RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 FAM210BQ96KR6 192 aa11.92□□□□□ -0.5
CCDC38-203ENST00000546803 SPXQ9BT56 116 aa11.92□□□□□ -0.5
CCDC38-203ENST00000546803 IGLL5B9A064 214 aa11.91□□□□□ -0.5
CCDC38-203ENST00000546803 SPINK4O60575 86 aa11.91□□□□□ -0.5
CCDC38-203ENST00000546803 ATP5G1P05496 136 aa11.91□□□□□ -0.5
CCDC38-203ENST00000546803 BAGE2Q86Y30 109 aa11.91□□□□□ -0.5
CCDC38-203ENST00000546803 ZC2HC1AQ96GY0 325 aa11.91□□□□□ -0.5
CCDC38-203ENST00000546803 MDFICQ9P1T7 246 aa11.91□□□□□ -0.5
CCDC38-203ENST00000546803 TRGV1A0A0A0MS02 117 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 IGHV3-16A0A0C4DH30 117 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 GAGE12BA1L429 117 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 GNRH2O43555 120 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 GAGE7O76087 117 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 TYMSP04818 313 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 GAGE12FP0CL80 117 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 GAGE12GP0CL81 117 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 GAGE12IP0CL82 117 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 HTN3P15516 51 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 RPL35P42766 123 aaKnown RBP11.9□□□□□ -0.5
CCDC38-203ENST00000546803 FAM162BQ5T6X4 162 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 Q6ZTI0 123 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 C18orf15Q96N68 181 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 C11orf21Q9P2W6 132 aa11.9□□□□□ -0.5
CCDC38-203ENST00000546803 RBFOX3A6NFN3 312 aa11.89□□□□□ -0.51
CCDC38-203ENST00000546803 CRIP1P50238 77 aa11.89□□□□□ -0.51
CCDC38-203ENST00000546803 ZNF674Q2M3X9 581 aa11.89□□□□□ -0.51
CCDC38-203ENST00000546803 MLST8Q9BVC4 326 aa11.89□□□□□ -0.51
CCDC38-203ENST00000546803 MED9Q9NWA0 146 aa11.89□□□□□ -0.51
CCDC38-203ENST00000546803 TRGV2A0A075B6R0 118 aa11.88□□□□□ -0.51
CCDC38-203ENST00000546803 IGHV4-4A0A075B6R2 117 aa11.88□□□□□ -0.51
CCDC38-203ENST00000546803 SH2D1AO60880 128 aa11.88□□□□□ -0.51
CCDC38-203ENST00000546803 IGKV3D-20A0A0C4DH25 116 aa11.87□□□□□ -0.51
CCDC38-203ENST00000546803 F5H768 121 aa11.87□□□□□ -0.51
CCDC38-203ENST00000546803 ORM1P02763 201 aa11.87□□□□□ -0.51
CCDC38-203ENST00000546803 ZNF506Q5JVG8 444 aa11.87□□□□□ -0.51
CCDC38-203ENST00000546803 SMIM12Q96EX1 92 aa11.87□□□□□ -0.51
CCDC38-203ENST00000546803 DERL1Q9BUN8 251 aa11.87□□□□□ -0.51
CCDC38-203ENST00000546803 APLNQ9ULZ1 77 aa11.87□□□□□ -0.51
CCDC38-203ENST00000546803 LCE6AA0A183 80 aa11.86□□□□□ -0.51
CCDC38-203ENST00000546803 TMEM250H0YL14 139 aa11.86□□□□□ -0.51
CCDC38-203ENST00000546803 M0R2P5 195 aa11.86□□□□□ -0.51
CCDC38-203ENST00000546803 NDUFS6O75380 124 aaKnown RBP11.86□□□□□ -0.51
CCDC38-203ENST00000546803 CENPWQ5EE01 88 aa11.86□□□□□ -0.51
CCDC38-203ENST00000546803 NHLRC2Q8NBF2 726 aa11.86□□□□□ -0.51
CCDC38-203ENST00000546803 RASL10AQ92737 203 aa11.86□□□□□ -0.51
CCDC38-203ENST00000546803 NDUFAF3Q9BU61 184 aa11.86□□□□□ -0.51
CCDC38-203ENST00000546803 MRPL16Q9NX20 251 aaKnown RBP11.86□□□□□ -0.51
CCDC38-203ENST00000546803 B4DEV8 164 aa11.85□□□□□ -0.51
CCDC38-203ENST00000546803 GNG4P50150 75 aa11.85□□□□□ -0.51
CCDC38-203ENST00000546803 FAM210AQ96ND0 272 aa11.85□□□□□ -0.51
CCDC38-203ENST00000546803 KRBOX1C9JBD0 128 aa11.84□□□□□ -0.51
CCDC38-203ENST00000546803 S100A4P26447 101 aaKnown RBP11.84□□□□□ -0.51
CCDC38-203ENST00000546803 ASIPP42127 132 aa11.84□□□□□ -0.51
CCDC38-203ENST00000546803 LINC01559Q495D7 138 aa11.84□□□□□ -0.51
CCDC38-203ENST00000546803 TMEM88Q6PEY1 159 aa11.84□□□□□ -0.51
CCDC38-203ENST00000546803 C9orf85Q96MD7 179 aa11.84□□□□□ -0.51
CCDC38-203ENST00000546803 EIF5A2Q9GZV4 153 aaKnown RBP11.84□□□□□ -0.51
CCDC38-203ENST00000546803 DNAH7Q8WXX0 4024 aa11.83□□□□□ -0.51
CCDC38-203ENST00000546803 RAB19A4D1S5 217 aa11.83□□□□□ -0.52
CCDC38-203ENST00000546803 M0R036 132 aa11.83□□□□□ -0.52
CCDC38-203ENST00000546803 RNASE3P12724 160 aaKnown RBP11.83□□□□□ -0.52
CCDC38-203ENST00000546803 TOR2AQ5JU69 321 aa11.83□□□□□ -0.52
CCDC38-203ENST00000546803 DNLZQ5SXM8 178 aa11.83□□□□□ -0.52
CCDC38-203ENST00000546803 C15orf53Q8NAA6 179 aa11.83□□□□□ -0.52
CCDC38-203ENST00000546803 PTH2Q96A98 100 aa11.83□□□□□ -0.52
CCDC38-203ENST00000546803 BIN3Q9NQY0 253 aa11.83□□□□□ -0.52
CCDC38-203ENST00000546803 IGLV2-8P01709 118 aa11.82□□□□□ -0.52
CCDC38-203ENST00000546803 OR5I1Q13606 314 aa11.82□□□□□ -0.52
CCDC38-203ENST00000546803 LINC00476Q8WZB0 136 aa11.82□□□□□ -0.52
CCDC38-203ENST00000546803 IL36BQ9NZH7 164 aa11.82□□□□□ -0.52
CCDC38-203ENST00000546803 C9JCJ5 164 aa11.81□□□□□ -0.52
CCDC38-203ENST00000546803 LGALS9CQ6DKI2 356 aa11.81□□□□□ -0.52
CCDC38-203ENST00000546803 PRR27Q6MZM9 219 aa11.81□□□□□ -0.52
CCDC38-203ENST00000546803 TRBV20OR9-2A0A075B6H5 130 aa11.8□□□□□ -0.52
CCDC38-203ENST00000546803 CXCL1P09341 107 aa11.8□□□□□ -0.52
CCDC38-203ENST00000546803 MGST1P10620 155 aaKnown RBP11.8□□□□□ -0.52
CCDC38-203ENST00000546803 HOXA5P20719 270 aa11.8□□□□□ -0.52
CCDC38-203ENST00000546803 SLAQ13239 276 aa11.8□□□□□ -0.52
CCDC38-203ENST00000546803 ZNF876PQ49A33 203 aa11.8□□□□□ -0.52
CCDC38-203ENST00000546803 PIK3CD-AS1Q5SR53 167 aa11.8□□□□□ -0.52
CCDC38-203ENST00000546803 PCNPQ8WW12 178 aaKnown RBP11.8□□□□□ -0.52
CCDC38-203ENST00000546803 PARLQ9H300 379 aa11.8□□□□□ -0.52
CCDC38-203ENST00000546803 TRAV4A0A0B4J268 109 aa11.79□□□□□ -0.52
CCDC38-203ENST00000546803 H3BNG1 76 aa11.79□□□□□ -0.52
CCDC38-203ENST00000546803 LY6G6CO95867 125 aa11.79□□□□□ -0.52
CCDC38-203ENST00000546803 DAZAP1Q96EP5 407 aaKnown RBP11.79□□□□□ -0.52
CCDC38-203ENST00000546803 TRAV26-1A0A087WT03 109 aa11.78□□□□□ -0.52
CCDC38-203ENST00000546803 TMSB15BA0A087X1C1 80 aa11.78□□□□□ -0.52
CCDC38-203ENST00000546803 GRIFINA4D1Z8 144 aa11.78□□□□□ -0.52
CCDC38-203ENST00000546803 H3BVH4 76 aa11.78□□□□□ -0.52
CCDC38-203ENST00000546803 CIDEAO60543 219 aa11.78□□□□□ -0.52
CCDC38-203ENST00000546803 IGHV3-53P01767 116 aa11.78□□□□□ -0.52
CCDC38-203ENST00000546803 ARMS2P0C7Q2 107 aa11.78□□□□□ -0.52
CCDC38-203ENST00000546803 MED14OSP0DP75 135 aa11.78□□□□□ -0.52
CCDC38-203ENST00000546803 RAB14P61106 215 aa11.78□□□□□ -0.52
CCDC38-203ENST00000546803 ZNF575Q86XF7 245 aa11.78□□□□□ -0.52
CCDC38-203ENST00000546803 OR4C5Q8NGB2 326 aa11.78□□□□□ -0.52
CCDC38-203ENST00000546803 SMDT1Q9H4I9 107 aa11.78□□□□□ -0.52
CCDC38-203ENST00000546803 TRGV4A0A0C4DH28 118 aa11.77□□□□□ -0.53
CCDC38-203ENST00000546803 PGPEP1LA6NFU8 196 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms