RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PFDN1O60925 122 aa11.07□□□□□ -0.64
DDX54-204ENST00000546898 GCGP01275 180 aa11.07□□□□□ -0.64
DDX54-204ENST00000546898 TYMSP04818 313 aa11.07□□□□□ -0.64
DDX54-204ENST00000546898 SLAQ13239 276 aa11.07□□□□□ -0.64
DDX54-204ENST00000546898 SMUG1Q53HV7 270 aa11.07□□□□□ -0.64
DDX54-204ENST00000546898 LINC00336Q6ZUF6 198 aa11.07□□□□□ -0.64
DDX54-204ENST00000546898 PRNTQ86SH4 94 aa11.07□□□□□ -0.64
DDX54-204ENST00000546898 C8orf49Q96NF6 230 aa11.07□□□□□ -0.64
DDX54-204ENST00000546898 TCEAL7Q9BRU2 100 aa11.07□□□□□ -0.64
DDX54-204ENST00000546898 IGLV2-18A0A075B6J9 118 aa11.06□□□□□ -0.64
DDX54-204ENST00000546898 IGHV3-16A0A0C4DH30 117 aa11.06□□□□□ -0.64
DDX54-204ENST00000546898 PEX7O00628 323 aa11.06□□□□□ -0.64
DDX54-204ENST00000546898 PFN1P07737 140 aaKnown RBP11.06□□□□□ -0.64
DDX54-204ENST00000546898 TPT1P13693 172 aaKnown RBP11.06□□□□□ -0.64
DDX54-204ENST00000546898 DPPA3Q6W0C5 159 aa11.06□□□□□ -0.64
DDX54-204ENST00000546898 Q6ZR54 194 aa11.06□□□□□ -0.64
DDX54-204ENST00000546898 RASL10AQ92737 203 aa11.06□□□□□ -0.64
DDX54-204ENST00000546898 LINC00588Q9Y4M8 146 aa11.06□□□□□ -0.64
DDX54-204ENST00000546898 M0R2N4 97 aa11.05□□□□□ -0.64
DDX54-204ENST00000546898 FHITP49789 147 aa11.05□□□□□ -0.64
DDX54-204ENST00000546898 ZNF80P51504 273 aaPredicted RBP11.05□□□□□ -0.64
DDX54-204ENST00000546898 TMUB2Q71RG4 321 aa11.05□□□□□ -0.64
DDX54-204ENST00000546898 TCTE3Q8IZS6 198 aa11.05□□□□□ -0.64
DDX54-204ENST00000546898 ZNRF2Q8NHG8 242 aa11.05□□□□□ -0.64
DDX54-204ENST00000546898 FAM213BQ8TBF2 198 aa11.05□□□□□ -0.64
DDX54-204ENST00000546898 MBD3L1Q8WWY6 194 aa11.05□□□□□ -0.64
DDX54-204ENST00000546898 VSIG2Q96IQ7 327 aa11.05□□□□□ -0.64
DDX54-204ENST00000546898 PRO0255Q9UI72 69 aa11.05□□□□□ -0.64
DDX54-204ENST00000546898 M0R2P5 195 aa11.04□□□□□ -0.64
DDX54-204ENST00000546898 GNRH2O43555 120 aa11.04□□□□□ -0.64
DDX54-204ENST00000546898 IGHV3-53P01767 116 aa11.04□□□□□ -0.64
DDX54-204ENST00000546898 Q6ZNX1 250 aa11.04□□□□□ -0.64
DDX54-204ENST00000546898 Q86TA4 180 aa11.04□□□□□ -0.64
DDX54-204ENST00000546898 HECTD4Q9Y4D8 3996 aa11.04□□□□□ -0.64
DDX54-204ENST00000546898 A0A096LPF7 62 aa11.03□□□□□ -0.64
DDX54-204ENST00000546898 TRAV34A0A0B4J273 112 aa11.03□□□□□ -0.64
DDX54-204ENST00000546898 FHL2Q14192 279 aa11.03□□□□□ -0.64
DDX54-204ENST00000546898 LINC00479Q96M42 142 aa11.03□□□□□ -0.64
DDX54-204ENST00000546898 C11orf21Q9P2W6 132 aa11.03□□□□□ -0.64
DDX54-204ENST00000546898 DNAH2Q9P225 4427 aa11.02□□□□□ -0.64
DDX54-204ENST00000546898 TRAV4A0A0B4J268 109 aa11.02□□□□□ -0.65
DDX54-204ENST00000546898 PAX4O43316 350 aa11.02□□□□□ -0.65
DDX54-204ENST00000546898 CRYBA4P53673 196 aa11.02□□□□□ -0.65
DDX54-204ENST00000546898 UBE2G1P62253 170 aa11.02□□□□□ -0.65
DDX54-204ENST00000546898 SOHLH1Q5JUK2 328 aa11.02□□□□□ -0.65
DDX54-204ENST00000546898 SFT2D1Q8WV19 159 aa11.02□□□□□ -0.65
DDX54-204ENST00000546898 FMC1Q96HJ9 113 aa11.02□□□□□ -0.65
DDX54-204ENST00000546898 UPK3BQ9BT76 320 aa11.02□□□□□ -0.65
DDX54-204ENST00000546898 ICOSQ9Y6W8 199 aa11.02□□□□□ -0.65
DDX54-204ENST00000546898 DNAH17Q9UFH2 4485 aa11.01□□□□□ -0.65
DDX54-204ENST00000546898 TRGV4A0A0C4DH28 118 aa11.01□□□□□ -0.65
DDX54-204ENST00000546898 TRBV6-1A0A0K0K1D8 114 aa11.01□□□□□ -0.65
DDX54-204ENST00000546898 NBDYA0A0U1RRE5 68 aa11.01□□□□□ -0.65
DDX54-204ENST00000546898 LGALSLQ3ZCW2 172 aaPredicted RBP11.01□□□□□ -0.65
DDX54-204ENST00000546898 CST9LP1Q5W188 147 aa11.01□□□□□ -0.65
DDX54-204ENST00000546898 EIF5AL1Q6IS14 154 aaKnown RBP11.01□□□□□ -0.65
DDX54-204ENST00000546898 COX8CQ7Z4L0 72 aa11.01□□□□□ -0.65
DDX54-204ENST00000546898 ZNF479Q96JC4 524 aa11.01□□□□□ -0.65
DDX54-204ENST00000546898 HHLA3Q9XRX5 114 aa11.01□□□□□ -0.65
DDX54-204ENST00000546898 ZFP30Q9Y2G7 519 aa11.01□□□□□ -0.65
DDX54-204ENST00000546898 MRPS16Q9Y3D3 137 aaKnown RBP11.01□□□□□ -0.65
DDX54-204ENST00000546898 FABP5P3A8MUU1 101 aa11□□□□□ -0.65
DDX54-204ENST00000546898 RTL8CO15255 209 aa11□□□□□ -0.65
DDX54-204ENST00000546898 PAGE4O60829 102 aa11□□□□□ -0.65
DDX54-204ENST00000546898 C1QBP02746 253 aa11□□□□□ -0.65
DDX54-204ENST00000546898 H2AFB1P0C5Y9 115 aa11□□□□□ -0.65
DDX54-204ENST00000546898 SFTA3P0C7M3 94 aa11□□□□□ -0.65
DDX54-204ENST00000546898 ESRGQ1W209 222 aa11□□□□□ -0.65
DDX54-204ENST00000546898 OR4C5Q8NGB2 326 aa11□□□□□ -0.65
DDX54-204ENST00000546898 C9orf85Q96MD7 179 aa11□□□□□ -0.65
DDX54-204ENST00000546898 AKR1C3P42330 323 aa10.99□□□□□ -0.65
DDX54-204ENST00000546898 RAB5CP51148 216 aa10.99□□□□□ -0.65
DDX54-204ENST00000546898 MRPL23Q16540 153 aaKnown RBP10.99□□□□□ -0.65
DDX54-204ENST00000546898 C1orf134Q5TEV5 83 aa10.99□□□□□ -0.65
DDX54-204ENST00000546898 PTH2Q96A98 100 aa10.99□□□□□ -0.65
DDX54-204ENST00000546898 A0A1B0GV50 99 aa10.98□□□□□ -0.65
DDX54-204ENST00000546898 PRSS29PA6NIE9 313 aa10.98□□□□□ -0.65
DDX54-204ENST00000546898 CIDEAO60543 219 aa10.98□□□□□ -0.65
DDX54-204ENST00000546898 ORM1P02763 201 aa10.98□□□□□ -0.65
DDX54-204ENST00000546898 ZNF876PQ49A33 203 aa10.98□□□□□ -0.65
DDX54-204ENST00000546898 TTC32Q5I0X7 151 aa10.98□□□□□ -0.65
DDX54-204ENST00000546898 ZC2HC1AQ96GY0 325 aa10.98□□□□□ -0.65
DDX54-204ENST00000546898 Q9H8V8 135 aa10.98□□□□□ -0.65
DDX54-204ENST00000546898 FAT2Q9NYQ8 4349 aa10.98□□□□□ -0.65
DDX54-204ENST00000546898 IGKV3D-20A0A0C4DH25 116 aa10.97□□□□□ -0.65
DDX54-204ENST00000546898 LTAP01374 205 aa10.97□□□□□ -0.65
DDX54-204ENST00000546898 S100A9P06702 114 aaKnown RBP10.97□□□□□ -0.65
DDX54-204ENST00000546898 RNASE3P12724 160 aaKnown RBP10.97□□□□□ -0.65
DDX54-204ENST00000546898 AKAP14Q86UN6 197 aa10.97□□□□□ -0.65
DDX54-204ENST00000546898 PCNPQ8WW12 178 aaKnown RBP10.97□□□□□ -0.65
DDX54-204ENST00000546898 TRAV1-1A0A0B4J248 108 aa10.96□□□□□ -0.65
DDX54-204ENST00000546898 A0A1W2PPQ1 181 aa10.96□□□□□ -0.65
DDX54-204ENST00000546898 C9JCJ5 164 aa10.96□□□□□ -0.65
DDX54-204ENST00000546898 TEX46H3BTG2 121 aa10.96□□□□□ -0.65
DDX54-204ENST00000546898 S100A4P26447 101 aaKnown RBP10.96□□□□□ -0.65
DDX54-204ENST00000546898 ASIPP42127 132 aa10.96□□□□□ -0.65
DDX54-204ENST00000546898 FAM162BQ5T6X4 162 aa10.96□□□□□ -0.65
DDX54-204ENST00000546898 NEGR1Q7Z3B1 354 aa10.96□□□□□ -0.65
DDX54-204ENST00000546898 SLC51BQ86UW2 128 aa10.96□□□□□ -0.65
DDX54-204ENST00000546898 MANBALQ9NQG1 85 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms