RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 FXYD1O00168 92 aa-0.02□□□□□ -2.41
CCDC38-204ENST00000546816 UQCRQO14949 82 aa-0.02□□□□□ -2.41
CCDC38-204ENST00000546816 IL7P13232 177 aa-0.02□□□□□ -2.41
CCDC38-204ENST00000546816 CKS2P33552 79 aa-0.02□□□□□ -2.41
CCDC38-204ENST00000546816 S100A5P33763 92 aa-0.02□□□□□ -2.41
CCDC38-204ENST00000546816 TMEM128Q5BJH2 165 aa-0.02□□□□□ -2.41
CCDC38-204ENST00000546816 IDO2Q6ZQW0 420 aa-0.02□□□□□ -2.41
CCDC38-204ENST00000546816 CCDC115Q96NT0 180 aa-0.02□□□□□ -2.41
CCDC38-204ENST00000546816 ATG5Q9H1Y0 275 aa-0.02□□□□□ -2.41
CCDC38-204ENST00000546816 V9GYQ6 96 aa-0.02□□□□□ -2.41
CCDC38-204ENST00000546816 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.03□□□□□ -2.41
CCDC38-204ENST00000546816 CDK12Q9NYV4 1490 aaPredicted RBP-0.03□□□□□ -2.41
CCDC38-204ENST00000546816 MED23Q9ULK4 1368 aa-0.03□□□□□ -2.41
CCDC38-204ENST00000546816 IGHV1-24A0A0C4DH33 117 aa-0.03□□□□□ -2.41
CCDC38-204ENST00000546816 IFNA21P01568 189 aa-0.03□□□□□ -2.41
CCDC38-204ENST00000546816 SLC25A5P05141 298 aaKnown RBP-0.03□□□□□ -2.41
CCDC38-204ENST00000546816 OR4S1Q8NGB4 309 aa-0.03□□□□□ -2.41
CCDC38-204ENST00000546816 DDA1Q9BW61 102 aa-0.03□□□□□ -2.41
CCDC38-204ENST00000546816 PROK2Q9HC23 129 aa-0.03□□□□□ -2.41
CCDC38-204ENST00000546816 TMEM14BQ9NUH8 114 aa-0.03□□□□□ -2.41
CCDC38-204ENST00000546816 KDM6BO15054 1643 aa-0.03□□□□□ -2.41
CCDC38-204ENST00000546816 TPRP12270 2363 aaKnown RBP-0.03□□□□□ -2.41
CCDC38-204ENST00000546816 TRPM7Q96QT4 1865 aa-0.03□□□□□ -2.41
CCDC38-204ENST00000546816 ANK2Q01484 3957 aa-0.04□□□□□ -2.42
CCDC38-204ENST00000546816 DMBT1Q9UGM3 2413 aaPredicted RBP-0.04□□□□□ -2.42
CCDC38-204ENST00000546816 PBRM1Q86U86 1689 aa-0.04□□□□□ -2.42
CCDC38-204ENST00000546816 CCKP06307 115 aa-0.04□□□□□ -2.42
CCDC38-204ENST00000546816 ADCYAP1P18509 176 aa-0.04□□□□□ -2.42
CCDC38-204ENST00000546816 RPS28P62857 69 aaKnown RBP-0.04□□□□□ -2.42
CCDC38-204ENST00000546816 IQCJQ1A5X6 159 aa-0.04□□□□□ -2.42
CCDC38-204ENST00000546816 SAMD13Q5VXD3 122 aa-0.04□□□□□ -2.42
CCDC38-204ENST00000546816 FER1L6Q2WGJ9 1857 aa-0.04□□□□□ -2.42
CCDC38-204ENST00000546816 ATG2AQ2TAZ0 1938 aa-0.05□□□□□ -2.42
CCDC38-204ENST00000546816 TRBV10-1A0A0K0K1A3 114 aa-0.05□□□□□ -2.42
CCDC38-204ENST00000546816 PNMA8CA0A1B0GUJ8 204 aa-0.05□□□□□ -2.42
CCDC38-204ENST00000546816 CD3DP04234 171 aa-0.05□□□□□ -2.42
CCDC38-204ENST00000546816 TCRAP04437 139 aa-0.05□□□□□ -2.42
CCDC38-204ENST00000546816 MPC1LP0DKB6 136 aa-0.05□□□□□ -2.42
CCDC38-204ENST00000546816 VMO1Q7Z5L0 202 aa-0.05□□□□□ -2.42
CCDC38-204ENST00000546816 METTL1Q9UBP6 276 aaKnown RBP-0.05□□□□□ -2.42
CCDC38-204ENST00000546816 RBBP6Q7Z6E9 1792 aaKnown RBP-0.05□□□□□ -2.42
CCDC38-204ENST00000546816 KIDINS220Q9ULH0 1771 aa-0.05□□□□□ -2.42
CCDC38-204ENST00000546816 ARHGAP31Q2M1Z3 1444 aa-0.05□□□□□ -2.42
CCDC38-204ENST00000546816 PIEZO1Q92508 2521 aa-0.06□□□□□ -2.42
CCDC38-204ENST00000546816 CXorf51AA0A1B0GTR3 108 aa-0.06□□□□□ -2.42
CCDC38-204ENST00000546816 OR2H2O95918 312 aa-0.06□□□□□ -2.42
CCDC38-204ENST00000546816 PCBD1P61457 104 aa-0.06□□□□□ -2.42
CCDC38-204ENST00000546816 TMEM35BQ8NCS4 154 aa-0.06□□□□□ -2.42
CCDC38-204ENST00000546816 RREB1Q92766 1687 aa-0.06□□□□□ -2.42
CCDC38-204ENST00000546816 LRP5O75197 1615 aa-0.06□□□□□ -2.42
CCDC38-204ENST00000546816 AFDNP55196 1824 aaKnown RBP-0.06□□□□□ -2.42
CCDC38-204ENST00000546816 DLEC1Q9Y238 1755 aa-0.06□□□□□ -2.42
CCDC38-204ENST00000546816 S100GP29377 79 aa-0.07□□□□□ -2.42
CCDC38-204ENST00000546816 POLR2JP52435 117 aaKnown RBP-0.07□□□□□ -2.42
CCDC38-204ENST00000546816 PSPHP78330 225 aa-0.07□□□□□ -2.42
CCDC38-204ENST00000546816 HSD17B12Q53GQ0 312 aa-0.07□□□□□ -2.42
CCDC38-204ENST00000546816 UNQ5815/PRO19632Q6UWF5 114 aa-0.07□□□□□ -2.42
CCDC38-204ENST00000546816 OVOS2A0A0G2JMS6 1433 aa-0.07□□□□□ -2.42
CCDC38-204ENST00000546816 ESPL1Q14674 2120 aa-0.07□□□□□ -2.42
CCDC38-204ENST00000546816 TTC28Q96AY4 2481 aa-0.07□□□□□ -2.42
CCDC38-204ENST00000546816 TANC1Q9C0D5 1861 aa-0.07□□□□□ -2.42
CCDC38-204ENST00000546816 HRNRQ86YZ3 2850 aaPredicted RBP-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 ANKRD17O75179 2603 aaKnown RBP-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 TEX49A0A1B0GTD5 131 aa-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 J3KT08 172 aa-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 HIST1H1BP16401 226 aaKnown RBP-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 SDC4P31431 198 aa-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 PLGLB1Q02325 96 aa-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 EMX2Q04743 252 aa-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 TMEM91Q6ZNR0 172 aa-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 PPDPFLQ8WWR9 84 aa-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 SPRR2GQ9BYE4 73 aa-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 NDUFAF1Q9Y375 327 aa-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 ZFYVE26Q68DK2 2539 aa-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 OTOGQ6ZRI0 2925 aa-0.08□□□□□ -2.42
CCDC38-204ENST00000546816 DSTQ03001 7570 aaKnown RBP-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 NINQ8N4C6 2090 aa-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 ABCA12Q86UK0 2595 aa-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 A0A1B0GX51 115 aa-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 MCRIP1C9JLW8 97 aa-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 DPM2O94777 84 aa-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 PYYP10082 97 aa-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 SLC25A26Q70HW3 274 aa-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 SMIM15Q7Z3B0 74 aa-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 OR8I2Q8N0Y5 310 aa-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 SKA2Q8WVK7 121 aaPredicted RBP-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 DSCR8Q96T75 97 aa-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 DNAJC15Q9Y5T4 150 aa-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 JMJD1CQ15652 2540 aa-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 CACNA1HO95180 2353 aa-0.09□□□□□ -2.42
CCDC38-204ENST00000546816 ARAP1Q96P48 1450 aa-0.1□□□□□ -2.42
CCDC38-204ENST00000546816 MAP2P11137 1827 aaKnown RBP-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 MYH1P12882 1939 aa-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 TRAV12-2A0A075B6T6 113 aa-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 TRAV36DV7A0A075B6V5 113 aa-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 TRAV2A0A0B4J234 112 aa-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 MT-ND4LP03901 98 aa-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 SCTP09683 121 aa-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 NBEAP1P0C6P0 100 aa-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 AKR1D1P51857 326 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms