116 aa9.02□□□□□ -0.97
CPSF6-204ENST00000547486 EPDR1Q9UM22 224 aa9.02□□□□□ -0.97
CPSF6-204ENST00000547486 PSG8Q9UQ74 426 aa9.02□□□□□ -0.97
CPSF6-204ENST00000547486 A0A087WTM6 91 aa9.01□□□□□ -0.97
CPSF6-204ENST00000547486 SERTM2A0A1B0GWG4 89 aa9.01□□□□□ -0.97
CPSF6-204ENST00000547486 GCGP01275 180 aa9.01□□□□□ -0.97
CPSF6-204ENST00000547486 ERVFC1-1P60608 527 aa9.01□□□□□ -0.97
CPSF6-204ENST00000547486 SERF2P84101 59 aa9.01□□□□□ -0.97
CPSF6-204ENST00000547486 ZNF876PQ49A33 203 aa9.01□□□□□ -0.97
CPSF6-204ENST00000547486 NFE4Q86UQ8 179 aa9.01□□□□□ -0.97
CPSF6-204ENST00000547486 SLC25A29Q8N8R3 303 aa9.01□□□□□ -0.97
CPSF6-204ENST00000547486 LINC00479Q96M42 142 aa9.01□□□□□ -0.97
CPSF6-204ENST00000547486 TXNDC17Q9BRA2 123 aa9.01□□□□□ -0.97
CPSF6-204ENST00000547486 IGHV3-73A0A0B4J1V6 119 aa9□□□□□ -0.97
CPSF6-204ENST00000547486 TAAR5O14804 337 aa9□□□□□ -0.97
CPSF6-204ENST00000547486 RS1O15537 224 aa9□□□□□ -0.97
CPSF6-204ENST00000547486 PTTG1O95997 202 aa9□□□□□ -0.97
CPSF6-204ENST00000547486 EVI2AP22794 236 aa9□□□□□ -0.97
CPSF6-204ENST00000547486 CFAP126Q5VTH2 177 aa9□□□□□ -0.97
CPSF6-204ENST00000547486 RPL7L1Q6DKI1 246 aaKnown RBP9□□□□□ -0.97
CPSF6-204ENST00000547486 PRNTQ86SH4 94 aa9□□□□□ -0.97
CPSF6-204ENST00000547486 NDFIP1Q9BT67 221 aa9□□□□□ -0.97
CPSF6-204ENST00000547486 ACTR3CQ9C0K3 210 aaPredicted RBP9□□□□□ -0.97
CPSF6-204ENST00000547486 TNFSF18Q9UNG2 199 aa9□□□□□ -0.97
CPSF6-204ENST00000547486 RNF222A6NCQ9 220 aa8.99□□□□□ -0.97
CPSF6-204ENST00000547486 PGPEP1LA6NFU8 196 aa8.99□□□□□ -0.97
CPSF6-204ENST00000547486 FBLL1A6NHQ2 334 aaKnown RBP8.99□□□□□ -0.97
CPSF6-204ENST00000547486 K7EP13 123 aa8.99□□□□□ -0.97
CPSF6-204ENST00000547486 EREGO14944 169 aa8.99□□□□□ -0.97
CPSF6-204ENST00000547486 CXorf1O96002 111 aa8.99□□□□□ -0.97
CPSF6-204ENST00000547486 MBP02144 154 aa8.99□□□□□ -0.97
CPSF6-204ENST00000547486 CRYGDP07320 174 aa8.99□□□□□ -0.97
CPSF6-204ENST00000547486 PFN1P07737 140 aaKnown RBP8.99□□□□□ -0.97
CPSF6-204ENST00000547486 RNASE3P12724 160 aaKnown RBP8.99□□□□□ -0.97
CPSF6-204ENST00000547486 XGP55808 180 aa8.99□□□□□ -0.97
CPSF6-204ENST00000547486 TIRAPP58753 221 aa8.99□□□□□ -0.97
CPSF6-204ENST00000547486 FLI1Q01543 452 aaPredicted RBP8.99□□□□□ -0.97
CPSF6-204ENST00000547486 ZNF726P1Q15940 193 aa8.99□□□□□ -0.97
CPSF6-204ENST00000547486 NHLRC2Q8NBF2 726 aa8.99□□□□□ -0.97
CPSF6-204ENST00000547486 C9orf85Q96MD7 179 aa8.99□□□□□ -0.97
CPSF6-204ENST00000547486 TMEM167BQ9NRX6 74 aa8.99□□□□□ -0.97
CPSF6-204ENST00000547486 TRAV34A0A0B4J273 112 aa8.98□□□□□ -0.97
CPSF6-204ENST00000547486 K7EQM0 130 aa8.98□□□□□ -0.97
CPSF6-204ENST00000547486 KRTAP10-1P60331 282 aa8.98□□□□□ -0.97
CPSF6-204ENST00000547486 SMUG1Q53HV7 270 aa8.98□□□□□ -0.97
CPSF6-204ENST00000547486 Q6ZSN1 163 aa8.98□□□□□ -0.97
CPSF6-204ENST00000547486 SH2D6Q7Z4S9 175 aa8.98□□□□□ -0.97
CPSF6-204ENST00000547486 CYB561D1Q8N8Q1 229 aa8.98□□□□□ -0.97
CPSF6-204ENST00000547486 IGKV3D-20A0A0C4DH25 116 aa8.97□□□□□ -0.97
CPSF6-204ENST00000547486 IGHV3-38A0A0C4DH36 116 aa8.97□□□□□ -0.97
CPSF6-204ENST00000547486 TRBV6-4A0A1B0GX49 114 aa8.97□□□□□ -0.97
CPSF6-204ENST00000547486 A0A1W2PRE2 83 aa8.97□□□□□ -0.97
CPSF6-204ENST00000547486 GIPP09681 153 aaPredicted RBP8.97□□□□□ -0.97
CPSF6-204ENST00000547486 PPT1P50897 306 aa8.97□□□□□ -0.97
CPSF6-204ENST00000547486 ZNF506Q5JVG8 444 aa8.97□□□□□ -0.97
CPSF6-204ENST00000547486 CDPF1Q6NVV7 123 aa8.97□□□□□ -0.97
CPSF6-204ENST00000547486 PTH2Q96A98 100 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms